RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 C11orf94C9JXX5 98 aa10.38□□□□□ -0.75
LDLR-205ENST00000557933 SRD5A2P31213 254 aa10.38□□□□□ -0.75
LDLR-205ENST00000557933 DUSP3P51452 185 aaPredicted RBP10.38□□□□□ -0.75
LDLR-205ENST00000557933 SLC10A1Q14973 349 aa10.38□□□□□ -0.75
LDLR-205ENST00000557933 WDR86Q86TI4 376 aa10.38□□□□□ -0.75
LDLR-205ENST00000557933 OR8G5Q8NG78 346 aa10.38□□□□□ -0.75
LDLR-205ENST00000557933 C5orf30Q96GV9 206 aa10.38□□□□□ -0.75
LDLR-205ENST00000557933 GJE1A6NN92 205 aa10.38□□□□□ -0.75
LDLR-205ENST00000557933 ANKRD30BLA7E2S9 258 aa10.38□□□□□ -0.75
LDLR-205ENST00000557933 SLC17A3O00476 420 aa10.38□□□□□ -0.75
LDLR-205ENST00000557933 PSPNO60542 156 aa10.38□□□□□ -0.75
LDLR-205ENST00000557933 ZNF25P17030 456 aaPredicted RBP10.38□□□□□ -0.75
LDLR-205ENST00000557933 IL3RAP26951 378 aa10.38□□□□□ -0.75
LDLR-205ENST00000557933 SSTP61278 116 aa10.38□□□□□ -0.75
LDLR-205ENST00000557933 TRIM61Q5EBN2 209 aa10.38□□□□□ -0.75
LDLR-205ENST00000557933 CYP2G1PQ6ZSU1 146 aa10.38□□□□□ -0.75
LDLR-205ENST00000557933 OR2Y1Q8NGV0 311 aa10.38□□□□□ -0.75
LDLR-205ENST00000557933 MRGPRDQ8TDS7 321 aa10.38□□□□□ -0.75
LDLR-205ENST00000557933 SF3B5Q9BWJ5 86 aaKnown RBP10.38□□□□□ -0.75
LDLR-205ENST00000557933 PAM16Q9Y3D7 125 aa10.38□□□□□ -0.75
LDLR-205ENST00000557933 ODAMA1E959 279 aa10.37□□□□□ -0.75
LDLR-205ENST00000557933 NXPH2O95156 264 aa10.37□□□□□ -0.75
LDLR-205ENST00000557933 CBLN1P23435 193 aa10.37□□□□□ -0.75
LDLR-205ENST00000557933 SSTR5P35346 364 aa10.37□□□□□ -0.75
LDLR-205ENST00000557933 SSMEM1Q8WWF3 244 aa10.37□□□□□ -0.75
LDLR-205ENST00000557933 MBD3L1Q8WWY6 194 aa10.37□□□□□ -0.75
LDLR-205ENST00000557933 FAM103A1Q9BTL3 118 aaKnown RBP10.37□□□□□ -0.75
LDLR-205ENST00000557933 RBFOX2O43251 390 aaKnown RBP eCLIP10.37□□□□□ -0.75
LDLR-205ENST00000557933 IFNA1P01562 189 aa10.37□□□□□ -0.75
LDLR-205ENST00000557933 TNFRSF9Q07011 255 aa10.37□□□□□ -0.75
LDLR-205ENST00000557933 GCNT2Q8N0V5 402 aa10.37□□□□□ -0.75
LDLR-205ENST00000557933 OR5A2Q8NGI9 324 aa10.37□□□□□ -0.75
LDLR-205ENST00000557933 NDUFAF3Q9BU61 184 aa10.37□□□□□ -0.75
LDLR-205ENST00000557933 OR2J1Q9GZK6 312 aa10.37□□□□□ -0.75
LDLR-205ENST00000557933 HRASP01112 189 aa10.37□□□□□ -0.75
LDLR-205ENST00000557933 TFPI2P48307 235 aa10.37□□□□□ -0.75
LDLR-205ENST00000557933 CYB561P49447 251 aa10.37□□□□□ -0.75
LDLR-205ENST00000557933 TRA2AQ13595 282 aaKnown RBP eCLIP10.37□□□□□ -0.75
LDLR-205ENST00000557933 EDDM3AQ14507 147 aa10.37□□□□□ -0.75
LDLR-205ENST00000557933 TRAPPC1Q9Y5R8 145 aa10.37□□□□□ -0.75
LDLR-205ENST00000557933 TRAV1-1A0A0B4J248 108 aa10.36□□□□□ -0.75
LDLR-205ENST00000557933 FOSL1P15407 271 aa10.36□□□□□ -0.75
LDLR-205ENST00000557933 FKBP2P26885 142 aaKnown RBP10.36□□□□□ -0.75
LDLR-205ENST00000557933 GABRA2P47869 451 aa10.36□□□□□ -0.75
LDLR-205ENST00000557933 ABLIM2Q6H8Q1 611 aa10.36□□□□□ -0.75
LDLR-205ENST00000557933 TOMM20LQ6UXN7 152 aa10.36□□□□□ -0.75
LDLR-205ENST00000557933 SGMS2Q8NHU3 365 aa10.36□□□□□ -0.75
LDLR-205ENST00000557933 SPSB4Q96A44 273 aa10.36□□□□□ -0.75
LDLR-205ENST00000557933 PRDM14Q9GZV8 571 aa10.36□□□□□ -0.75
LDLR-205ENST00000557933 SH2D2AQ9NP31 389 aa10.36□□□□□ -0.75
LDLR-205ENST00000557933 B4E171 279 aa10.36□□□□□ -0.75
LDLR-205ENST00000557933 TSPAN7P41732 249 aa10.36□□□□□ -0.75
LDLR-205ENST00000557933 PPP1R32Q7Z5V6 425 aa10.36□□□□□ -0.75
LDLR-205ENST00000557933 SNIP1Q8TAD8 396 aaKnown RBP10.36□□□□□ -0.75
LDLR-205ENST00000557933 APOBEC3DQ96AK3 386 aaPredicted RBP10.36□□□□□ -0.75
LDLR-205ENST00000557933 METRNQ9UJH8 293 aa10.36□□□□□ -0.75
LDLR-205ENST00000557933 POLR3KQ9Y2Y1 108 aaPredicted RBP10.36□□□□□ -0.75
LDLR-205ENST00000557933 TTC28Q96AY4 2481 aa10.36□□□□□ -0.75
LDLR-205ENST00000557933 BDP1A6H8Y1 2624 aa10.36□□□□□ -0.75
LDLR-205ENST00000557933 TRBV20OR9-2A0A075B6H5 130 aa10.35□□□□□ -0.75
LDLR-205ENST00000557933 LOC102723996A0A087X1L8 192 aa10.35□□□□□ -0.75
LDLR-205ENST00000557933 SLC25A6P12236 298 aa10.35□□□□□ -0.75
LDLR-205ENST00000557933 CDKN1AP38936 164 aa10.35□□□□□ -0.75
LDLR-205ENST00000557933 GNB1P62873 340 aa10.35□□□□□ -0.75
LDLR-205ENST00000557933 KRTAP27-1Q3LI81 207 aa10.35□□□□□ -0.75
LDLR-205ENST00000557933 KIAA1644Q3SXP7 199 aa10.35□□□□□ -0.75
LDLR-205ENST00000557933 FAM122AQ96E09 287 aa10.35□□□□□ -0.75
LDLR-205ENST00000557933 TBX15Q96SF7 602 aa10.35□□□□□ -0.75
LDLR-205ENST00000557933 NPCDR1Q9BY65 106 aa10.35□□□□□ -0.75
LDLR-205ENST00000557933 MRPL37Q9BZE1 423 aaKnown RBP10.35□□□□□ -0.75
LDLR-205ENST00000557933 FKBP11Q9NYL4 201 aa10.35□□□□□ -0.75
LDLR-205ENST00000557933 PLXNB1O43157 2135 aa10.35□□□□□ -0.75
LDLR-205ENST00000557933 NTN3O00634 580 aaPredicted RBP10.35□□□□□ -0.75
LDLR-205ENST00000557933 SERPINA7P05543 415 aa10.35□□□□□ -0.75
LDLR-205ENST00000557933 ACP1P24666 158 aa10.35□□□□□ -0.75
LDLR-205ENST00000557933 CNN1P51911 297 aaKnown RBP10.35□□□□□ -0.75
LDLR-205ENST00000557933 COLCA1Q6ZS62 124 aa10.35□□□□□ -0.75
LDLR-205ENST00000557933 TIPARPQ7Z3E1 657 aaKnown RBP10.35□□□□□ -0.75
LDLR-205ENST00000557933 SCCPDHQ8NBX0 429 aa10.35□□□□□ -0.75
LDLR-205ENST00000557933 OR5R1Q8NH85 324 aa10.35□□□□□ -0.75
LDLR-205ENST00000557933 DTD1Q8TEA8 209 aa10.35□□□□□ -0.75
LDLR-205ENST00000557933 MS4A10Q96PG2 267 aa10.35□□□□□ -0.75
LDLR-205ENST00000557933 BRWD1-AS2P59051 145 aa10.34□□□□□ -0.75
LDLR-205ENST00000557933 NUTF2P61970 127 aaKnown RBP10.34□□□□□ -0.75
LDLR-205ENST00000557933 GNG3P63215 75 aa10.34□□□□□ -0.75
LDLR-205ENST00000557933 PLP2Q04941 152 aa10.34□□□□□ -0.75
LDLR-205ENST00000557933 Q6ZR03 302 aa10.34□□□□□ -0.75
LDLR-205ENST00000557933 ZNF709Q8N972 641 aa10.34□□□□□ -0.75
LDLR-205ENST00000557933 OR10P1Q8NGE3 313 aa10.34□□□□□ -0.75
LDLR-205ENST00000557933 LEAP2Q969E1 77 aa10.34□□□□□ -0.75
LDLR-205ENST00000557933 TMEM18Q96B42 140 aa10.34□□□□□ -0.75
LDLR-205ENST00000557933 APH1AQ96BI3 265 aa10.34□□□□□ -0.75
LDLR-205ENST00000557933 POM121L2Q96KW2 1035 aa10.34□□□□□ -0.75
LDLR-205ENST00000557933 DEFB127Q9H1M4 99 aa10.34□□□□□ -0.75
LDLR-205ENST00000557933 OR6C3Q9NZP0 311 aa10.34□□□□□ -0.75
LDLR-205ENST00000557933 LINC00473A8K010 186 aa10.34□□□□□ -0.75
LDLR-205ENST00000557933 CYC1P08574 325 aa10.34□□□□□ -0.75
LDLR-205ENST00000557933 CTXN2P0C2S0 81 aa10.34□□□□□ -0.75
LDLR-205ENST00000557933 ADMP35318 185 aa10.34□□□□□ -0.75
LDLR-205ENST00000557933 SERF2P84101 59 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms