RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 CT45A5P0DMU8 189 aa6.14□□□□□ -1.43
TDP1-214ENST00000556063 CT45A7P0DMV0 189 aa6.14□□□□□ -1.43
TDP1-214ENST00000556063 IGKV1-13P0DP09 117 aa6.14□□□□□ -1.43
TDP1-214ENST00000556063 TMEM11P17152 192 aa6.14□□□□□ -1.43
TDP1-214ENST00000556063 KIR2DS2P43631 304 aa6.14□□□□□ -1.43
TDP1-214ENST00000556063 RIPPLY3P57055 190 aa6.14□□□□□ -1.43
TDP1-214ENST00000556063 UBA52P62987 128 aaKnown RBP6.14□□□□□ -1.43
TDP1-214ENST00000556063 DIAPH2-AS1Q14236 149 aa6.14□□□□□ -1.43
TDP1-214ENST00000556063 SLC9A3R2Q15599 337 aa6.14□□□□□ -1.43
TDP1-214ENST00000556063 LY6EQ16553 131 aa6.14□□□□□ -1.43
TDP1-214ENST00000556063 BAK1Q16611 211 aa6.14□□□□□ -1.43
TDP1-214ENST00000556063 ABCA11PQ4W5N1 156 aa6.14□□□□□ -1.43
TDP1-214ENST00000556063 DHRS7BQ6IAN0 325 aaPredicted RBP6.14□□□□□ -1.43
TDP1-214ENST00000556063 C11orf88Q6PI97 169 aa6.14□□□□□ -1.43
TDP1-214ENST00000556063 IDO2Q6ZQW0 420 aa6.14□□□□□ -1.43
TDP1-214ENST00000556063 KCTD9Q7L273 389 aa6.14□□□□□ -1.43
TDP1-214ENST00000556063 CCDC71LQ8N9Z2 235 aa6.14□□□□□ -1.43
TDP1-214ENST00000556063 BVESQ8NE79 360 aa6.14□□□□□ -1.43
TDP1-214ENST00000556063 OR8H1Q8NGG4 311 aa6.14□□□□□ -1.43
TDP1-214ENST00000556063 OR5AN1Q8NGI8 311 aa6.14□□□□□ -1.43
TDP1-214ENST00000556063 OR51S1Q8NGJ8 323 aa6.14□□□□□ -1.43
TDP1-214ENST00000556063 CD300LFQ8TDQ1 290 aa6.14□□□□□ -1.43
TDP1-214ENST00000556063 CFHR4Q92496 578 aa6.14□□□□□ -1.43
TDP1-214ENST00000556063 ZNF486Q96H40 463 aaPredicted RBP6.14□□□□□ -1.43
TDP1-214ENST00000556063 RNF5Q99942 180 aa6.14□□□□□ -1.43
TDP1-214ENST00000556063 SLC25A21Q9BQT8 299 aaPredicted RBP6.14□□□□□ -1.43
TDP1-214ENST00000556063 ZNF251Q9BRH9 671 aa6.14□□□□□ -1.43
TDP1-214ENST00000556063 HRASLSQ9HDD0 168 aa6.14□□□□□ -1.43
TDP1-214ENST00000556063 TNFRSF19Q9NS68 423 aa6.14□□□□□ -1.43
TDP1-214ENST00000556063 SLC35D1Q9NTN3 355 aa6.14□□□□□ -1.43
TDP1-214ENST00000556063 SLC2A8Q9NY64 477 aa6.14□□□□□ -1.43
TDP1-214ENST00000556063 C14orf166Q9Y224 244 aaKnown RBP6.14□□□□□ -1.43
TDP1-214ENST00000556063 IGHV3-72A0A0B4J1Y9 119 aa6.13□□□□□ -1.43
TDP1-214ENST00000556063 LINC00854A0A1B0GVQ3 168 aa6.13□□□□□ -1.43
TDP1-214ENST00000556063 A6NDX4 124 aa6.13□□□□□ -1.43
TDP1-214ENST00000556063 H0YJW9 148 aa6.13□□□□□ -1.43
TDP1-214ENST00000556063 GPR137BO60478 399 aa6.13□□□□□ -1.43
TDP1-214ENST00000556063 OR2F2O95006 317 aa6.13□□□□□ -1.43
TDP1-214ENST00000556063 VENTXO95231 258 aa6.13□□□□□ -1.43
TDP1-214ENST00000556063 ZNF735P0CB33 412 aa6.13□□□□□ -1.43
TDP1-214ENST00000556063 PAX6P26367 422 aa6.13□□□□□ -1.43
TDP1-214ENST00000556063 GNRHRP30968 328 aa6.13□□□□□ -1.43
TDP1-214ENST00000556063 DUTP33316 252 aaKnown RBP6.13□□□□□ -1.43
TDP1-214ENST00000556063 DEFA1P59665 94 aa6.13□□□□□ -1.43
TDP1-214ENST00000556063 DEFA3P59666 94 aa6.13□□□□□ -1.43
TDP1-214ENST00000556063 EBI3Q14213 229 aa6.13□□□□□ -1.43
TDP1-214ENST00000556063 HNF4GQ14541 408 aa6.13□□□□□ -1.43
TDP1-214ENST00000556063 AADACL3Q5VUY0 350 aa6.13□□□□□ -1.43
TDP1-214ENST00000556063 FAAP20Q6NZ36 180 aa6.13□□□□□ -1.43
TDP1-214ENST00000556063 LHFPL1Q86WI0 220 aa6.13□□□□□ -1.43
TDP1-214ENST00000556063 PDPNQ86YL7 162 aa6.13□□□□□ -1.43
TDP1-214ENST00000556063 TCTEX1D1Q8N7M0 179 aa6.13□□□□□ -1.43
TDP1-214ENST00000556063 ZDHHC22Q8N966 263 aa6.13□□□□□ -1.43
TDP1-214ENST00000556063 ZNF383Q8NA42 475 aa6.13□□□□□ -1.43
TDP1-214ENST00000556063 DRAXINQ8NBI3 349 aaPredicted RBP6.13□□□□□ -1.43
TDP1-214ENST00000556063 OR4D10Q8NGI6 311 aa6.13□□□□□ -1.43
TDP1-214ENST00000556063 OR4C13Q8NGP0 309 aa6.13□□□□□ -1.43
TDP1-214ENST00000556063 TCTEX1D2Q8WW35 142 aa6.13□□□□□ -1.43
TDP1-214ENST00000556063 FLYWCH2Q96CP2 140 aaKnown RBP6.13□□□□□ -1.43
TDP1-214ENST00000556063 EAF1Q96JC9 268 aaPredicted RBP6.13□□□□□ -1.43
TDP1-214ENST00000556063 RBM14Q96PK6 669 aaKnown RBP6.13□□□□□ -1.43
TDP1-214ENST00000556063 DUX5Q96PT3 197 aa6.13□□□□□ -1.43
TDP1-214ENST00000556063 TSC22D3Q99576 134 aa6.13□□□□□ -1.43
TDP1-214ENST00000556063 TSNAXQ99598 290 aaKnown RBP6.13□□□□□ -1.43
TDP1-214ENST00000556063 SDHCQ99643 169 aaPredicted RBP6.13□□□□□ -1.43
TDP1-214ENST00000556063 AIFM2Q9BRQ8 373 aa6.13□□□□□ -1.43
TDP1-214ENST00000556063 SLC25A33Q9BSK2 321 aa6.13□□□□□ -1.43
TDP1-214ENST00000556063 RSRP1Q9BUV0 290 aa6.13□□□□□ -1.43
TDP1-214ENST00000556063 CHIAQ9BZP6 476 aa6.13□□□□□ -1.43
TDP1-214ENST00000556063 NPFFR1Q9GZQ6 430 aa6.13□□□□□ -1.43
TDP1-214ENST00000556063 FXYD6Q9H0Q3 95 aa6.13□□□□□ -1.43
TDP1-214ENST00000556063 KIAA1456Q9P272 454 aa6.13□□□□□ -1.43
TDP1-214ENST00000556063 COPZ2Q9P299 210 aa6.13□□□□□ -1.43
TDP1-214ENST00000556063 NCBP2LA6PVI3 153 aaKnown RBP6.12□□□□□ -1.43
TDP1-214ENST00000556063 TNFSF12O43508 249 aa6.12□□□□□ -1.43
TDP1-214ENST00000556063 PROP1O75360 226 aa6.12□□□□□ -1.43
TDP1-214ENST00000556063 PGLYRP1O75594 196 aaPredicted RBP6.12□□□□□ -1.43
TDP1-214ENST00000556063 B3GALNT1O75752 331 aa6.12□□□□□ -1.43
TDP1-214ENST00000556063 UPK1BO75841 260 aa6.12□□□□□ -1.43
TDP1-214ENST00000556063 CTSDP07339 412 aaPredicted RBP6.12□□□□□ -1.43
TDP1-214ENST00000556063 CD24P25063 80 aa6.12□□□□□ -1.43
TDP1-214ENST00000556063 LGALS7P47929 136 aa6.12□□□□□ -1.43
TDP1-214ENST00000556063 RND3P61587 244 aa6.12□□□□□ -1.43
TDP1-214ENST00000556063 RPS16P62249 146 aaKnown RBP6.12□□□□□ -1.43
TDP1-214ENST00000556063 RBMS2Q15434 407 aaKnown RBP6.12□□□□□ -1.43
TDP1-214ENST00000556063 PHLDA2Q53GA4 152 aa6.12□□□□□ -1.43
TDP1-214ENST00000556063 MZT2BQ6NZ67 158 aa6.12□□□□□ -1.43
TDP1-214ENST00000556063 GLDNQ6ZMI3 551 aaPredicted RBP6.12□□□□□ -1.43
TDP1-214ENST00000556063 ZNF818PQ6ZRF7 136 aa6.12□□□□□ -1.43
TDP1-214ENST00000556063 OR13C8Q8NGS7 320 aa6.12□□□□□ -1.43
TDP1-214ENST00000556063 OR4S2Q8NH73 311 aa6.12□□□□□ -1.43
TDP1-214ENST00000556063 OSR1Q8TAX0 266 aaPredicted RBP6.12□□□□□ -1.43
TDP1-214ENST00000556063 PIFOQ8TCI5 191 aa6.12□□□□□ -1.43
TDP1-214ENST00000556063 MARCH1Q8TCQ1 289 aa6.12□□□□□ -1.43
TDP1-214ENST00000556063 ESM1Q9NQ30 184 aa6.12□□□□□ -1.43
TDP1-214ENST00000556063 LIN7CQ9NUP9 197 aaKnown RBP6.12□□□□□ -1.43
TDP1-214ENST00000556063 MOB4Q9Y3A3 225 aa6.12□□□□□ -1.43
TDP1-214ENST00000556063 ATRQ13535 2644 aa6.11□□□□□ -1.43
TDP1-214ENST00000556063 ZNF469Q96JG9 3925 aaPredicted RBP6.11□□□□□ -1.43
TDP1-214ENST00000556063 PIGBOS1A0A0B4J2F0 54 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms