RNA–Protein interactions for RNA: ENST00000557267.1

KTN1-225, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-225ENST00000557267 RHBDD3Q9Y3P4 386 aa0.63□□□□□ -2.31
KTN1-225ENST00000557267 SOX21Q9Y651 276 aaPredicted RBP0.63□□□□□ -2.31
KTN1-225ENST00000557267 MON2Q7Z3U7 1717 aa0.63□□□□□ -2.31
KTN1-225ENST00000557267 DYNC2H1Q8NCM8 4307 aaKnown RBP0.63□□□□□ -2.31
KTN1-225ENST00000557267 RGPD8O14715 1765 aaPredicted RBP0.62□□□□□ -2.31
KTN1-225ENST00000557267 RGPD5Q99666 1765 aa0.62□□□□□ -2.31
KTN1-225ENST00000557267 NCOA2Q15596 1464 aa0.62□□□□□ -2.31
KTN1-225ENST00000557267 AFDNP55196 1824 aaKnown RBP0.62□□□□□ -2.31
KTN1-225ENST00000557267 SBF2Q86WG5 1849 aa0.62□□□□□ -2.31
KTN1-225ENST00000557267 RNASEK-C17orf49H0YIS7 233 aa0.62□□□□□ -2.31
KTN1-225ENST00000557267 DENRO43583 198 aaKnown RBP0.62□□□□□ -2.31
KTN1-225ENST00000557267 PEBP1P30086 187 aaKnown RBP0.62□□□□□ -2.31
KTN1-225ENST00000557267 ARR3P36575 388 aa0.62□□□□□ -2.31
KTN1-225ENST00000557267 HINT1P49773 126 aaPredicted RBP0.62□□□□□ -2.31
KTN1-225ENST00000557267 TIMM23BQ5SRD1 257 aa0.62□□□□□ -2.31
KTN1-225ENST00000557267 SMIM5Q71RC9 77 aa0.62□□□□□ -2.31
KTN1-225ENST00000557267 DRAXINQ8NBI3 349 aaPredicted RBP0.62□□□□□ -2.31
KTN1-225ENST00000557267 CLHC1Q8NHS4 586 aa0.62□□□□□ -2.31
KTN1-225ENST00000557267 VAT1Q99536 393 aa0.62□□□□□ -2.31
KTN1-225ENST00000557267 APOL4Q9BPW4 351 aa0.62□□□□□ -2.31
KTN1-225ENST00000557267 TAPBPLQ9BX59 468 aa0.62□□□□□ -2.31
KTN1-225ENST00000557267 CYSTM1Q9H1C7 97 aa0.62□□□□□ -2.31
KTN1-225ENST00000557267 PSMD13Q9UNM6 376 aa0.62□□□□□ -2.31
KTN1-225ENST00000557267 DCCP43146 1447 aa0.62□□□□□ -2.31
KTN1-225ENST00000557267 SACSQ9NZJ4 4579 aa0.62□□□□□ -2.31
KTN1-225ENST00000557267 FYCO1Q9BQS8 1478 aa0.61□□□□□ -2.31
KTN1-225ENST00000557267 NSD2O96028 1365 aa0.61□□□□□ -2.31
KTN1-225ENST00000557267 PKDREJQ9NTG1 2253 aa0.61□□□□□ -2.31
KTN1-225ENST00000557267 KDM3BQ7LBC6 1761 aa0.61□□□□□ -2.31
KTN1-225ENST00000557267 ABCC6O95255 1503 aa0.61□□□□□ -2.31
KTN1-225ENST00000557267 TOP2AP11388 1531 aaKnown RBP0.61□□□□□ -2.31
KTN1-225ENST00000557267 J3QQQ9 107 aa0.61□□□□□ -2.31
KTN1-225ENST00000557267 PIN1P1O15428 100 aa0.61□□□□□ -2.31
KTN1-225ENST00000557267 SPOPO43791 374 aa0.61□□□□□ -2.31
KTN1-225ENST00000557267 CA2P00918 260 aa0.61□□□□□ -2.31
KTN1-225ENST00000557267 FGF4P08620 206 aa0.61□□□□□ -2.31
KTN1-225ENST00000557267 SLC2A1P11166 492 aa0.61□□□□□ -2.31
KTN1-225ENST00000557267 PRKACAP17612 351 aa0.61□□□□□ -2.31
KTN1-225ENST00000557267 GCLMP48507 274 aa0.61□□□□□ -2.31
KTN1-225ENST00000557267 RPL26P61254 145 aaKnown RBP0.61□□□□□ -2.31
KTN1-225ENST00000557267 ZIC4Q8N9L1 334 aa0.61□□□□□ -2.31
KTN1-225ENST00000557267 GATD1Q8NB37 220 aa0.61□□□□□ -2.31
KTN1-225ENST00000557267 FBXO36Q8NEA4 188 aa0.61□□□□□ -2.31
KTN1-225ENST00000557267 OR5T3Q8NGG3 340 aa0.61□□□□□ -2.31
KTN1-225ENST00000557267 CLDN23Q96B33 292 aa0.61□□□□□ -2.31
KTN1-225ENST00000557267 TMIGD2Q96BF3 282 aa0.61□□□□□ -2.31
KTN1-225ENST00000557267 BEX2Q9BXY8 128 aa0.61□□□□□ -2.31
KTN1-225ENST00000557267 SMDT1Q9H4I9 107 aa0.61□□□□□ -2.31
KTN1-225ENST00000557267 ACOT13Q9NPJ3 140 aa0.61□□□□□ -2.31
KTN1-225ENST00000557267 CHRAC1Q9NRG0 131 aa0.61□□□□□ -2.31
KTN1-225ENST00000557267 BABAM2Q9NXR7 383 aa0.61□□□□□ -2.31
KTN1-225ENST00000557267 RPL26L1Q9UNX3 145 aaKnown RBP0.61□□□□□ -2.31
KTN1-225ENST00000557267 MRPS16Q9Y3D3 137 aaKnown RBP0.61□□□□□ -2.31
KTN1-225ENST00000557267 LMO7Q8WWI1 1683 aa0.61□□□□□ -2.31
KTN1-225ENST00000557267 TECPR2O15040 1411 aa0.61□□□□□ -2.31
KTN1-225ENST00000557267 NSD3Q9BZ95 1437 aa0.61□□□□□ -2.31
KTN1-225ENST00000557267 ADGRL3Q9HAR2 1447 aa0.61□□□□□ -2.31
KTN1-225ENST00000557267 RRBP1Q9P2E9 1410 aaKnown RBP0.61□□□□□ -2.31
KTN1-225ENST00000557267 ABCA9Q8IUA7 1624 aa0.6□□□□□ -2.31
KTN1-225ENST00000557267 PKHD1P08F94 4074 aa0.6□□□□□ -2.31
KTN1-225ENST00000557267 ACACAQ13085 2346 aa0.6□□□□□ -2.31
KTN1-225ENST00000557267 QRICH2Q9H0J4 1663 aa0.6□□□□□ -2.31
KTN1-225ENST00000557267 SOD1P00441 154 aa0.6□□□□□ -2.31
KTN1-225ENST00000557267 GTF2H1P32780 548 aa0.6□□□□□ -2.31
KTN1-225ENST00000557267 TTPAP49638 278 aa0.6□□□□□ -2.31
KTN1-225ENST00000557267 LRRC26Q2I0M4 334 aa0.6□□□□□ -2.31
KTN1-225ENST00000557267 BBOF1Q8ND07 529 aa0.6□□□□□ -2.31
KTN1-225ENST00000557267 C16orf78Q8WTQ4 265 aa0.6□□□□□ -2.31
KTN1-225ENST00000557267 NELFBQ8WX92 580 aa0.6□□□□□ -2.31
KTN1-225ENST00000557267 BIRC8Q96P09 236 aa0.6□□□□□ -2.31
KTN1-225ENST00000557267 TIMM21Q9BVV7 248 aa0.6□□□□□ -2.31
KTN1-225ENST00000557267 DOT1LQ8TEK3 1739 aa0.6□□□□□ -2.31
KTN1-225ENST00000557267 PARP4Q9UKK3 1724 aaKnown RBP0.6□□□□□ -2.31
KTN1-225ENST00000557267 TOGARAM1Q9Y4F4 1720 aa0.6□□□□□ -2.31
KTN1-225ENST00000557267 CCDC88AQ3V6T2 1871 aa0.6□□□□□ -2.31
KTN1-225ENST00000557267 PLXNA1Q9UIW2 1896 aa0.6□□□□□ -2.31
KTN1-225ENST00000557267 MRC1P22897 1456 aa0.6□□□□□ -2.31
KTN1-225ENST00000557267 URB1O60287 2271 aaKnown RBP0.59□□□□□ -2.31
KTN1-225ENST00000557267 MAP2P11137 1827 aaKnown RBP0.59□□□□□ -2.31
KTN1-225ENST00000557267 KIF13BQ9NQT8 1826 aa0.59□□□□□ -2.31
KTN1-225ENST00000557267 CFAP74Q9C0B2 1584 aa0.59□□□□□ -2.31
KTN1-225ENST00000557267 TROQ12816 1431 aaPredicted RBP0.59□□□□□ -2.31
KTN1-225ENST00000557267 TVP23AA6NH52 213 aa0.59□□□□□ -2.31
KTN1-225ENST00000557267 ZNF3P17036 446 aa0.59□□□□□ -2.31
KTN1-225ENST00000557267 PYCR1P32322 319 aa0.59□□□□□ -2.31
KTN1-225ENST00000557267 CBX5P45973 191 aa0.59□□□□□ -2.31
KTN1-225ENST00000557267 DAOAP59103 153 aa0.59□□□□□ -2.31
KTN1-225ENST00000557267 DMTNQ08495 405 aa0.59□□□□□ -2.31
KTN1-225ENST00000557267 SKP2Q13309 424 aa0.59□□□□□ -2.31
KTN1-225ENST00000557267 PEX13Q92968 403 aa0.59□□□□□ -2.31
KTN1-225ENST00000557267 PECRQ9BY49 303 aa0.59□□□□□ -2.31
KTN1-225ENST00000557267 POTEKPQ9BYX7 375 aa0.59□□□□□ -2.31
KTN1-225ENST00000557267 BLZF1Q9H2G9 400 aa0.59□□□□□ -2.31
KTN1-225ENST00000557267 IFNKQ9P0W0 207 aa0.59□□□□□ -2.31
KTN1-225ENST00000557267 PRO2289Q9P1D8 64 aa0.59□□□□□ -2.31
KTN1-225ENST00000557267 PUS1Q9Y606 427 aaKnown RBP eCLIP0.59□□□□□ -2.31
KTN1-225ENST00000557267 KPTNQ9Y664 436 aa0.59□□□□□ -2.31
KTN1-225ENST00000557267 FRAS1Q86XX4 4008 aa0.59□□□□□ -2.32
KTN1-225ENST00000557267 TRPM1Q7Z4N2 1603 aa0.59□□□□□ -2.32
KTN1-225ENST00000557267 NUMA1Q14980 2115 aa0.59□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms