RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 GABRA6Q16445 453 aa12.82□□□□□ -0.36
ARHGEF40-207ENST00000556399 MIC13Q5XKP0 118 aa12.82□□□□□ -0.36
ARHGEF40-207ENST00000556399 FOXD3Q9UJU5 478 aaPredicted RBP12.82□□□□□ -0.36
ARHGEF40-207ENST00000556399 C5orf63A6NC05 138 aa12.82□□□□□ -0.36
ARHGEF40-207ENST00000556399 RAB29O14966 203 aa12.82□□□□□ -0.36
ARHGEF40-207ENST00000556399 TOX4O94842 621 aa12.82□□□□□ -0.36
ARHGEF40-207ENST00000556399 SP1P08047 785 aa12.82□□□□□ -0.36
ARHGEF40-207ENST00000556399 PLXNB3Q9ULL4 1909 aa12.82□□□□□ -0.36
ARHGEF40-207ENST00000556399 COL4A6Q14031 1691 aa12.82□□□□□ -0.36
ARHGEF40-207ENST00000556399 ABCA7Q8IZY2 2146 aa12.82□□□□□ -0.36
ARHGEF40-207ENST00000556399 CLDN14O95500 239 aa12.82□□□□□ -0.36
ARHGEF40-207ENST00000556399 TAS2R60P59551 318 aa12.82□□□□□ -0.36
ARHGEF40-207ENST00000556399 ZNF826PQ6ZT77 177 aa12.82□□□□□ -0.36
ARHGEF40-207ENST00000556399 ZNF525Q8N782 197 aa12.82□□□□□ -0.36
ARHGEF40-207ENST00000556399 GLRX2Q9NS18 164 aa12.82□□□□□ -0.36
ARHGEF40-207ENST00000556399 GOLT1BQ9Y3E0 138 aa12.82□□□□□ -0.36
ARHGEF40-207ENST00000556399 PROB1E7EW31 1015 aa12.81□□□□□ -0.36
ARHGEF40-207ENST00000556399 COX5BP10606 129 aa12.81□□□□□ -0.36
ARHGEF40-207ENST00000556399 DNASE2BQ8WZ79 361 aa12.81□□□□□ -0.36
ARHGEF40-207ENST00000556399 MPDZO75970 2070 aa12.81□□□□□ -0.36
ARHGEF40-207ENST00000556399 GRIFINA4D1Z8 144 aa12.81□□□□□ -0.36
ARHGEF40-207ENST00000556399 SPCS3P61009 180 aa12.81□□□□□ -0.36
ARHGEF40-207ENST00000556399 C21orf62-AS1Q17RA5 79 aa12.81□□□□□ -0.36
ARHGEF40-207ENST00000556399 SMIM15Q7Z3B0 74 aa12.81□□□□□ -0.36
ARHGEF40-207ENST00000556399 OR5P3Q8WZ94 311 aa12.81□□□□□ -0.36
ARHGEF40-207ENST00000556399 MRPL18Q9H0U6 180 aaKnown RBP12.81□□□□□ -0.36
ARHGEF40-207ENST00000556399 IL19Q9UHD0 177 aa12.81□□□□□ -0.36
ARHGEF40-207ENST00000556399 RFPL3SP0C7P2 107 aa12.81□□□□□ -0.36
ARHGEF40-207ENST00000556399 VMA21Q3ZAQ7 101 aa12.81□□□□□ -0.36
ARHGEF40-207ENST00000556399 C1QL4Q86Z23 238 aa12.81□□□□□ -0.36
ARHGEF40-207ENST00000556399 OR4X1Q8NH49 305 aa12.81□□□□□ -0.36
ARHGEF40-207ENST00000556399 ZNF596Q8TC21 504 aa12.81□□□□□ -0.36
ARHGEF40-207ENST00000556399 TIMM9Q9Y5J7 89 aa12.81□□□□□ -0.36
ARHGEF40-207ENST00000556399 IGLV3-12A0A075B6K2 115 aa12.81□□□□□ -0.36
ARHGEF40-207ENST00000556399 APCSP02743 223 aa12.81□□□□□ -0.36
ARHGEF40-207ENST00000556399 HELZP42694 1942 aaKnown RBP12.81□□□□□ -0.36
ARHGEF40-207ENST00000556399 CSN1S1P47710 185 aa12.81□□□□□ -0.36
ARHGEF40-207ENST00000556399 ID3Q02535 119 aa12.81□□□□□ -0.36
ARHGEF40-207ENST00000556399 COL5A1-AS1Q5SY13 56 aa12.81□□□□□ -0.36
ARHGEF40-207ENST00000556399 DHRS13Q6UX07 377 aa12.81□□□□□ -0.36
ARHGEF40-207ENST00000556399 OR8I2Q8N0Y5 310 aa12.81□□□□□ -0.36
ARHGEF40-207ENST00000556399 OR1L4Q8NGR5 311 aa12.81□□□□□ -0.36
ARHGEF40-207ENST00000556399 ASXL3Q9C0F0 2248 aa12.81□□□□□ -0.36
ARHGEF40-207ENST00000556399 IGLV3-32A0A0A0MS00 114 aa12.8□□□□□ -0.36
ARHGEF40-207ENST00000556399 ARL14EPLP0DKL9 152 aa12.8□□□□□ -0.36
ARHGEF40-207ENST00000556399 HES1Q14469 280 aa12.8□□□□□ -0.36
ARHGEF40-207ENST00000556399 GFI1BQ5VTD9 330 aa12.8□□□□□ -0.36
ARHGEF40-207ENST00000556399 TMEM251Q8N6I4 163 aa12.8□□□□□ -0.36
ARHGEF40-207ENST00000556399 MISP3Q96FF7 219 aa12.8□□□□□ -0.36
ARHGEF40-207ENST00000556399 RFNGQ9Y644 331 aa12.8□□□□□ -0.36
ARHGEF40-207ENST00000556399 FRMPD3Q5JV73 1810 aa12.8□□□□□ -0.36
ARHGEF40-207ENST00000556399 MARCH11A6NNE9 402 aa12.8□□□□□ -0.36
ARHGEF40-207ENST00000556399 KLF3P57682 345 aaPredicted RBP12.8□□□□□ -0.36
ARHGEF40-207ENST00000556399 WFDC8Q8IUA0 241 aa12.8□□□□□ -0.36
ARHGEF40-207ENST00000556399 GMPPAQ96IJ6 420 aaPredicted RBP12.8□□□□□ -0.36
ARHGEF40-207ENST00000556399 CLDN16Q9Y5I7 305 aa12.8□□□□□ -0.36
ARHGEF40-207ENST00000556399 IGKV1-12A0A0C4DH73 117 aa12.8□□□□□ -0.36
ARHGEF40-207ENST00000556399 VENTXO95231 258 aa12.8□□□□□ -0.36
ARHGEF40-207ENST00000556399 MT-CO3P00414 261 aa12.8□□□□□ -0.36
ARHGEF40-207ENST00000556399 IGKV1D-12P01611 117 aa12.8□□□□□ -0.36
ARHGEF40-207ENST00000556399 S100A7P31151 101 aa12.8□□□□□ -0.36
ARHGEF40-207ENST00000556399 DCAF10Q5QP82 559 aa12.8□□□□□ -0.36
ARHGEF40-207ENST00000556399 TIPARPQ7Z3E1 657 aaKnown RBP12.8□□□□□ -0.36
ARHGEF40-207ENST00000556399 SAP25Q8TEE9 199 aa12.8□□□□□ -0.36
ARHGEF40-207ENST00000556399 C1QTNF5Q9BXJ0 243 aa12.8□□□□□ -0.36
ARHGEF40-207ENST00000556399 PNRC2Q9NPJ4 139 aaKnown RBP12.8□□□□□ -0.36
ARHGEF40-207ENST00000556399 ORM2P19652 201 aa12.8□□□□□ -0.36
ARHGEF40-207ENST00000556399 MOGAT3Q86VF5 341 aa12.8□□□□□ -0.36
ARHGEF40-207ENST00000556399 MAFAQ8NHW3 353 aaPredicted RBP12.8□□□□□ -0.36
ARHGEF40-207ENST00000556399 RNF2Q99496 336 aa12.8□□□□□ -0.36
ARHGEF40-207ENST00000556399 PRNDQ9UKY0 176 aa12.8□□□□□ -0.36
ARHGEF40-207ENST00000556399 UCP2P55851 309 aa12.79□□□□□ -0.36
ARHGEF40-207ENST00000556399 STARD6P59095 220 aa12.79□□□□□ -0.36
ARHGEF40-207ENST00000556399 INO80CQ6PI98 192 aaPredicted RBP12.79□□□□□ -0.36
ARHGEF40-207ENST00000556399 FA2HQ7L5A8 372 aa12.79□□□□□ -0.36
ARHGEF40-207ENST00000556399 FAM131CQ96AQ9 280 aa12.79□□□□□ -0.36
ARHGEF40-207ENST00000556399 HIF1ANQ9NWT6 349 aa12.79□□□□□ -0.36
ARHGEF40-207ENST00000556399 ATXN7O15265 892 aaPredicted RBP12.79□□□□□ -0.36
ARHGEF40-207ENST00000556399 PRDX2P32119 198 aa12.79□□□□□ -0.36
ARHGEF40-207ENST00000556399 SFRP2Q96HF1 295 aa12.79□□□□□ -0.36
ARHGEF40-207ENST00000556399 QTRT1Q9BXR0 403 aaKnown RBP12.79□□□□□ -0.36
ARHGEF40-207ENST00000556399 IGHV3OR15-7A0A075B7D8 119 aa12.79□□□□□ -0.36
ARHGEF40-207ENST00000556399 HIST3H3Q16695 136 aa12.79□□□□□ -0.36
ARHGEF40-207ENST00000556399 FAM216AQ8WUB2 273 aa12.79□□□□□ -0.36
ARHGEF40-207ENST00000556399 ZNF524Q96C55 264 aa12.79□□□□□ -0.36
ARHGEF40-207ENST00000556399 TCF21O43680 179 aa12.79□□□□□ -0.36
ARHGEF40-207ENST00000556399 SOX8P57073 446 aa12.79□□□□□ -0.36
ARHGEF40-207ENST00000556399 DEFB109BQ30KR1 87 aa12.79□□□□□ -0.36
ARHGEF40-207ENST00000556399 TGIF2LYQ8IUE0 185 aa12.79□□□□□ -0.36
ARHGEF40-207ENST00000556399 NPCDR1Q9BY65 106 aa12.79□□□□□ -0.36
ARHGEF40-207ENST00000556399 TRAV17A0A0B4J275 112 aa12.78□□□□□ -0.36
ARHGEF40-207ENST00000556399 A0A1B0GW64 132 aa12.78□□□□□ -0.36
ARHGEF40-207ENST00000556399 J3QR06 171 aa12.78□□□□□ -0.36
ARHGEF40-207ENST00000556399 TNFAIP6P98066 277 aaPredicted RBP12.78□□□□□ -0.36
ARHGEF40-207ENST00000556399 CFHR1Q03591 330 aa12.78□□□□□ -0.36
ARHGEF40-207ENST00000556399 WDFY1Q8IWB7 410 aa12.78□□□□□ -0.36
ARHGEF40-207ENST00000556399 HIST3H2BBQ8N257 126 aa12.78□□□□□ -0.36
ARHGEF40-207ENST00000556399 REPIN1Q9BWE0 567 aaKnown RBP12.78□□□□□ -0.36
ARHGEF40-207ENST00000556399 RHBDL1O75783 438 aa12.78□□□□□ -0.36
ARHGEF40-207ENST00000556399 MT-ND6P03923 174 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms