RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 FLI1Q01543 452 aaPredicted RBP4.52□□□□□ -1.69
VPS33B-207ENST00000557470 NHLH2Q02577 135 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 ZNF616Q08AN1 781 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 ZNF816Q0VGE8 651 aaPredicted RBP4.52□□□□□ -1.69
VPS33B-207ENST00000557470 KIAA0141Q14154 515 aaPredicted RBP4.52□□□□□ -1.69
VPS33B-207ENST00000557470 GK3PQ14409 553 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 LTC4SQ16873 150 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 SPANXN2Q5MJ10 180 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 MOB3BQ86TA1 216 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 SATL1Q86VE3 508 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 DHFR2Q86XF0 187 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 STHQ8IWL8 128 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 RDH10Q8IZV5 341 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 PRSS35Q8N3Z0 413 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 YIPF7Q8N8F6 280 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 CHST4Q8NCG5 386 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 OR5D18Q8NGL1 313 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 OR1N2Q8NGR9 330 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 OR10X1Q8NGY0 326 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 RFESDQ8TAC1 157 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 LRRC20Q8TCA0 184 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 PP6455Q8WZ26 134 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 DCUN1D4Q92564 292 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 RFKQ969G6 155 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 RNF183Q96D59 192 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 ADAT3Q96EY9 351 aaPredicted RBP4.52□□□□□ -1.69
VPS33B-207ENST00000557470 TMEM80Q96HE8 168 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 KCTD7Q96MP8 289 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 SPACA5Q96QH8 159 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 TBX5Q99593 518 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 KLK15Q9H2R5 256 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 LINC00574Q9H8X3 128 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 PLSCR3Q9NRY6 295 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 CLN6Q9NWW5 311 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 IDI2-AS1Q9NZ38 188 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 ENOPH1Q9UHY7 261 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 KIF25Q9UIL4 384 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 PRELID3BQ9Y3B1 194 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 AP4S1Q9Y587 144 aa4.52□□□□□ -1.69
VPS33B-207ENST00000557470 MEIKINA0A087WXM9 373 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 TRAV39A0A0B4J263 110 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 A0A1W2PQL4 384 aaPredicted RBP4.51□□□□□ -1.69
VPS33B-207ENST00000557470 ZNF736B4DX44 427 aaPredicted RBP4.51□□□□□ -1.69
VPS33B-207ENST00000557470 OVOL1O14753 267 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 DEGS1O15121 323 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 DENRO43583 198 aaKnown RBP4.51□□□□□ -1.69
VPS33B-207ENST00000557470 MPZL2O60487 215 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 GAPDHP04406 335 aaKnown RBP4.51□□□□□ -1.69
VPS33B-207ENST00000557470 IGF1P05019 195 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 IL6RP08887 468 aaPredicted RBP4.51□□□□□ -1.69
VPS33B-207ENST00000557470 OR2T7P0C7T2 308 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 IGHV4-30-4P0DP06 118 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 DBTP11182 482 aaKnown RBP4.51□□□□□ -1.69
VPS33B-207ENST00000557470 ATF1P18846 271 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 RAB3AP20336 220 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 HTR1FP30939 366 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 SSTR5P35346 364 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 KIR3DL2P43630 455 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 RUNX1Q01196 453 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 IFITM2Q01629 132 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 OXA1LQ15070 435 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 CDK5R1Q15078 307 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 SRSF7Q16629 238 aaKnown RBP eCLIP4.51□□□□□ -1.69
VPS33B-207ENST00000557470 ANXA2RQ3ZCQ2 193 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 DNAL1Q4LDG9 190 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 BTNL8Q6UX41 500 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 FAM71E2Q8N5Q1 922 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 ZNF491Q8N8L2 437 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 TMEM104Q8NE00 496 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 CCDC54Q8NEL0 328 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 OR51T1Q8NGJ9 327 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 OR2T10Q8NGZ9 312 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 MRGPRDQ8TDS7 321 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 TSEN15Q8WW01 171 aaKnown RBP4.51□□□□□ -1.69
VPS33B-207ENST00000557470 S100ZQ8WXG8 99 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 GGHQ92820 318 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 DLX4Q92988 240 aaPredicted RBP4.51□□□□□ -1.69
VPS33B-207ENST00000557470 C10orf35Q96D05 121 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 UBE2E2Q96LR5 201 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 S1PR3Q99500 378 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 RASL11BQ9BPW5 248 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 THTPAQ9BU02 230 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 ALX4Q9H161 411 aaPredicted RBP4.51□□□□□ -1.69
VPS33B-207ENST00000557470 ZNF556Q9HAH1 456 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 SPACA1Q9HBV2 294 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 VSIG4Q9Y279 399 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 PCLOQ9Y6V0 5065 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 HERC2O95714 4834 aa4.51□□□□□ -1.69
VPS33B-207ENST00000557470 TRAV24A0A0B4J272 114 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 METTL15A6NJ78 407 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 G3V318 75 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 H0YJX3 145 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 GNGT2O14610 69 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 GYG2O15488 501 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 RBBP9O75884 186 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 DHFRP00374 187 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 MOSP00540 346 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 CRYGCP07315 174 aa4.5□□□□□ -1.69
VPS33B-207ENST00000557470 UBCP0CG48 685 aaKnown RBP4.5□□□□□ -1.69
VPS33B-207ENST00000557470 SLC2A2P11168 524 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms