RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 SOX21Q9Y651 276 aaPredicted RBP8.32□□□□□ -1.08
NEK9-205ENST00000555405 FXYD6-FXYD2A0A087WZ82 144 aa8.31□□□□□ -1.08
NEK9-205ENST00000555405 C7orf66A4D0T2 115 aa8.31□□□□□ -1.08
NEK9-205ENST00000555405 TSC22D2O75157 780 aa8.31□□□□□ -1.08
NEK9-205ENST00000555405 RPS16P62249 146 aaKnown RBP8.31□□□□□ -1.08
NEK9-205ENST00000555405 GGNBP1Q5YKI7 109 aa8.31□□□□□ -1.08
NEK9-205ENST00000555405 SLC35G3Q8N808 338 aa8.31□□□□□ -1.08
NEK9-205ENST00000555405 MSI2Q96DH6 328 aaKnown RBP8.31□□□□□ -1.08
NEK9-205ENST00000555405 SEBOXQ9HB31 216 aaPredicted RBP8.31□□□□□ -1.08
NEK9-205ENST00000555405 ZC4H2Q9NQZ6 224 aa8.31□□□□□ -1.08
NEK9-205ENST00000555405 SLC35D1Q9NTN3 355 aa8.31□□□□□ -1.08
NEK9-205ENST00000555405 OPN4Q9UHM6 478 aa8.31□□□□□ -1.08
NEK9-205ENST00000555405 IGHV2-70DA0A0C4DH43 119 aa8.31□□□□□ -1.08
NEK9-205ENST00000555405 S1PR2O95136 353 aa8.31□□□□□ -1.08
NEK9-205ENST00000555405 MSMBP08118 114 aa8.31□□□□□ -1.08
NEK9-205ENST00000555405 RAG2P55895 527 aa8.31□□□□□ -1.08
NEK9-205ENST00000555405 UCP3P55916 312 aa8.31□□□□□ -1.08
NEK9-205ENST00000555405 IL17RELQ6ZVW7 336 aa8.31□□□□□ -1.08
NEK9-205ENST00000555405 Q71RC1 249 aaPredicted RBP8.31□□□□□ -1.08
NEK9-205ENST00000555405 ZNF554Q86TJ5 538 aa8.31□□□□□ -1.08
NEK9-205ENST00000555405 RANBP3Q9H6Z4 567 aaPredicted RBP8.31□□□□□ -1.08
NEK9-205ENST00000555405 BEX4Q9NWD9 120 aaPredicted RBP8.31□□□□□ -1.08
NEK9-205ENST00000555405 COMMD9Q9P000 198 aa8.31□□□□□ -1.08
NEK9-205ENST00000555405 PIPOXQ9P0Z9 390 aa8.31□□□□□ -1.08
NEK9-205ENST00000555405 AUP1Q9Y679 476 aa8.31□□□□□ -1.08
NEK9-205ENST00000555405 F8P00451 2351 aa8.31□□□□□ -1.08
NEK9-205ENST00000555405 SNRPGP15A8MWD9 76 aa8.31□□□□□ -1.08
NEK9-205ENST00000555405 SLC25A16P16260 332 aa8.31□□□□□ -1.08
NEK9-205ENST00000555405 TMEM187Q14656 261 aa8.31□□□□□ -1.08
NEK9-205ENST00000555405 THOC7Q6I9Y2 204 aaKnown RBP8.31□□□□□ -1.08
NEK9-205ENST00000555405 LIAT1Q6ZQX7 453 aa8.31□□□□□ -1.08
NEK9-205ENST00000555405 GRPEL2Q8TAA5 225 aa8.31□□□□□ -1.08
NEK9-205ENST00000555405 MITD1Q8WV92 249 aa8.31□□□□□ -1.08
NEK9-205ENST00000555405 KIAA1324LA8MWY0 1029 aaPredicted RBP8.3□□□□□ -1.08
NEK9-205ENST00000555405 B4DSR2 109 aa8.3□□□□□ -1.08
NEK9-205ENST00000555405 SHOXO15266 292 aa8.3□□□□□ -1.08
NEK9-205ENST00000555405 OR2F2O95006 317 aa8.3□□□□□ -1.08
NEK9-205ENST00000555405 IGLV2-14P01704 120 aa8.3□□□□□ -1.08
NEK9-205ENST00000555405 H2BFSP57053 126 aa8.3□□□□□ -1.08
NEK9-205ENST00000555405 DSCR9P59020 149 aa8.3□□□□□ -1.08
NEK9-205ENST00000555405 ZFP69Q49AA0 526 aa8.3□□□□□ -1.08
NEK9-205ENST00000555405 OR10C1Q96KK4 312 aa8.3□□□□□ -1.08
NEK9-205ENST00000555405 ALX4Q9H161 411 aaPredicted RBP8.3□□□□□ -1.08
NEK9-205ENST00000555405 LIN7CQ9NUP9 197 aaKnown RBP8.3□□□□□ -1.08
NEK9-205ENST00000555405 BOLA1Q9Y3E2 137 aa8.3□□□□□ -1.08
NEK9-205ENST00000555405 HTR1DP28221 377 aa8.3□□□□□ -1.08
NEK9-205ENST00000555405 DLX6P56179 175 aa8.3□□□□□ -1.08
NEK9-205ENST00000555405 SLC25A48Q6ZT89 311 aaKnown RBP8.3□□□□□ -1.08
NEK9-205ENST00000555405 ZBTB8BQ8NAP8 495 aaPredicted RBP8.3□□□□□ -1.08
NEK9-205ENST00000555405 OR1S1Q8NH92 325 aa8.3□□□□□ -1.08
NEK9-205ENST00000555405 AKR1E2Q96JD6 320 aa8.3□□□□□ -1.08
NEK9-205ENST00000555405 ZNF436Q9C0F3 470 aaPredicted RBP8.3□□□□□ -1.08
NEK9-205ENST00000555405 F5H0A9 414 aaPredicted RBP8.3□□□□□ -1.08
NEK9-205ENST00000555405 RNASEK-C17orf49H0YIS7 233 aa8.3□□□□□ -1.08
NEK9-205ENST00000555405 APELAP0DMC3 54 aa8.3□□□□□ -1.08
NEK9-205ENST00000555405 IL3RAP26951 378 aa8.3□□□□□ -1.08
NEK9-205ENST00000555405 DUTP33316 252 aaKnown RBP8.3□□□□□ -1.08
NEK9-205ENST00000555405 CR1LQ2VPA4 569 aa8.3□□□□□ -1.08
NEK9-205ENST00000555405 TMEM222Q9H0R3 208 aa8.3□□□□□ -1.08
NEK9-205ENST00000555405 FAM96BQ9Y3D0 163 aa8.3□□□□□ -1.08
NEK9-205ENST00000555405 RNF212BA8MTL3 300 aa8.29□□□□□ -1.08
NEK9-205ENST00000555405 WRBO00258 174 aa8.29□□□□□ -1.08
NEK9-205ENST00000555405 IGKV1-16P04430 117 aa8.29□□□□□ -1.08
NEK9-205ENST00000555405 PRTN3P24158 256 aa8.29□□□□□ -1.08
NEK9-205ENST00000555405 OR2B8PP59922 312 aa8.29□□□□□ -1.08
NEK9-205ENST00000555405 PLGLAQ15195 96 aa8.29□□□□□ -1.08
NEK9-205ENST00000555405 GPR157Q5UAW9 335 aa8.29□□□□□ -1.08
NEK9-205ENST00000555405 ZNF383Q8NA42 475 aa8.29□□□□□ -1.08
NEK9-205ENST00000555405 TMEM186Q96B77 213 aa8.29□□□□□ -1.08
NEK9-205ENST00000555405 ST6GAL2Q96JF0 529 aa8.29□□□□□ -1.08
NEK9-205ENST00000555405 APOA2P02652 100 aa8.29□□□□□ -1.08
NEK9-205ENST00000555405 TMEM249Q2WGJ8 235 aa8.29□□□□□ -1.08
NEK9-205ENST00000555405 HLA-DRB5Q30154 266 aa8.29□□□□□ -1.08
NEK9-205ENST00000555405 SELENOHQ8IZQ5 122 aaKnown RBP8.29□□□□□ -1.08
NEK9-205ENST00000555405 ZNF596Q8TC21 504 aa8.29□□□□□ -1.08
NEK9-205ENST00000555405 RBPMSQ93062 196 aaKnown RBP8.29□□□□□ -1.08
NEK9-205ENST00000555405 ZNF486Q96H40 463 aaPredicted RBP8.29□□□□□ -1.08
NEK9-205ENST00000555405 CT45A6P0DMU7 189 aa8.28□□□□□ -1.08
NEK9-205ENST00000555405 CT45A5P0DMU8 189 aa8.28□□□□□ -1.08
NEK9-205ENST00000555405 CT45A7P0DMV0 189 aa8.28□□□□□ -1.08
NEK9-205ENST00000555405 ERVK-16P61578 105 aa8.28□□□□□ -1.08
NEK9-205ENST00000555405 PAX5Q02548 391 aa8.28□□□□□ -1.08
NEK9-205ENST00000555405 H2BFWTQ7Z2G1 175 aa8.28□□□□□ -1.08
NEK9-205ENST00000555405 LY6G5BQ8NDX9 201 aa8.28□□□□□ -1.08
NEK9-205ENST00000555405 OR52M1Q8NGK5 317 aa8.28□□□□□ -1.08
NEK9-205ENST00000555405 HSD17B10Q99714 261 aaKnown RBP8.28□□□□□ -1.08
NEK9-205ENST00000555405 DPM3Q9P2X0 92 aa8.28□□□□□ -1.08
NEK9-205ENST00000555405 CACNG5Q9UF02 275 aa8.28□□□□□ -1.08
NEK9-205ENST00000555405 A0A0G2JRQ6 117 aa8.28□□□□□ -1.08
NEK9-205ENST00000555405 VWC2LB2RUY7 222 aa8.28□□□□□ -1.08
NEK9-205ENST00000555405 H3BP45 60 aa8.28□□□□□ -1.08
NEK9-205ENST00000555405 BUB1B-PAK6H3BSN5 160 aa8.28□□□□□ -1.08
NEK9-205ENST00000555405 SULT1A3P0DMM9 295 aa8.28□□□□□ -1.08
NEK9-205ENST00000555405 SULT1A4P0DMN0 295 aa8.28□□□□□ -1.08
NEK9-205ENST00000555405 IGHV4-38-2P0DP08 117 aa8.28□□□□□ -1.08
NEK9-205ENST00000555405 ZNF585BQ52M93 769 aa8.28□□□□□ -1.08
NEK9-205ENST00000555405 CLEC9AQ6UXN8 241 aa8.28□□□□□ -1.08
NEK9-205ENST00000555405 PPP1R1CQ8WVI7 109 aa8.28□□□□□ -1.08
NEK9-205ENST00000555405 R3HDM4Q96D70 268 aa8.28□□□□□ -1.08
NEK9-205ENST00000555405 TBX15Q96SF7 602 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms