RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 RAB29O14966 203 aa9.92□□□□□ -0.82
VIPAS39-211ENST00000557658 RBMXL2O75526 392 aaKnown RBP9.92□□□□□ -0.82
VIPAS39-211ENST00000557658 MT-CO3P00414 261 aa9.92□□□□□ -0.82
VIPAS39-211ENST00000557658 ERVFC1-1P60608 527 aa9.92□□□□□ -0.82
VIPAS39-211ENST00000557658 RPS16P62249 146 aaKnown RBP9.92□□□□□ -0.82
VIPAS39-211ENST00000557658 TMEM144Q7Z5S9 345 aa9.92□□□□□ -0.82
VIPAS39-211ENST00000557658 WDR86Q86TI4 376 aa9.92□□□□□ -0.82
VIPAS39-211ENST00000557658 MCEMP1Q8IX19 187 aa9.92□□□□□ -0.82
VIPAS39-211ENST00000557658 ZNF808Q8N4W9 903 aaPredicted RBP9.92□□□□□ -0.82
VIPAS39-211ENST00000557658 OR1L1Q8NH94 360 aa9.92□□□□□ -0.82
VIPAS39-211ENST00000557658 ZDHHC16Q969W1 377 aa9.92□□□□□ -0.82
VIPAS39-211ENST00000557658 GALMQ96C23 342 aa9.92□□□□□ -0.82
VIPAS39-211ENST00000557658 WDYHV1Q96HA8 205 aa9.92□□□□□ -0.82
VIPAS39-211ENST00000557658 DOCK7Q96N67 2140 aa9.92□□□□□ -0.82
VIPAS39-211ENST00000557658 TMEM30CPA0ZSE6 113 aa9.92□□□□□ -0.82
VIPAS39-211ENST00000557658 CLDN14O95500 239 aa9.92□□□□□ -0.82
VIPAS39-211ENST00000557658 GNB1P62873 340 aa9.92□□□□□ -0.82
VIPAS39-211ENST00000557658 FOXL1Q12952 345 aa9.92□□□□□ -0.82
VIPAS39-211ENST00000557658 SSPNQ14714 243 aa9.92□□□□□ -0.82
VIPAS39-211ENST00000557658 C1orf194Q5T5A4 169 aa9.92□□□□□ -0.82
VIPAS39-211ENST00000557658 PMS2CLQ68D20 193 aa9.92□□□□□ -0.82
VIPAS39-211ENST00000557658 TEX38Q6PEX7 206 aa9.92□□□□□ -0.82
VIPAS39-211ENST00000557658 H2BFWTQ7Z2G1 175 aa9.92□□□□□ -0.82
VIPAS39-211ENST00000557658 NANOS1Q8WY41 292 aaKnown RBP9.92□□□□□ -0.82
VIPAS39-211ENST00000557658 DIRC2Q96SL1 478 aa9.92□□□□□ -0.82
VIPAS39-211ENST00000557658 KCNIP2Q9NS61 270 aa9.92□□□□□ -0.82
VIPAS39-211ENST00000557658 PLA2G3Q9NZ20 509 aa9.92□□□□□ -0.82
VIPAS39-211ENST00000557658 PXMP4Q9Y6I8 212 aa9.92□□□□□ -0.82
VIPAS39-211ENST00000557658 KMT2EQ8IZD2 1858 aa9.92□□□□□ -0.82
VIPAS39-211ENST00000557658 F6UZH7 168 aa9.91□□□□□ -0.82
VIPAS39-211ENST00000557658 M0R143 59 aa9.91□□□□□ -0.82
VIPAS39-211ENST00000557658 CRYAAP02489 173 aa9.91□□□□□ -0.82
VIPAS39-211ENST00000557658 OR3A1P47881 315 aa9.91□□□□□ -0.82
VIPAS39-211ENST00000557658 EIF4EBP1Q13541 118 aaPredicted RBP9.91□□□□□ -0.82
VIPAS39-211ENST00000557658 CST9LP1Q5W188 147 aa9.91□□□□□ -0.82
VIPAS39-211ENST00000557658 TCTEX1D1Q8N7M0 179 aa9.91□□□□□ -0.82
VIPAS39-211ENST00000557658 SNHG12Q9BXW3 62 aa9.91□□□□□ -0.82
VIPAS39-211ENST00000557658 C17orf98A8MV24 154 aa9.91□□□□□ -0.82
VIPAS39-211ENST00000557658 CDIPTO14735 213 aa9.91□□□□□ -0.82
VIPAS39-211ENST00000557658 DEFA4P12838 97 aa9.91□□□□□ -0.82
VIPAS39-211ENST00000557658 OR10J1P30954 320 aa9.91□□□□□ -0.82
VIPAS39-211ENST00000557658 TMEM249Q2WGJ8 235 aa9.91□□□□□ -0.82
VIPAS39-211ENST00000557658 FIP1L1Q6UN15 594 aaKnown RBP9.91□□□□□ -0.82
VIPAS39-211ENST00000557658 RAB1CQ92928 201 aa9.91□□□□□ -0.82
VIPAS39-211ENST00000557658 NINJ1Q92982 152 aa9.91□□□□□ -0.82
VIPAS39-211ENST00000557658 C5orf30Q96GV9 206 aa9.91□□□□□ -0.82
VIPAS39-211ENST00000557658 THOC3Q96J01 351 aaKnown RBP9.91□□□□□ -0.82
VIPAS39-211ENST00000557658 WFIKKN1Q96NZ8 548 aa9.91□□□□□ -0.82
VIPAS39-211ENST00000557658 TAAR6Q96RI8 345 aa9.91□□□□□ -0.82
VIPAS39-211ENST00000557658 NAGKQ9UJ70 344 aa9.91□□□□□ -0.82
VIPAS39-211ENST00000557658 A0A1W2PPV4 95 aa9.9□□□□□ -0.82
VIPAS39-211ENST00000557658 FAM166BA8MTA8 275 aa9.9□□□□□ -0.82
VIPAS39-211ENST00000557658 C12orf77C9JDV5 145 aa9.9□□□□□ -0.82
VIPAS39-211ENST00000557658 SOX15O60248 233 aa9.9□□□□□ -0.82
VIPAS39-211ENST00000557658 NDUFB4O95168 129 aa9.9□□□□□ -0.82
VIPAS39-211ENST00000557658 HAND1O96004 215 aa9.9□□□□□ -0.82
VIPAS39-211ENST00000557658 EGR1P18146 543 aa9.9□□□□□ -0.82
VIPAS39-211ENST00000557658 ATP5G3P48201 142 aa9.9□□□□□ -0.82
VIPAS39-211ENST00000557658 UBE2G2P60604 165 aa9.9□□□□□ -0.82
VIPAS39-211ENST00000557658 DCAF12Q5T6F0 453 aa9.9□□□□□ -0.82
VIPAS39-211ENST00000557658 CT55Q8WUE5 264 aa9.9□□□□□ -0.82
VIPAS39-211ENST00000557658 GP6Q9HCN6 339 aa9.9□□□□□ -0.82
VIPAS39-211ENST00000557658 R4GN57 208 aa9.9□□□□□ -0.82
VIPAS39-211ENST00000557658 DNAJC13O75165 2243 aa9.9□□□□□ -0.82
VIPAS39-211ENST00000557658 KIR2DL5BA0A0G2JN68 375 aa9.9□□□□□ -0.82
VIPAS39-211ENST00000557658 KIR2DL5BA0A0G2JPC4 375 aa9.9□□□□□ -0.82
VIPAS39-211ENST00000557658 MDFIC2A0A1B0GVS7 189 aa9.9□□□□□ -0.82
VIPAS39-211ENST00000557658 GALR2O43603 387 aaPredicted RBP9.9□□□□□ -0.82
VIPAS39-211ENST00000557658 NEURL1O76050 574 aa9.9□□□□□ -0.82
VIPAS39-211ENST00000557658 MAGEA5P43359 124 aa9.9□□□□□ -0.82
VIPAS39-211ENST00000557658 TBC1D28Q2M2D7 210 aa9.9□□□□□ -0.82
VIPAS39-211ENST00000557658 MDP1Q86V88 176 aa9.9□□□□□ -0.82
VIPAS39-211ENST00000557658 KIR2DL5AQ8N109 375 aa9.9□□□□□ -0.82
VIPAS39-211ENST00000557658 OR52L2PQ8NGH6 319 aa9.9□□□□□ -0.82
VIPAS39-211ENST00000557658 MS4A10Q96PG2 267 aa9.9□□□□□ -0.82
VIPAS39-211ENST00000557658 CBLN4Q9NTU7 201 aa9.9□□□□□ -0.82
VIPAS39-211ENST00000557658 AURKAIP1Q9NWT8 199 aaPredicted RBP9.9□□□□□ -0.82
VIPAS39-211ENST00000557658 WDR83OSQ9Y284 106 aa9.9□□□□□ -0.82
VIPAS39-211ENST00000557658 POLR3KQ9Y2Y1 108 aaPredicted RBP9.9□□□□□ -0.82
VIPAS39-211ENST00000557658 OOEPA6NGQ2 149 aa9.89□□□□□ -0.83
VIPAS39-211ENST00000557658 C1QTNF9P0C862 333 aa9.89□□□□□ -0.83
VIPAS39-211ENST00000557658 BRWD1-AS2P59051 145 aa9.89□□□□□ -0.83
VIPAS39-211ENST00000557658 SPINK9Q5DT21 86 aa9.89□□□□□ -0.83
VIPAS39-211ENST00000557658 C6orf15Q6UXA7 325 aaPredicted RBP9.89□□□□□ -0.83
VIPAS39-211ENST00000557658 TMEM256Q8N2U0 113 aa9.89□□□□□ -0.83
VIPAS39-211ENST00000557658 SGMS2Q8NHU3 365 aa9.89□□□□□ -0.83
VIPAS39-211ENST00000557658 BCL2L2Q92843 193 aaPredicted RBP9.89□□□□□ -0.83
VIPAS39-211ENST00000557658 SFRP2Q96HF1 295 aa9.89□□□□□ -0.83
VIPAS39-211ENST00000557658 TXNDC17Q9BRA2 123 aa9.89□□□□□ -0.83
VIPAS39-211ENST00000557658 ATG101Q9BSB4 218 aa9.89□□□□□ -0.83
VIPAS39-211ENST00000557658 ELOVL5Q9NYP7 299 aa9.89□□□□□ -0.83
VIPAS39-211ENST00000557658 SIT1Q9Y3P8 196 aa9.89□□□□□ -0.83
VIPAS39-211ENST00000557658 TRAV38-1A0A0B4J264 116 aa9.89□□□□□ -0.83
VIPAS39-211ENST00000557658 J3QW42 95 aa9.89□□□□□ -0.83
VIPAS39-211ENST00000557658 HBZP02008 142 aa9.89□□□□□ -0.83
VIPAS39-211ENST00000557658 CD82P27701 267 aa9.89□□□□□ -0.83
VIPAS39-211ENST00000557658 CD1BP29016 333 aa9.89□□□□□ -0.83
VIPAS39-211ENST00000557658 GCH1P30793 250 aa9.89□□□□□ -0.83
VIPAS39-211ENST00000557658 SOX8P57073 446 aa9.89□□□□□ -0.83
VIPAS39-211ENST00000557658 BTNL3Q6UXE8 466 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms