RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 TMEM56-RWDD3S4R434 201 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 HIVEP3Q5T1R4 2406 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 HIVEP1P15822 2718 aa3.72□□□□□ -1.81
ATXN3-241ENST00000556374 PHF3Q92576 2039 aaKnown RBP3.71□□□□□ -1.81
ATXN3-241ENST00000556374 PDZD2O15018 2839 aa3.71□□□□□ -1.81
ATXN3-241ENST00000556374 CRYBG3Q68DQ2 2970 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 IGKV1-27A0A075B6S5 117 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 A0A1B0GU03 582 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 C5orf49A4QMS7 147 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 ZFP92A6NM28 416 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 ZNF716A6NP11 495 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 CDRT15L2A8MXV6 281 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 SEC14L6B5MCN3 397 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 FAM157AC9JC47 383 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 C9JQL5 133 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 J3QT63 122 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 PPP1R2P9O14990 202 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 CST7O76096 145 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 ARG1P05089 322 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 SERPINA7P05543 415 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 UMODP07911 640 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 ACAA1P09110 424 aaPredicted RBP3.71□□□□□ -1.82
ATXN3-241ENST00000556374 SFTPCP11686 197 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 NQO2P16083 231 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 BCL3P20749 454 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 CD200P41217 278 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 GPM6AP51674 278 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 UCP2P55851 309 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 RPS23P62266 143 aaKnown RBP3.71□□□□□ -1.82
ATXN3-241ENST00000556374 GNG3P63215 75 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 TMEM267Q0VDI3 215 aaPredicted RBP3.71□□□□□ -1.82
ATXN3-241ENST00000556374 ZNF154Q13106 437 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 CATR1Q13166 79 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 MSMO1Q15800 293 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 IGFBP7Q16270 282 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 KRTAP27-1Q3LI81 207 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 CLEC9AQ6UXN8 241 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 P4HA3Q7Z4N8 544 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 ZNF429Q86V71 674 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 SELENOHQ8IZQ5 122 aaKnown RBP3.71□□□□□ -1.82
ATXN3-241ENST00000556374 BATF2Q8N1L9 274 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 GAPTQ8N292 157 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 TMEM217Q8N7C4 229 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 ZIC4Q8N9L1 334 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 OR10V1Q8NGI7 309 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 OR5A2Q8NGI9 324 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 OR51H1Q8NH63 302 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 HPSE2Q8WWQ2 592 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 SPSB4Q96A44 273 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 APH1AQ96BI3 265 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 PINX1Q96BK5 328 aaKnown RBP3.71□□□□□ -1.82
ATXN3-241ENST00000556374 RAB39BQ96DA2 213 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 BTF3L4Q96K17 158 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 FAM173AQ9BQD7 235 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 ZPBPQ9BS86 351 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 PSMG3Q9BT73 122 aaPredicted RBP3.71□□□□□ -1.82
ATXN3-241ENST00000556374 PKIBQ9C010 78 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 TOLLIPQ9H0E2 274 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 MAGT1Q9H0U3 335 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 WFDC1Q9HC57 220 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 SH2D2AQ9NP31 389 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 ASCL3Q9NQ33 180 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 KCNIP1Q9NZI2 227 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 MRPS18CQ9Y3D5 142 aaKnown RBP3.71□□□□□ -1.82
ATXN3-241ENST00000556374 FREM3P0C091 2139 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 CELSR2Q9HCU4 2923 aa3.71□□□□□ -1.82
ATXN3-241ENST00000556374 IGKV1-12A0A0C4DH73 117 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 UBE2L5PA0A1B0GUS4 154 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 LOC102723971A0A1B0GUV8 181 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 SLC22A20A6NK97 555 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 B4E171 279 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 C17orf112F2Z3M2 114 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 TSTD3H0UI37 97 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 H3BP45 60 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 CLDN34H7C241 214 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 SLC33A1O00400 549 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-241ENST00000556374 CYB5BO43169 146 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 TNFSF12O43508 249 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 GATCO43716 136 aaKnown RBP3.7□□□□□ -1.82
ATXN3-241ENST00000556374 ZIC3O60481 467 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 CLN5O75503 358 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 CYB5R3P00387 301 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-241ENST00000556374 IGKV1D-12P01611 117 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 MBP02144 154 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 OPN1MWP04001 364 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 GRPP07492 148 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 SRP19P09132 144 aaKnown RBP3.7□□□□□ -1.82
ATXN3-241ENST00000556374 MMP7P09237 267 aaPredicted RBP3.7□□□□□ -1.82
ATXN3-241ENST00000556374 FBP1P09467 338 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 PATE4P0C8F1 98 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 OPN1MW2P0DN77 364 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 OPN1MW3P0DN78 364 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 BCL2P10415 239 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 DAOP14920 347 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 SELEP16581 610 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 F2RP25116 425 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 MAS1LP35410 378 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 TSPAN7P41732 249 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 PSMB3P49720 205 aa3.7□□□□□ -1.82
ATXN3-241ENST00000556374 FHITP49789 147 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms