RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 OR4S2Q8NH73 311 aa7.49□□□□□ -1.21
ACTN1-218ENST00000556343 RNASE11Q8TAA1 199 aaKnown RBP7.49□□□□□ -1.21
ACTN1-218ENST00000556343 MITD1Q8WV92 249 aa7.49□□□□□ -1.21
ACTN1-218ENST00000556343 CAPSLQ8WWF8 208 aa7.49□□□□□ -1.21
ACTN1-218ENST00000556343 TMEM230Q96A57 120 aa7.49□□□□□ -1.21
ACTN1-218ENST00000556343 C18orf12Q96KH6 178 aa7.49□□□□□ -1.21
ACTN1-218ENST00000556343 SEC22CQ9BRL7 303 aa7.49□□□□□ -1.21
ACTN1-218ENST00000556343 TMEM222Q9H0R3 208 aa7.49□□□□□ -1.21
ACTN1-218ENST00000556343 SLC35D1Q9NTN3 355 aa7.49□□□□□ -1.21
ACTN1-218ENST00000556343 MAP1AP78559 2803 aaPredicted RBP7.48□□□□□ -1.21
ACTN1-218ENST00000556343 CREBBPQ92793 2442 aa7.48□□□□□ -1.21
ACTN1-218ENST00000556343 A0A1W2PRD5 423 aa7.48□□□□□ -1.21
ACTN1-218ENST00000556343 A0A1W2PRF3 423 aa7.48□□□□□ -1.21
ACTN1-218ENST00000556343 A0A1W2PRM7 423 aa7.48□□□□□ -1.21
ACTN1-218ENST00000556343 LY6LH3BQJ8 138 aa7.48□□□□□ -1.21
ACTN1-218ENST00000556343 H7C2Y5 167 aa7.48□□□□□ -1.21
ACTN1-218ENST00000556343 RBFOX2O43251 390 aaKnown RBP eCLIP7.48□□□□□ -1.21
ACTN1-218ENST00000556343 HPRT1P00492 218 aa7.48□□□□□ -1.21
ACTN1-218ENST00000556343 HRASP01112 189 aa7.48□□□□□ -1.21
ACTN1-218ENST00000556343 IGLV2-14P01704 120 aa7.48□□□□□ -1.21
ACTN1-218ENST00000556343 CT45A6P0DMU7 189 aa7.48□□□□□ -1.21
ACTN1-218ENST00000556343 CT45A5P0DMU8 189 aa7.48□□□□□ -1.21
ACTN1-218ENST00000556343 CT45A7P0DMV0 189 aa7.48□□□□□ -1.21
ACTN1-218ENST00000556343 FOSL1P15407 271 aa7.48□□□□□ -1.21
ACTN1-218ENST00000556343 UCP1P25874 307 aa7.48□□□□□ -1.21
ACTN1-218ENST00000556343 CD1BP29016 333 aa7.48□□□□□ -1.21
ACTN1-218ENST00000556343 LPAR6P43657 344 aa7.48□□□□□ -1.21
ACTN1-218ENST00000556343 EIF4EBP1Q13541 118 aaPredicted RBP7.48□□□□□ -1.21
ACTN1-218ENST00000556343 TMEM187Q14656 261 aa7.48□□□□□ -1.21
ACTN1-218ENST00000556343 PDPNQ86YL7 162 aa7.48□□□□□ -1.21
ACTN1-218ENST00000556343 SPAG16Q8N0X2 631 aa7.48□□□□□ -1.21
ACTN1-218ENST00000556343 ST6GALNAC6Q969X2 333 aa7.48□□□□□ -1.21
ACTN1-218ENST00000556343 RRNAD1Q96FB5 475 aaKnown RBP7.48□□□□□ -1.21
ACTN1-218ENST00000556343 TMEM56Q96MV1 263 aa7.48□□□□□ -1.21
ACTN1-218ENST00000556343 RNF5Q99942 180 aa7.48□□□□□ -1.21
ACTN1-218ENST00000556343 NABP2Q9BQ15 211 aa7.48□□□□□ -1.21
ACTN1-218ENST00000556343 MS4A7Q9GZW8 240 aaPredicted RBP7.48□□□□□ -1.21
ACTN1-218ENST00000556343 HILPDAQ9Y5L2 63 aa7.48□□□□□ -1.21
ACTN1-218ENST00000556343 TMEM56-RWDD3S4R434 201 aa7.48□□□□□ -1.21
ACTN1-218ENST00000556343 FLNBO75369 2602 aaKnown RBP7.48□□□□□ -1.21
ACTN1-218ENST00000556343 DSCAML1Q8TD84 2053 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 TRAV40A0A0B4J280 105 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 IGHV1-3A0A0C4DH29 117 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 HMX3A6NHT5 357 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 CDS2O95674 445 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 FBP1P09467 338 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 FAM106CPP0CH98 169 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 TRAPPC2P0DI81 140 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 TRAPPC2BP0DI82 140 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 CD99P14209 185 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 NQO2P16083 231 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 DLX1P56177 255 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 RRAS2P62070 204 aaPredicted RBP7.47□□□□□ -1.21
ACTN1-218ENST00000556343 CYCSP99999 105 aaKnown RBP7.47□□□□□ -1.21
ACTN1-218ENST00000556343 PRB3Q04118 309 aaPredicted RBP7.47□□□□□ -1.21
ACTN1-218ENST00000556343 SSX2Q16385 188 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 SP6Q3SY56 376 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 UTF1Q5T230 341 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 SPNS3Q6ZMD2 512 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 FAM219AQ8IW50 185 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 LRTM2Q8N967 370 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 ZNF383Q8NA42 475 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 DRAXINQ8NBI3 349 aaPredicted RBP7.47□□□□□ -1.21
ACTN1-218ENST00000556343 OR5AN1Q8NGI8 311 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 OR52B4Q8NGK2 314 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 OR4C13Q8NGP0 309 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 OSR1Q8TAX0 266 aaPredicted RBP7.47□□□□□ -1.21
ACTN1-218ENST00000556343 GLYATL2Q8WU03 294 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 ASB13Q8WXK3 278 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 RBPMSQ93062 196 aaKnown RBP7.47□□□□□ -1.21
ACTN1-218ENST00000556343 FLYWCH2Q96CP2 140 aaKnown RBP7.47□□□□□ -1.21
ACTN1-218ENST00000556343 TP53RKQ96S44 253 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 SPIN2AQ99865 258 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 SPIN2BQ9BPZ2 258 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 ZNF251Q9BRH9 671 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 MRPL20Q9BYC9 149 aaKnown RBP7.47□□□□□ -1.21
ACTN1-218ENST00000556343 PLEKHA2Q9HB19 425 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 RAB18Q9NP72 206 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 YAE1D1Q9NRH1 226 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 COMMD9Q9P000 198 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 CACFD1Q9UGQ2 172 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 NUP50Q9UKX7 468 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 WASHC3Q9Y3C0 194 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 TMED3Q9Y3Q3 217 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 WNK2Q9Y3S1 2297 aa7.47□□□□□ -1.21
ACTN1-218ENST00000556343 AKAP9Q99996 3911 aa7.46□□□□□ -1.21
ACTN1-218ENST00000556343 ASH1LQ9NR48 2969 aaKnown RBP7.46□□□□□ -1.21
ACTN1-218ENST00000556343 PDZD2O15018 2839 aa7.46□□□□□ -1.22
ACTN1-218ENST00000556343 hCG_2014768A0A024R1R8 64 aa7.46□□□□□ -1.22
ACTN1-218ENST00000556343 LINC00473A8K010 186 aa7.46□□□□□ -1.22
ACTN1-218ENST00000556343 A8MV72 311 aaPredicted RBP7.46□□□□□ -1.22
ACTN1-218ENST00000556343 SHOXO15266 292 aa7.46□□□□□ -1.22
ACTN1-218ENST00000556343 PROP1O75360 226 aa7.46□□□□□ -1.22
ACTN1-218ENST00000556343 VDAC1P21796 283 aa7.46□□□□□ -1.22
ACTN1-218ENST00000556343 SAA4P35542 130 aa7.46□□□□□ -1.22
ACTN1-218ENST00000556343 SRP14P37108 136 aaKnown RBP7.46□□□□□ -1.22
ACTN1-218ENST00000556343 LGALS7P47929 136 aa7.46□□□□□ -1.22
ACTN1-218ENST00000556343 REG1BP48304 166 aa7.46□□□□□ -1.22
ACTN1-218ENST00000556343 BCAP31P51572 246 aa7.46□□□□□ -1.22
ACTN1-218ENST00000556343 AKR1C2P52895 323 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms