RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 CGB3P0DN86 165 aa15.15■□□□□ 0.02
SDR39U1-220ENST00000556548 CGB7P0DN87 165 aa15.15■□□□□ 0.02
SDR39U1-220ENST00000556548 SFTPCP11686 197 aa15.15■□□□□ 0.02
SDR39U1-220ENST00000556548 ARHGDIBP52566 201 aa15.15■□□□□ 0.02
SDR39U1-220ENST00000556548 LYPD2Q6UXB3 125 aa15.15■□□□□ 0.02
SDR39U1-220ENST00000556548 EDARADDQ8WWZ3 215 aa15.15■□□□□ 0.02
SDR39U1-220ENST00000556548 NARS2Q96I59 477 aaKnown RBP15.15■□□□□ 0.02
SDR39U1-220ENST00000556548 CLN8Q9UBY8 286 aa15.15■□□□□ 0.02
SDR39U1-220ENST00000556548 NKX6-3A6NJ46 265 aa15.14■□□□□ 0.01
SDR39U1-220ENST00000556548 LYNX1G3V0Z9 82 aa15.14■□□□□ 0.01
SDR39U1-220ENST00000556548 YPEL1O60688 119 aa15.14■□□□□ 0.01
SDR39U1-220ENST00000556548 MMP23AO75900 390 aa15.14■□□□□ 0.01
SDR39U1-220ENST00000556548 CST7O76096 145 aa15.14■□□□□ 0.01
SDR39U1-220ENST00000556548 LYNX1P0DP58 116 aa15.14■□□□□ 0.01
SDR39U1-220ENST00000556548 CATR1Q13166 79 aa15.14■□□□□ 0.01
SDR39U1-220ENST00000556548 CLINT1Q14677 625 aa15.14■□□□□ 0.01
SDR39U1-220ENST00000556548 C1orf87Q8N0U7 546 aa15.14■□□□□ 0.01
SDR39U1-220ENST00000556548 MUC15Q8N387 334 aa15.14■□□□□ 0.01
SDR39U1-220ENST00000556548 BPIFCQ8NFQ6 507 aa15.14■□□□□ 0.01
SDR39U1-220ENST00000556548 LSM10Q969L4 123 aaKnown RBP15.14■□□□□ 0.01
SDR39U1-220ENST00000556548 YPEL2Q96QA6 119 aa15.14■□□□□ 0.01
SDR39U1-220ENST00000556548 SLC25A10Q9UBX3 287 aaPredicted RBP15.14■□□□□ 0.01
SDR39U1-220ENST00000556548 USF3Q68DE3 2245 aa15.14■□□□□ 0.01
SDR39U1-220ENST00000556548 B9A039 149 aa15.14■□□□□ 0.01
SDR39U1-220ENST00000556548 FCN3O75636 299 aa15.14■□□□□ 0.01
SDR39U1-220ENST00000556548 ATG12O94817 140 aa15.14■□□□□ 0.01
SDR39U1-220ENST00000556548 S100A8P05109 93 aa15.14■□□□□ 0.01
SDR39U1-220ENST00000556548 TMEM217Q8N7C4 229 aa15.14■□□□□ 0.01
SDR39U1-220ENST00000556548 RBMXL1Q96E39 390 aaKnown RBP15.14■□□□□ 0.01
SDR39U1-220ENST00000556548 BARX1Q9HBU1 254 aaPredicted RBP15.14■□□□□ 0.01
SDR39U1-220ENST00000556548 TAS2R3Q9NYW6 316 aa15.14■□□□□ 0.01
SDR39U1-220ENST00000556548 JTBO76095 146 aa15.13■□□□□ 0.01
SDR39U1-220ENST00000556548 IAPPP10997 89 aa15.13■□□□□ 0.01
SDR39U1-220ENST00000556548 UQCRFS1P47985 274 aa15.13■□□□□ 0.01
SDR39U1-220ENST00000556548 NCR3LG1Q68D85 454 aa15.13■□□□□ 0.01
SDR39U1-220ENST00000556548 TMEM88Q6PEY1 159 aa15.13■□□□□ 0.01
SDR39U1-220ENST00000556548 RALYQ9UKM9 306 aaKnown RBP15.13■□□□□ 0.01
SDR39U1-220ENST00000556548 ABCA4P78363 2273 aa15.13■□□□□ 0.01
SDR39U1-220ENST00000556548 KIAA1324LA8MWY0 1029 aaPredicted RBP15.12■□□□□ 0.01
SDR39U1-220ENST00000556548 SPP1P10451 314 aa15.12■□□□□ 0.01
SDR39U1-220ENST00000556548 S100PP25815 95 aa15.12■□□□□ 0.01
SDR39U1-220ENST00000556548 GNG10P50151 68 aa15.12■□□□□ 0.01
SDR39U1-220ENST00000556548 PAX9P55771 341 aa15.12■□□□□ 0.01
SDR39U1-220ENST00000556548 PRAMEF5Q5TYX0 476 aa15.12■□□□□ 0.01
SDR39U1-220ENST00000556548 C1orf229Q6ZS94 237 aaPredicted RBP15.12■□□□□ 0.01
SDR39U1-220ENST00000556548 TMEM252Q8N6L7 170 aa15.12■□□□□ 0.01
SDR39U1-220ENST00000556548 OR51M1Q9H341 326 aa15.12■□□□□ 0.01
SDR39U1-220ENST00000556548 LYRM2Q9NU23 88 aaPredicted RBP15.12■□□□□ 0.01
SDR39U1-220ENST00000556548 IGHV1-69-2A0A0G2JMI3 117 aa15.12■□□□□ 0.01
SDR39U1-220ENST00000556548 M0R1X1 148 aa15.12■□□□□ 0.01
SDR39U1-220ENST00000556548 EFNB3Q15768 340 aa15.12■□□□□ 0.01
SDR39U1-220ENST00000556548 SLC16A13Q7RTY0 426 aa15.12■□□□□ 0.01
SDR39U1-220ENST00000556548 ODF3L1Q8IXM7 274 aa15.12■□□□□ 0.01
SDR39U1-220ENST00000556548 OR1S2Q8NGQ3 325 aa15.12■□□□□ 0.01
SDR39U1-220ENST00000556548 RNF141Q8WVD5 230 aa15.12■□□□□ 0.01
SDR39U1-220ENST00000556548 IFI27L2Q9H2X8 130 aa15.12■□□□□ 0.01
SDR39U1-220ENST00000556548 C19orf12Q9NSK7 152 aa15.12■□□□□ 0.01
SDR39U1-220ENST00000556548 GFOD1Q9NXC2 390 aa15.12■□□□□ 0.01
SDR39U1-220ENST00000556548 PLA2G2EQ9NZK7 142 aa15.12■□□□□ 0.01
SDR39U1-220ENST00000556548 ARFGEF3Q5TH69 2177 aa15.12■□□□□ 0.01
SDR39U1-220ENST00000556548 HRNRQ86YZ3 2850 aaPredicted RBP15.11■□□□□ 0.01
SDR39U1-220ENST00000556548 ZNF705EA8MWA4 302 aaPredicted RBP15.11■□□□□ 0.01
SDR39U1-220ENST00000556548 FAM157CP0CG43 387 aa15.11■□□□□ 0.01
SDR39U1-220ENST00000556548 EIF5AP63241 154 aaKnown RBP15.11■□□□□ 0.01
SDR39U1-220ENST00000556548 ZNF672Q499Z4 452 aaPredicted RBP15.11■□□□□ 0.01
SDR39U1-220ENST00000556548 CT45A1Q5HYN5 189 aa15.11■□□□□ 0.01
SDR39U1-220ENST00000556548 SVBPQ8N300 66 aa15.11■□□□□ 0.01
SDR39U1-220ENST00000556548 CT45A3Q8NHU0 189 aa15.11■□□□□ 0.01
SDR39U1-220ENST00000556548 H1FXQ92522 213 aaKnown RBP15.11■□□□□ 0.01
SDR39U1-220ENST00000556548 TSNAXQ99598 290 aaKnown RBP15.11■□□□□ 0.01
SDR39U1-220ENST00000556548 HSD17B10Q99714 261 aaKnown RBP15.11■□□□□ 0.01
SDR39U1-220ENST00000556548 NIT2Q9NQR4 276 aa15.11■□□□□ 0.01
SDR39U1-220ENST00000556548 FCGR3BO75015 233 aa15.11■□□□□ 0.01
SDR39U1-220ENST00000556548 GAPDHP04406 335 aaKnown RBP15.11■□□□□ 0.01
SDR39U1-220ENST00000556548 SLC25A6P12236 298 aa15.11■□□□□ 0.01
SDR39U1-220ENST00000556548 DUTP33316 252 aaKnown RBP15.11■□□□□ 0.01
SDR39U1-220ENST00000556548 TFF3Q07654 80 aa15.11■□□□□ 0.01
SDR39U1-220ENST00000556548 ZNF66Q6ZN08 573 aa15.11■□□□□ 0.01
SDR39U1-220ENST00000556548 ZNF295-AS1Q8N0V1 137 aa15.11■□□□□ 0.01
SDR39U1-220ENST00000556548 HSD17B11Q8NBQ5 300 aa15.11■□□□□ 0.01
SDR39U1-220ENST00000556548 ABHD14AQ9BUJ0 271 aa15.11■□□□□ 0.01
SDR39U1-220ENST00000556548 ZNRD1Q9P1U0 126 aa15.11■□□□□ 0.01
SDR39U1-220ENST00000556548 PIGBOS1A0A0B4J2F0 54 aa15.1■□□□□ 0.01
SDR39U1-220ENST00000556548 RAB19A4D1S5 217 aa15.1■□□□□ 0.01
SDR39U1-220ENST00000556548 FGF16O43320 207 aa15.1■□□□□ 0.01
SDR39U1-220ENST00000556548 RPL31P62899 125 aaKnown RBP15.1■□□□□ 0.01
SDR39U1-220ENST00000556548 TMEM267Q0VDI3 215 aaPredicted RBP15.1■□□□□ 0.01
SDR39U1-220ENST00000556548 SH3BGRL3Q9H299 93 aa15.1■□□□□ 0.01
SDR39U1-220ENST00000556548 IDI2-AS1Q9NZ38 188 aa15.1■□□□□ 0.01
SDR39U1-220ENST00000556548 MMP24Q9Y5R2 645 aa15.1■□□□□ 0.01
SDR39U1-220ENST00000556548 CCL3L1P16619 93 aa15.1■□□□□ 0.01
SDR39U1-220ENST00000556548 DYNLT3P51808 116 aa15.1■□□□□ 0.01
SDR39U1-220ENST00000556548 AVPI1Q5T686 147 aa15.1■□□□□ 0.01
SDR39U1-220ENST00000556548 UBAC2Q8NBM4 344 aa15.1■□□□□ 0.01
SDR39U1-220ENST00000556548 OR5C1Q8NGR4 320 aa15.1■□□□□ 0.01
SDR39U1-220ENST00000556548 C2CD4CQ8TF44 421 aa15.1■□□□□ 0.01
SDR39U1-220ENST00000556548 NCOR1P1Q9H4R4 102 aa15.1■□□□□ 0.01
SDR39U1-220ENST00000556548 RFNGQ9Y644 331 aa15.1■□□□□ 0.01
SDR39U1-220ENST00000556548 YLPM1P49750 1951 aaKnown RBP15.1■□□□□ 0.01
SDR39U1-220ENST00000556548 BORCS7-ASMTA0A0B4J1R7 106 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms