RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 BTF3L4Q96K17 158 aa13.55□□□□□ -0.24
TUBB3-209ENST00000555609 OTOGLQ3ZCN5 2332 aa13.55□□□□□ -0.24
TUBB3-209ENST00000555609 RAMP3O60896 148 aa13.55□□□□□ -0.24
TUBB3-209ENST00000555609 WISP2O76076 250 aa13.55□□□□□ -0.24
TUBB3-209ENST00000555609 IGKV1D-33P01593 117 aa13.55□□□□□ -0.24
TUBB3-209ENST00000555609 IGKV1-33P01594 117 aa13.55□□□□□ -0.24
TUBB3-209ENST00000555609 IGHG3P01860 377 aa13.55□□□□□ -0.24
TUBB3-209ENST00000555609 SOD3P08294 240 aa13.55□□□□□ -0.24
TUBB3-209ENST00000555609 ARG2P78540 354 aa13.55□□□□□ -0.24
TUBB3-209ENST00000555609 FFAR4Q5NUL3 377 aa13.55□□□□□ -0.24
TUBB3-209ENST00000555609 FAM214BQ7L5A3 538 aa13.55□□□□□ -0.24
TUBB3-209ENST00000555609 MYPOPQ86VE0 399 aaPredicted RBP13.55□□□□□ -0.24
TUBB3-209ENST00000555609 OR52L2PQ8NGH6 319 aa13.55□□□□□ -0.24
TUBB3-209ENST00000555609 GFOD1Q9NXC2 390 aa13.55□□□□□ -0.24
TUBB3-209ENST00000555609 LNP1A1A4G5 178 aa13.54□□□□□ -0.24
TUBB3-209ENST00000555609 C3orf80F5H4A9 247 aa13.54□□□□□ -0.24
TUBB3-209ENST00000555609 S1PR2O95136 353 aa13.54□□□□□ -0.24
TUBB3-209ENST00000555609 IGKV3-15P01624 115 aa13.54□□□□□ -0.24
TUBB3-209ENST00000555609 SPINK2P20155 84 aa13.54□□□□□ -0.24
TUBB3-209ENST00000555609 RPL23P62829 140 aaKnown RBP13.54□□□□□ -0.24
TUBB3-209ENST00000555609 ZNF816Q0VGE8 651 aaPredicted RBP13.54□□□□□ -0.24
TUBB3-209ENST00000555609 GUSBP1Q15486 140 aa13.54□□□□□ -0.24
TUBB3-209ENST00000555609 ADIRFQ15847 76 aa13.54□□□□□ -0.24
TUBB3-209ENST00000555609 SMIM21Q3B7S5 101 aa13.54□□□□□ -0.24
TUBB3-209ENST00000555609 ALKBH6Q3KRA9 238 aa13.54□□□□□ -0.24
TUBB3-209ENST00000555609 COA6Q5JTJ3 125 aaKnown RBP13.54□□□□□ -0.24
TUBB3-209ENST00000555609 BEND4Q6ZU67 534 aa13.54□□□□□ -0.24
TUBB3-209ENST00000555609 C5orf30Q96GV9 206 aa13.54□□□□□ -0.24
TUBB3-209ENST00000555609 NPCDR1Q9BY65 106 aa13.54□□□□□ -0.24
TUBB3-209ENST00000555609 CFAP54Q96N23 3096 aa13.54□□□□□ -0.24
TUBB3-209ENST00000555609 A0A1B0GWJ7 208 aa13.53□□□□□ -0.24
TUBB3-209ENST00000555609 C17orf98A8MV24 154 aa13.53□□□□□ -0.24
TUBB3-209ENST00000555609 H7BYZ3 331 aa13.53□□□□□ -0.24
TUBB3-209ENST00000555609 SPINT2O43291 252 aa13.53□□□□□ -0.24
TUBB3-209ENST00000555609 MPDU1O75352 247 aa13.53□□□□□ -0.24
TUBB3-209ENST00000555609 HOXC12P31275 282 aa13.53□□□□□ -0.24
TUBB3-209ENST00000555609 SRP14P37108 136 aaKnown RBP13.53□□□□□ -0.24
TUBB3-209ENST00000555609 ERVS71-1P61550 626 aa13.53□□□□□ -0.24
TUBB3-209ENST00000555609 C16orf82Q7Z2V1 217 aa13.53□□□□□ -0.24
TUBB3-209ENST00000555609 ZNF383Q8NA42 475 aa13.53□□□□□ -0.24
TUBB3-209ENST00000555609 UBALD1Q8TB05 177 aa13.53□□□□□ -0.24
TUBB3-209ENST00000555609 RAB1CQ92928 201 aa13.53□□□□□ -0.24
TUBB3-209ENST00000555609 NEIL1Q96FI4 390 aaPredicted RBP13.53□□□□□ -0.24
TUBB3-209ENST00000555609 COQ2Q96H96 371 aa13.53□□□□□ -0.24
TUBB3-209ENST00000555609 TXNDC17Q9BRA2 123 aa13.53□□□□□ -0.24
TUBB3-209ENST00000555609 GPR61Q9BZJ8 451 aa13.53□□□□□ -0.24
TUBB3-209ENST00000555609 CLN8Q9UBY8 286 aa13.53□□□□□ -0.24
TUBB3-209ENST00000555609 ATXN7O15265 892 aaPredicted RBP13.53□□□□□ -0.24
TUBB3-209ENST00000555609 MLNRO43193 412 aa13.53□□□□□ -0.24
TUBB3-209ENST00000555609 FAM3BP58499 235 aaPredicted RBP13.53□□□□□ -0.24
TUBB3-209ENST00000555609 BRWD1-AS2P59051 145 aa13.53□□□□□ -0.24
TUBB3-209ENST00000555609 AESQ08117 197 aa13.53□□□□□ -0.24
TUBB3-209ENST00000555609 RNFT1Q5M7Z0 435 aa13.53□□□□□ -0.24
TUBB3-209ENST00000555609 PLA2G2CQ5R387 149 aa13.53□□□□□ -0.24
TUBB3-209ENST00000555609 TMEM183AQ8IXX5 376 aa13.53□□□□□ -0.24
TUBB3-209ENST00000555609 OR51G1Q8NGK1 321 aa13.53□□□□□ -0.24
TUBB3-209ENST00000555609 ACY3Q96HD9 319 aa13.53□□□□□ -0.24
TUBB3-209ENST00000555609 PARLQ9H300 379 aa13.53□□□□□ -0.24
TUBB3-209ENST00000555609 ZG16O60844 167 aa13.52□□□□□ -0.25
TUBB3-209ENST00000555609 HRASP01112 189 aa13.52□□□□□ -0.25
TUBB3-209ENST00000555609 MPV17P39210 176 aa13.52□□□□□ -0.25
TUBB3-209ENST00000555609 GABRA2P47869 451 aa13.52□□□□□ -0.25
TUBB3-209ENST00000555609 WDR82Q6UXN9 313 aa13.52□□□□□ -0.25
TUBB3-209ENST00000555609 FAM90A1Q86YD7 464 aa13.52□□□□□ -0.25
TUBB3-209ENST00000555609 ZNF808Q8N4W9 903 aaPredicted RBP13.52□□□□□ -0.25
TUBB3-209ENST00000555609 OR4X1Q8NH49 305 aa13.52□□□□□ -0.25
TUBB3-209ENST00000555609 OR52E5Q8NH55 327 aa13.52□□□□□ -0.25
TUBB3-209ENST00000555609 OR5R1Q8NH85 324 aa13.52□□□□□ -0.25
TUBB3-209ENST00000555609 RNASEH2CQ8TDP1 164 aaKnown RBP13.52□□□□□ -0.25
TUBB3-209ENST00000555609 RAB24Q969Q5 203 aa13.52□□□□□ -0.25
TUBB3-209ENST00000555609 ZNF292O60281 2723 aa13.51□□□□□ -0.25
TUBB3-209ENST00000555609 DVL1O14640 695 aa13.51□□□□□ -0.25
TUBB3-209ENST00000555609 PDE6DO43924 150 aa13.51□□□□□ -0.25
TUBB3-209ENST00000555609 IFNA10P01566 189 aa13.51□□□□□ -0.25
TUBB3-209ENST00000555609 CD55P08174 381 aa13.51□□□□□ -0.25
TUBB3-209ENST00000555609 CD99P14209 185 aa13.51□□□□□ -0.25
TUBB3-209ENST00000555609 NBL1P41271 181 aa13.51□□□□□ -0.25
TUBB3-209ENST00000555609 GALR1P47211 349 aa13.51□□□□□ -0.25
TUBB3-209ENST00000555609 ZNF718Q3SXZ3 478 aa13.51□□□□□ -0.25
TUBB3-209ENST00000555609 OR4F5Q8NH21 305 aa13.51□□□□□ -0.25
TUBB3-209ENST00000555609 OR4F4Q96R69 305 aa13.51□□□□□ -0.25
TUBB3-209ENST00000555609 SLC25A22Q9H936 323 aa13.51□□□□□ -0.25
TUBB3-209ENST00000555609 GVINP1Q7Z2Y8 2422 aa13.51□□□□□ -0.25
TUBB3-209ENST00000555609 DMXL1Q9Y485 3027 aa13.51□□□□□ -0.25
TUBB3-209ENST00000555609 PPP5D1E7EU14 171 aa13.5□□□□□ -0.25
TUBB3-209ENST00000555609 RBFOX2O43251 390 aaKnown RBP eCLIP13.5□□□□□ -0.25
TUBB3-209ENST00000555609 LYZL6O75951 148 aa13.5□□□□□ -0.25
TUBB3-209ENST00000555609 TYMSP04818 313 aa13.5□□□□□ -0.25
TUBB3-209ENST00000555609 GZMHP20718 246 aa13.5□□□□□ -0.25
TUBB3-209ENST00000555609 CD82P27701 267 aa13.5□□□□□ -0.25
TUBB3-209ENST00000555609 CEBPDP49716 269 aaPredicted RBP13.5□□□□□ -0.25
TUBB3-209ENST00000555609 TNFSF10P50591 281 aa13.5□□□□□ -0.25
TUBB3-209ENST00000555609 PDLIM3Q53GG5 364 aaPredicted RBP13.5□□□□□ -0.25
TUBB3-209ENST00000555609 MBNL2Q5VZF2 373 aaKnown RBP13.5□□□□□ -0.25
TUBB3-209ENST00000555609 FAM180AQ6UWF9 173 aa13.5□□□□□ -0.25
TUBB3-209ENST00000555609 MRGPRDQ8TDS7 321 aa13.5□□□□□ -0.25
TUBB3-209ENST00000555609 IMMP2LQ96T52 175 aa13.5□□□□□ -0.25
TUBB3-209ENST00000555609 WDR83OSQ9Y284 106 aa13.5□□□□□ -0.25
TUBB3-209ENST00000555609 ESPL1Q14674 2120 aa13.5□□□□□ -0.25
TUBB3-209ENST00000555609 FAM186AA6NE01 2351 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms