RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 SNRNP70P08621 437 aaKnown RBP8.4□□□□□ -1.06
LRRC28-204ENST00000558172 ZNF735P0CB33 412 aa8.4□□□□□ -1.06
LRRC28-204ENST00000558172 RRASP10301 218 aa8.4□□□□□ -1.06
LRRC28-204ENST00000558172 IL7P13232 177 aa8.4□□□□□ -1.06
LRRC28-204ENST00000558172 S100GP29377 79 aa8.4□□□□□ -1.06
LRRC28-204ENST00000558172 GNRHRP30968 328 aa8.4□□□□□ -1.06
LRRC28-204ENST00000558172 RIPPLY3P57055 190 aa8.4□□□□□ -1.06
LRRC28-204ENST00000558172 CBX3Q13185 183 aa8.4□□□□□ -1.06
LRRC28-204ENST00000558172 HES1Q14469 280 aa8.4□□□□□ -1.06
LRRC28-204ENST00000558172 LY6EQ16553 131 aa8.4□□□□□ -1.06
LRRC28-204ENST00000558172 SCGB2B2Q4G0G5 96 aa8.4□□□□□ -1.06
LRRC28-204ENST00000558172 AADACL3Q5VUY0 350 aa8.4□□□□□ -1.06
LRRC28-204ENST00000558172 CMTM1Q8IZ96 169 aa8.4□□□□□ -1.06
LRRC28-204ENST00000558172 SLC38A6Q8IZM9 456 aa8.4□□□□□ -1.06
LRRC28-204ENST00000558172 BVESQ8NE79 360 aa8.4□□□□□ -1.06
LRRC28-204ENST00000558172 OR8H1Q8NGG4 311 aa8.4□□□□□ -1.06
LRRC28-204ENST00000558172 ZFAND1Q8TCF1 268 aa8.4□□□□□ -1.06
LRRC28-204ENST00000558172 ZNF486Q96H40 463 aaPredicted RBP8.4□□□□□ -1.06
LRRC28-204ENST00000558172 EAF1Q96JC9 268 aaPredicted RBP8.4□□□□□ -1.06
LRRC28-204ENST00000558172 SCGB3A2Q96PL1 93 aa8.4□□□□□ -1.06
LRRC28-204ENST00000558172 RNF5Q99942 180 aa8.4□□□□□ -1.06
LRRC28-204ENST00000558172 C7orf50Q9BRJ6 194 aaKnown RBP8.4□□□□□ -1.06
LRRC28-204ENST00000558172 RSRP1Q9BUV0 290 aa8.4□□□□□ -1.06
LRRC28-204ENST00000558172 CHIAQ9BZP6 476 aa8.4□□□□□ -1.06
LRRC28-204ENST00000558172 FXYD6Q9H0Q3 95 aa8.4□□□□□ -1.06
LRRC28-204ENST00000558172 HRASLSQ9HDD0 168 aa8.4□□□□□ -1.06
LRRC28-204ENST00000558172 TNFRSF19Q9NS68 423 aa8.4□□□□□ -1.06
LRRC28-204ENST00000558172 WASHC3Q9Y3C0 194 aa8.4□□□□□ -1.06
LRRC28-204ENST00000558172 ATRQ13535 2644 aa8.4□□□□□ -1.07
LRRC28-204ENST00000558172 IGHV3-72A0A0B4J1Y9 119 aa8.39□□□□□ -1.07
LRRC28-204ENST00000558172 RNF212BA8MTL3 300 aa8.39□□□□□ -1.07
LRRC28-204ENST00000558172 H0YJW9 148 aa8.39□□□□□ -1.07
LRRC28-204ENST00000558172 H7C2Y5 167 aa8.39□□□□□ -1.07
LRRC28-204ENST00000558172 GPR137BO60478 399 aa8.39□□□□□ -1.07
LRRC28-204ENST00000558172 OR2F2O95006 317 aa8.39□□□□□ -1.07
LRRC28-204ENST00000558172 CRYBA1P05813 215 aa8.39□□□□□ -1.07
LRRC28-204ENST00000558172 TMEM11P17152 192 aa8.39□□□□□ -1.07
LRRC28-204ENST00000558172 CD24P25063 80 aa8.39□□□□□ -1.07
LRRC28-204ENST00000558172 CATR1Q13166 79 aa8.39□□□□□ -1.07
LRRC28-204ENST00000558172 SURF2Q15527 256 aaPredicted RBP8.39□□□□□ -1.07
LRRC28-204ENST00000558172 GLDNQ6ZMI3 551 aaPredicted RBP8.39□□□□□ -1.07
LRRC28-204ENST00000558172 ZNF818PQ6ZRF7 136 aa8.39□□□□□ -1.07
LRRC28-204ENST00000558172 PRIMA1Q86XR5 153 aa8.39□□□□□ -1.07
LRRC28-204ENST00000558172 PDPNQ86YL7 162 aa8.39□□□□□ -1.07
LRRC28-204ENST00000558172 ZNF383Q8NA42 475 aa8.39□□□□□ -1.07
LRRC28-204ENST00000558172 DRAXINQ8NBI3 349 aaPredicted RBP8.39□□□□□ -1.07
LRRC28-204ENST00000558172 OR51S1Q8NGJ8 323 aa8.39□□□□□ -1.07
LRRC28-204ENST00000558172 RBM14Q96PK6 669 aaKnown RBP8.39□□□□□ -1.07
LRRC28-204ENST00000558172 DUX5Q96PT3 197 aa8.39□□□□□ -1.07
LRRC28-204ENST00000558172 SLC35D1Q9NTN3 355 aa8.39□□□□□ -1.07
LRRC28-204ENST00000558172 MCUBQ9NWR8 336 aa8.39□□□□□ -1.07
LRRC28-204ENST00000558172 C1RLQ9NZP8 487 aa8.39□□□□□ -1.07
LRRC28-204ENST00000558172 PRELID3BQ9Y3B1 194 aa8.39□□□□□ -1.07
LRRC28-204ENST00000558172 LINC00473A8K010 186 aa8.38□□□□□ -1.07
LRRC28-204ENST00000558172 M0QZK8 103 aa8.38□□□□□ -1.07
LRRC28-204ENST00000558172 PGAM2P15259 253 aa8.38□□□□□ -1.07
LRRC28-204ENST00000558172 KIR2DS2P43631 304 aa8.38□□□□□ -1.07
LRRC28-204ENST00000558172 EIF4EBP1Q13541 118 aaPredicted RBP8.38□□□□□ -1.07
LRRC28-204ENST00000558172 RTL8BQ17RB0 113 aa8.38□□□□□ -1.07
LRRC28-204ENST00000558172 DHRS7BQ6IAN0 325 aaPredicted RBP8.38□□□□□ -1.07
LRRC28-204ENST00000558172 FAAP20Q6NZ36 180 aa8.38□□□□□ -1.07
LRRC28-204ENST00000558172 CCBE1Q6UXH8 406 aaPredicted RBP8.38□□□□□ -1.07
LRRC28-204ENST00000558172 IDO2Q6ZQW0 420 aa8.38□□□□□ -1.07
LRRC28-204ENST00000558172 KCTD9Q7L273 389 aa8.38□□□□□ -1.07
LRRC28-204ENST00000558172 Q8N6K4 173 aa8.38□□□□□ -1.07
LRRC28-204ENST00000558172 TCTEX1D1Q8N7M0 179 aa8.38□□□□□ -1.07
LRRC28-204ENST00000558172 OR4C13Q8NGP0 309 aa8.38□□□□□ -1.07
LRRC28-204ENST00000558172 DDB2Q92466 427 aa8.38□□□□□ -1.07
LRRC28-204ENST00000558172 FLYWCH2Q96CP2 140 aaKnown RBP8.38□□□□□ -1.07
LRRC28-204ENST00000558172 C5orf30Q96GV9 206 aa8.38□□□□□ -1.07
LRRC28-204ENST00000558172 SLC25A21Q9BQT8 299 aaPredicted RBP8.38□□□□□ -1.07
LRRC28-204ENST00000558172 SLC25A33Q9BSK2 321 aa8.38□□□□□ -1.07
LRRC28-204ENST00000558172 FAM181BA6NEQ2 426 aa8.37□□□□□ -1.07
LRRC28-204ENST00000558172 FGF16O43320 207 aa8.37□□□□□ -1.07
LRRC28-204ENST00000558172 PGLYRP1O75594 196 aaPredicted RBP8.37□□□□□ -1.07
LRRC28-204ENST00000558172 CTSDP07339 412 aaPredicted RBP8.37□□□□□ -1.07
LRRC28-204ENST00000558172 LGALS7P47929 136 aa8.37□□□□□ -1.07
LRRC28-204ENST00000558172 RND3P61587 244 aa8.37□□□□□ -1.07
LRRC28-204ENST00000558172 RPL30P62888 115 aaKnown RBP8.37□□□□□ -1.07
LRRC28-204ENST00000558172 HNF4GQ14541 408 aa8.37□□□□□ -1.07
LRRC28-204ENST00000558172 ABCA11PQ4W5N1 156 aa8.37□□□□□ -1.07
LRRC28-204ENST00000558172 TMEM177Q53S58 311 aa8.37□□□□□ -1.07
LRRC28-204ENST00000558172 TMEM219Q86XT9 240 aa8.37□□□□□ -1.07
LRRC28-204ENST00000558172 CCDC71LQ8N9Z2 235 aa8.37□□□□□ -1.07
LRRC28-204ENST00000558172 POC5Q8NA72 575 aa8.37□□□□□ -1.07
LRRC28-204ENST00000558172 OR13C8Q8NGS7 320 aa8.37□□□□□ -1.07
LRRC28-204ENST00000558172 MARCH1Q8TCQ1 289 aa8.37□□□□□ -1.07
LRRC28-204ENST00000558172 CD300LFQ8TDQ1 290 aa8.37□□□□□ -1.07
LRRC28-204ENST00000558172 TCTEX1D2Q8WW35 142 aa8.37□□□□□ -1.07
LRRC28-204ENST00000558172 NPFFR1Q9GZQ6 430 aa8.37□□□□□ -1.07
LRRC28-204ENST00000558172 RANBP3Q9H6Z4 567 aaPredicted RBP8.37□□□□□ -1.07
LRRC28-204ENST00000558172 GPR132Q9UNW8 380 aa8.37□□□□□ -1.07
LRRC28-204ENST00000558172 C14orf166Q9Y224 244 aaKnown RBP8.37□□□□□ -1.07
LRRC28-204ENST00000558172 MOB4Q9Y3A3 225 aa8.37□□□□□ -1.07
LRRC28-204ENST00000558172 PLXNB1O43157 2135 aa8.36□□□□□ -1.07
LRRC28-204ENST00000558172 TNCP24821 2201 aa8.36□□□□□ -1.07
LRRC28-204ENST00000558172 NCBP2LA6PVI3 153 aaKnown RBP8.36□□□□□ -1.07
LRRC28-204ENST00000558172 RBFOX2O43251 390 aaKnown RBP eCLIP8.36□□□□□ -1.07
LRRC28-204ENST00000558172 TNFSF12O43508 249 aa8.36□□□□□ -1.07
LRRC28-204ENST00000558172 FCGR3BO75015 233 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms