RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 PHYHO14832 338 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 CRXO43186 299 aaPredicted RBP0.32□□□□□ -2.36
SRP54-207ENST00000555535 ATP6V1G2O95670 118 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 HBZP02008 142 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 C1QCP02747 245 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 CD7P09564 240 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 LIMS3P0CW19 117 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 LIMS4P0CW20 117 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 SYT1P21579 422 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 OR1E2P47887 323 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 IDH3GP51553 393 aaPredicted RBP0.32□□□□□ -2.36
SRP54-207ENST00000555535 CTBP2P56545 445 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 HOXC5Q00444 222 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 VAMP3Q15836 100 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 LRRC75BQ2VPJ9 315 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 PABPC1L2AQ5JQF8 200 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 SAPCD1Q5SSQ6 148 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 C7orf65Q6ZTY9 151 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 FP248Q71RG6 208 aaPredicted RBP0.32□□□□□ -2.36
SRP54-207ENST00000555535 MTERF4Q7Z6M4 381 aaKnown RBP0.32□□□□□ -2.36
SRP54-207ENST00000555535 MRPL52Q86TS9 123 aaKnown RBP0.32□□□□□ -2.36
SRP54-207ENST00000555535 SLC13A5Q86YT5 568 aaPredicted RBP0.32□□□□□ -2.36
SRP54-207ENST00000555535 PLCZ1Q86YW0 608 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 C1orf174Q8IYL3 243 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 LRRC34Q8IZ02 419 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 OR13C8Q8NGS7 320 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 OR2Y1Q8NGV0 311 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 OR5K1Q8NHB7 308 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 RNASEH2CQ8TDP1 164 aaKnown RBP0.32□□□□□ -2.36
SRP54-207ENST00000555535 TNFAIP8L1Q8WVP5 186 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 RNF133Q8WVZ7 376 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 TMEM239Q8WW34 195 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 C12orf43Q96C57 262 aaKnown RBP0.32□□□□□ -2.36
SRP54-207ENST00000555535 TMA16Q96EY4 203 aaKnown RBP0.32□□□□□ -2.36
SRP54-207ENST00000555535 ACY3Q96HD9 319 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 SLC35G5Q96KT7 338 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 FAM210AQ96ND0 272 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 SERPINB11Q96P15 392 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 POLR3HQ9Y535 204 aaPredicted RBP0.32□□□□□ -2.36
SRP54-207ENST00000555535 DISP1Q96F81 1524 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 CASP8AP2Q9UKL3 1982 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 REREQ9P2R6 1566 aa0.32□□□□□ -2.36
SRP54-207ENST00000555535 THSD7AQ9UPZ6 1657 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 GRIN2BQ13224 1484 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 TMEM269A0A1B0GVZ9 245 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 A0A1B0GX12 115 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 METTL15A6NJ78 407 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 H3BT86 120 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 M0R381 172 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 CST4P01036 141 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 NQO2P16083 231 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 AGTR1P30556 359 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 OR10J1P30954 320 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 HSPA9P38646 679 aaKnown RBP0.31□□□□□ -2.36
SRP54-207ENST00000555535 AKR1C3P42330 323 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 CA7P43166 264 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 STC1P52823 247 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 RAB8AP61006 207 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 FGF12P61328 243 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 RELAQ04206 551 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 TMEM267Q0VDI3 215 aaPredicted RBP0.31□□□□□ -2.36
SRP54-207ENST00000555535 MOGQ16653 247 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 FAM201AQ5SY85 155 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 TMEM42Q69YG0 159 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 FAM173BQ6P4H8 233 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 SCGB1D4Q6XE38 83 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 SPATA24Q86W54 205 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 RNASE6Q93091 150 aaKnown RBP0.31□□□□□ -2.36
SRP54-207ENST00000555535 CCDC124Q96CT7 223 aaKnown RBP0.31□□□□□ -2.36
SRP54-207ENST00000555535 SFRP2Q96HF1 295 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 ODF3Q96PU9 254 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 IMMP2LQ96T52 175 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 CYTH2Q99418 400 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 DOHHQ9BU89 302 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 ADAT1Q9BUB4 502 aaKnown RBP0.31□□□□□ -2.36
SRP54-207ENST00000555535 VCX3BQ9H321 246 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 AGPAT3Q9NRZ7 376 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 NRBP2Q9NSY0 501 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 MS4A12Q9NXJ0 267 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 NAT8Q9UHE5 227 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 HDGFL3Q9Y3E1 203 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 C22orf24Q9Y442 160 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 LAMA4Q16363 1823 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 FLT4P35916 1363 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 DOCK5Q9H7D0 1870 aa0.31□□□□□ -2.36
SRP54-207ENST00000555535 SCN10AQ9Y5Y9 1956 aa0.3□□□□□ -2.36
SRP54-207ENST00000555535 CUL9Q8IWT3 2517 aa0.3□□□□□ -2.36
SRP54-207ENST00000555535 TRAV38-1A0A0B4J264 116 aa0.3□□□□□ -2.36
SRP54-207ENST00000555535 GOLGA8QA0A0J9YX86 632 aa0.3□□□□□ -2.36
SRP54-207ENST00000555535 DAPL1A0PJW8 107 aa0.3□□□□□ -2.36
SRP54-207ENST00000555535 SMLR1H3BR10 107 aa0.3□□□□□ -2.36
SRP54-207ENST00000555535 LIN7AO14910 233 aaPredicted RBP0.3□□□□□ -2.36
SRP54-207ENST00000555535 HCRTO43612 131 aa0.3□□□□□ -2.36
SRP54-207ENST00000555535 HLA-DQB2P05538 268 aa0.3□□□□□ -2.36
SRP54-207ENST00000555535 GP1BAP07359 652 aa0.3□□□□□ -2.36
SRP54-207ENST00000555535 UBBP0CG47 229 aa0.3□□□□□ -2.36
SRP54-207ENST00000555535 CCL2P13500 99 aa0.3□□□□□ -2.36
SRP54-207ENST00000555535 IL9P15248 144 aa0.3□□□□□ -2.36
SRP54-207ENST00000555535 F8A1P23610 371 aa0.3□□□□□ -2.36
SRP54-207ENST00000555535 CCR7P32248 378 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms