RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 IGKV1D-12P01611 117 aa4.1□□□□□ -1.75
ATXN3-245ENST00000556958 C8orf88P0DMB2 117 aa4.1□□□□□ -1.75
ATXN3-245ENST00000556958 ATF1P18846 271 aa4.1□□□□□ -1.75
ATXN3-245ENST00000556958 EDN2P20800 178 aa4.1□□□□□ -1.75
ATXN3-245ENST00000556958 CCL1P22362 96 aa4.1□□□□□ -1.75
ATXN3-245ENST00000556958 GALP22466 123 aa4.1□□□□□ -1.75
ATXN3-245ENST00000556958 PRDX6P30041 224 aa4.1□□□□□ -1.75
ATXN3-245ENST00000556958 DEFA5Q01523 94 aa4.1□□□□□ -1.75
ATXN3-245ENST00000556958 NHLH2Q02577 135 aa4.1□□□□□ -1.75
ATXN3-245ENST00000556958 PSG5Q15238 335 aa4.1□□□□□ -1.75
ATXN3-245ENST00000556958 TMEM179BQ7Z7N9 219 aa4.1□□□□□ -1.75
ATXN3-245ENST00000556958 STX19Q8N4C7 294 aa4.1□□□□□ -1.75
ATXN3-245ENST00000556958 NECAP1Q8NC96 275 aa4.1□□□□□ -1.75
ATXN3-245ENST00000556958 OR10V1Q8NGI7 309 aa4.1□□□□□ -1.75
ATXN3-245ENST00000556958 CNN2Q99439 309 aaKnown RBP4.1□□□□□ -1.75
ATXN3-245ENST00000556958 YTHDF1Q9BYJ9 559 aaKnown RBP4.1□□□□□ -1.75
ATXN3-245ENST00000556958 MED20Q9H944 212 aa4.1□□□□□ -1.75
ATXN3-245ENST00000556958 AKIP1Q9NQ31 210 aa4.1□□□□□ -1.75
ATXN3-245ENST00000556958 OR2S2Q9NQN1 319 aa4.1□□□□□ -1.75
ATXN3-245ENST00000556958 ZNF230Q9UIE0 474 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-245ENST00000556958 SLC45A2Q9UMX9 530 aa4.1□□□□□ -1.75
ATXN3-245ENST00000556958 UFC1Q9Y3C8 167 aa4.1□□□□□ -1.75
ATXN3-245ENST00000556958 R4GMQ9 66 aa4.1□□□□□ -1.75
ATXN3-245ENST00000556958 FAM90A23PA8MXZ1 464 aa4.09□□□□□ -1.75
ATXN3-245ENST00000556958 FXYD1O00168 92 aa4.09□□□□□ -1.75
ATXN3-245ENST00000556958 GYG2O15488 501 aa4.09□□□□□ -1.75
ATXN3-245ENST00000556958 DIRAS1O95057 198 aa4.09□□□□□ -1.75
ATXN3-245ENST00000556958 HLA-AP01891 365 aaKnown RBP4.09□□□□□ -1.75
ATXN3-245ENST00000556958 OR9G9P0C7N8 305 aa4.09□□□□□ -1.75
ATXN3-245ENST00000556958 TMEM225BP0DP42 221 aa4.09□□□□□ -1.75
ATXN3-245ENST00000556958 FUT3P21217 361 aa4.09□□□□□ -1.75
ATXN3-245ENST00000556958 RRM2P31350 389 aa4.09□□□□□ -1.75
ATXN3-245ENST00000556958 HCCSP53701 268 aa4.09□□□□□ -1.75
ATXN3-245ENST00000556958 ELLP55199 621 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-245ENST00000556958 RPS7P62081 194 aaKnown RBP4.09□□□□□ -1.75
ATXN3-245ENST00000556958 IL13RA2Q14627 380 aa4.09□□□□□ -1.75
ATXN3-245ENST00000556958 MORN2Q502X0 79 aa4.09□□□□□ -1.75
ATXN3-245ENST00000556958 SLC35D3Q5M8T2 416 aa4.09□□□□□ -1.75
ATXN3-245ENST00000556958 C6orf183Q5T699 404 aa4.09□□□□□ -1.75
ATXN3-245ENST00000556958 FAM71F2Q6NXP2 309 aa4.09□□□□□ -1.75
ATXN3-245ENST00000556958 C8orf82Q6P1X6 216 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-245ENST00000556958 HACD2Q6Y1H2 254 aa4.09□□□□□ -1.75
ATXN3-245ENST00000556958 ZNF833PQ6ZTB9 187 aa4.09□□□□□ -1.75
ATXN3-245ENST00000556958 UTS2BQ765I0 119 aa4.09□□□□□ -1.75
ATXN3-245ENST00000556958 APRG1Q8IVJ8 170 aa4.09□□□□□ -1.75
ATXN3-245ENST00000556958 OR8D4Q8NGM9 314 aa4.09□□□□□ -1.75
ATXN3-245ENST00000556958 CCDC107Q8WV48 283 aa4.09□□□□□ -1.75
ATXN3-245ENST00000556958 MCUR1Q96AQ8 359 aa4.09□□□□□ -1.75
ATXN3-245ENST00000556958 C7orf34Q96L11 122 aa4.09□□□□□ -1.75
ATXN3-245ENST00000556958 NSMCE2Q96MF7 247 aa4.09□□□□□ -1.75
ATXN3-245ENST00000556958 PHB2Q99623 299 aa4.09□□□□□ -1.75
ATXN3-245ENST00000556958 THTPAQ9BU02 230 aa4.09□□□□□ -1.75
ATXN3-245ENST00000556958 ABHD14AQ9BUJ0 271 aa4.09□□□□□ -1.75
ATXN3-245ENST00000556958 DPCDQ9BVM2 203 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-245ENST00000556958 TAS2R1Q9NYW7 299 aa4.09□□□□□ -1.75
ATXN3-245ENST00000556958 TRAPPC2LQ9UL33 140 aa4.09□□□□□ -1.75
ATXN3-245ENST00000556958 WASHC3Q9Y3C0 194 aa4.09□□□□□ -1.75
ATXN3-245ENST00000556958 TRBV9A0A0B4J1U6 114 aa4.08□□□□□ -1.76
ATXN3-245ENST00000556958 IGKV1-9A0A0C4DH69 117 aa4.08□□□□□ -1.76
ATXN3-245ENST00000556958 A0A1B0GW64 132 aa4.08□□□□□ -1.76
ATXN3-245ENST00000556958 PPP5D1E7EU14 171 aa4.08□□□□□ -1.76
ATXN3-245ENST00000556958 AIPO00170 330 aa4.08□□□□□ -1.76
ATXN3-245ENST00000556958 GNGT2O14610 69 aa4.08□□□□□ -1.76
ATXN3-245ENST00000556958 MPPED1O15442 326 aa4.08□□□□□ -1.76
ATXN3-245ENST00000556958 HBZP02008 142 aa4.08□□□□□ -1.76
ATXN3-245ENST00000556958 MT-ND4P03905 459 aa4.08□□□□□ -1.76
ATXN3-245ENST00000556958 CALB2P22676 271 aa4.08□□□□□ -1.76
ATXN3-245ENST00000556958 ARL3P36405 182 aa4.08□□□□□ -1.76
ATXN3-245ENST00000556958 MAGEA2P43356 314 aa4.08□□□□□ -1.76
ATXN3-245ENST00000556958 ODF4Q2M2E3 257 aa4.08□□□□□ -1.76
ATXN3-245ENST00000556958 C15orf32Q32M92 178 aa4.08□□□□□ -1.76
ATXN3-245ENST00000556958 SLC22A6Q4U2R8 563 aa4.08□□□□□ -1.76
ATXN3-245ENST00000556958 TTC32Q5I0X7 151 aa4.08□□□□□ -1.76
ATXN3-245ENST00000556958 ELP2Q6IA86 826 aa4.08□□□□□ -1.76
ATXN3-245ENST00000556958 MORN3Q6PF18 240 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-245ENST00000556958 TRAT1Q6PIZ9 186 aa4.08□□□□□ -1.76
ATXN3-245ENST00000556958 DHFR2Q86XF0 187 aa4.08□□□□□ -1.76
ATXN3-245ENST00000556958 SUMF2Q8NBJ7 301 aa4.08□□□□□ -1.76
ATXN3-245ENST00000556958 BBS1Q8NFJ9 593 aa4.08□□□□□ -1.76
ATXN3-245ENST00000556958 OR52L2PQ8NGH6 319 aa4.08□□□□□ -1.76
ATXN3-245ENST00000556958 RFT1Q96AA3 541 aa4.08□□□□□ -1.76
ATXN3-245ENST00000556958 PYURFQ96I23 114 aa4.08□□□□□ -1.76
ATXN3-245ENST00000556958 OPALINQ96PE5 141 aa4.08□□□□□ -1.76
ATXN3-245ENST00000556958 ADGRL4Q9HBW9 690 aa4.08□□□□□ -1.76
ATXN3-245ENST00000556958 PIPOXQ9P0Z9 390 aa4.08□□□□□ -1.76
ATXN3-245ENST00000556958 SAMD4AQ9UPU9 718 aaKnown RBP4.08□□□□□ -1.76
ATXN3-245ENST00000556958 DMRT1Q9Y5R6 373 aa4.08□□□□□ -1.76
ATXN3-245ENST00000556958 ERICH4A6NGS2 130 aa4.07□□□□□ -1.76
ATXN3-245ENST00000556958 FAM90A7PA6NKC0 464 aa4.07□□□□□ -1.76
ATXN3-245ENST00000556958 ZNF705EA8MWA4 302 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-245ENST00000556958 H0YJW9 148 aa4.07□□□□□ -1.76
ATXN3-245ENST00000556958 RAB29O14966 203 aa4.07□□□□□ -1.76
ATXN3-245ENST00000556958 SRSF10O75494 262 aaKnown RBP4.07□□□□□ -1.76
ATXN3-245ENST00000556958 RBMXL2O75526 392 aaKnown RBP4.07□□□□□ -1.76
ATXN3-245ENST00000556958 KRT36O76013 467 aa4.07□□□□□ -1.76
ATXN3-245ENST00000556958 S1PR2O95136 353 aa4.07□□□□□ -1.76
ATXN3-245ENST00000556958 SOX14O95416 240 aa4.07□□□□□ -1.76
ATXN3-245ENST00000556958 MT-ND2P03891 347 aa4.07□□□□□ -1.76
ATXN3-245ENST00000556958 SPART-AS1P0CW21 52 aa4.07□□□□□ -1.76
ATXN3-245ENST00000556958 PTTG1IPP53801 180 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms