RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 POMT1Q9Y6A1 747 aa8.83□□□□□ -1
SHMT2-218ENST00000555213 A0A1W2PPE3 182 aa8.82□□□□□ -1
SHMT2-218ENST00000555213 DBX1A6NMT0 343 aa8.82□□□□□ -1
SHMT2-218ENST00000555213 CLDN34H7C241 214 aa8.82□□□□□ -1
SHMT2-218ENST00000555213 HOXA3O43365 443 aaPredicted RBP8.82□□□□□ -1
SHMT2-218ENST00000555213 TXNL1O43396 289 aa8.82□□□□□ -1
SHMT2-218ENST00000555213 SFT2D2O95562 160 aa8.82□□□□□ -1
SHMT2-218ENST00000555213 AKR1C4P17516 323 aa8.82□□□□□ -1
SHMT2-218ENST00000555213 BRS3P32247 399 aa8.82□□□□□ -1
SHMT2-218ENST00000555213 ECI1P42126 302 aa8.82□□□□□ -1
SHMT2-218ENST00000555213 UBE2MP61081 183 aaKnown RBP8.82□□□□□ -1
SHMT2-218ENST00000555213 CBX3Q13185 183 aa8.82□□□□□ -1
SHMT2-218ENST00000555213 EIF4EBP1Q13541 118 aaPredicted RBP8.82□□□□□ -1
SHMT2-218ENST00000555213 TUSC1Q2TAM9 212 aa8.82□□□□□ -1
SHMT2-218ENST00000555213 TMEM128Q5BJH2 165 aa8.82□□□□□ -1
SHMT2-218ENST00000555213 LY6G6FQ5SQ64 297 aa8.82□□□□□ -1
SHMT2-218ENST00000555213 TPTE2P1Q5T6R2 138 aa8.82□□□□□ -1
SHMT2-218ENST00000555213 ZNF818PQ6ZRF7 136 aa8.82□□□□□ -1
SHMT2-218ENST00000555213 SLC25A48Q6ZT89 311 aaKnown RBP8.82□□□□□ -1
SHMT2-218ENST00000555213 LYG2Q86SG7 212 aa8.82□□□□□ -1
SHMT2-218ENST00000555213 ZNF439Q8NDP4 499 aa8.82□□□□□ -1
SHMT2-218ENST00000555213 ZFAND1Q8TCF1 268 aa8.82□□□□□ -1
SHMT2-218ENST00000555213 PIPOXQ9P0Z9 390 aa8.82□□□□□ -1
SHMT2-218ENST00000555213 HILPDAQ9Y5L2 63 aa8.82□□□□□ -1
SHMT2-218ENST00000555213 SOX21Q9Y651 276 aaPredicted RBP8.82□□□□□ -1
SHMT2-218ENST00000555213 CRYM-AS1A6NIL9 109 aa8.81□□□□□ -1
SHMT2-218ENST00000555213 ITGB1BP1O14713 200 aa8.81□□□□□ -1
SHMT2-218ENST00000555213 HSD17B6O14756 317 aa8.81□□□□□ -1
SHMT2-218ENST00000555213 PGLYRP1O75594 196 aaPredicted RBP8.81□□□□□ -1
SHMT2-218ENST00000555213 PGAM2P15259 253 aa8.81□□□□□ -1
SHMT2-218ENST00000555213 HLA-GP17693 338 aa8.81□□□□□ -1
SHMT2-218ENST00000555213 IER3P46695 156 aa8.81□□□□□ -1
SHMT2-218ENST00000555213 RND3P61587 244 aa8.81□□□□□ -1
SHMT2-218ENST00000555213 ANKRD55Q3KP44 614 aa8.81□□□□□ -1
SHMT2-218ENST00000555213 SLC38A6Q8IZM9 456 aa8.81□□□□□ -1
SHMT2-218ENST00000555213 LYG1Q8N1E2 194 aa8.81□□□□□ -1
SHMT2-218ENST00000555213 BVESQ8NE79 360 aa8.81□□□□□ -1
SHMT2-218ENST00000555213 FAM216AQ8WUB2 273 aa8.81□□□□□ -1
SHMT2-218ENST00000555213 MITD1Q8WV92 249 aa8.81□□□□□ -1
SHMT2-218ENST00000555213 C17orf50Q8WW18 174 aa8.81□□□□□ -1
SHMT2-218ENST00000555213 GPHA2Q96T91 129 aa8.81□□□□□ -1
SHMT2-218ENST00000555213 SLC5A7Q9GZV3 580 aa8.81□□□□□ -1
SHMT2-218ENST00000555213 MEGF9Q9H1U4 602 aa8.81□□□□□ -1
SHMT2-218ENST00000555213 PRR13Q9NZ81 148 aa8.81□□□□□ -1
SHMT2-218ENST00000555213 VPREB3Q9UKI3 123 aa8.81□□□□□ -1
SHMT2-218ENST00000555213 RNF150Q9ULK6 438 aa8.81□□□□□ -1
SHMT2-218ENST00000555213 H3BUX3 64 aa8.8□□□□□ -1
SHMT2-218ENST00000555213 SLC31A2O15432 143 aa8.8□□□□□ -1
SHMT2-218ENST00000555213 MPPED1O15442 326 aa8.8□□□□□ -1
SHMT2-218ENST00000555213 PFDN1O60925 122 aa8.8□□□□□ -1
SHMT2-218ENST00000555213 DUS4LO95620 317 aaKnown RBP8.8□□□□□ -1
SHMT2-218ENST00000555213 IGHV4-59P01825 116 aa8.8□□□□□ -1
SHMT2-218ENST00000555213 GAPDHP04406 335 aaKnown RBP8.8□□□□□ -1
SHMT2-218ENST00000555213 RNASE1P07998 156 aaKnown RBP8.8□□□□□ -1
SHMT2-218ENST00000555213 OR8U9P0C7N5 309 aa8.8□□□□□ -1
SHMT2-218ENST00000555213 DYNLT3P51808 116 aa8.8□□□□□ -1
SHMT2-218ENST00000555213 LUMP51884 338 aaPredicted RBP8.8□□□□□ -1
SHMT2-218ENST00000555213 PIGPP57054 158 aa8.8□□□□□ -1
SHMT2-218ENST00000555213 BRWD1-AS2P59051 145 aa8.8□□□□□ -1
SHMT2-218ENST00000555213 TAS2R31P59538 309 aa8.8□□□□□ -1
SHMT2-218ENST00000555213 HERV-K104P61576 105 aa8.8□□□□□ -1
SHMT2-218ENST00000555213 UBA52P62987 128 aaKnown RBP8.8□□□□□ -1
SHMT2-218ENST00000555213 TMEM187Q14656 261 aa8.8□□□□□ -1
SHMT2-218ENST00000555213 SLC9A3R2Q15599 337 aa8.8□□□□□ -1
SHMT2-218ENST00000555213 C4orf46Q504U0 113 aa8.8□□□□□ -1
SHMT2-218ENST00000555213 PHLDA2Q53GA4 152 aa8.8□□□□□ -1
SHMT2-218ENST00000555213 CT45A1Q5HYN5 189 aa8.8□□□□□ -1
SHMT2-218ENST00000555213 LPCAT3Q6P1A2 487 aa8.8□□□□□ -1
SHMT2-218ENST00000555213 LIAT1Q6ZQX7 453 aa8.8□□□□□ -1
SHMT2-218ENST00000555213 OR8H3Q8N146 312 aa8.8□□□□□ -1
SHMT2-218ENST00000555213 C12orf45Q8N5I9 185 aaPredicted RBP8.8□□□□□ -1
SHMT2-218ENST00000555213 OR8U1Q8NH10 309 aa8.8□□□□□ -1
SHMT2-218ENST00000555213 CT45A3Q8NHU0 189 aa8.8□□□□□ -1
SHMT2-218ENST00000555213 GLYATL2Q8WU03 294 aa8.8□□□□□ -1
SHMT2-218ENST00000555213 SECTM1Q8WVN6 248 aa8.8□□□□□ -1
SHMT2-218ENST00000555213 GALNT14Q96FL9 552 aa8.8□□□□□ -1
SHMT2-218ENST00000555213 ZNF486Q96H40 463 aaPredicted RBP8.8□□□□□ -1
SHMT2-218ENST00000555213 FYTTD1Q96QD9 318 aaKnown RBP8.8□□□□□ -1
SHMT2-218ENST00000555213 S1PR3Q99500 378 aa8.8□□□□□ -1
SHMT2-218ENST00000555213 SSX3Q99909 188 aa8.8□□□□□ -1
SHMT2-218ENST00000555213 MED28Q9H204 178 aa8.8□□□□□ -1
SHMT2-218ENST00000555213 GPN1Q9HCN4 374 aaPredicted RBP8.8□□□□□ -1
SHMT2-218ENST00000555213 RAB18Q9NP72 206 aa8.8□□□□□ -1
SHMT2-218ENST00000555213 SLC2A9Q9NRM0 540 aa8.8□□□□□ -1
SHMT2-218ENST00000555213 TNFRSF19Q9NS68 423 aa8.8□□□□□ -1
SHMT2-218ENST00000555213 PITPNC1Q9UKF7 332 aa8.8□□□□□ -1
SHMT2-218ENST00000555213 RBM7Q9Y580 266 aaKnown RBP8.8□□□□□ -1
SHMT2-218ENST00000555213 A0A0B4J2A0 478 aa8.79□□□□□ -1
SHMT2-218ENST00000555213 G3V3Q6 166 aa8.79□□□□□ -1
SHMT2-218ENST00000555213 LY6LH3BQJ8 138 aa8.79□□□□□ -1
SHMT2-218ENST00000555213 GPR31O00270 319 aa8.79□□□□□ -1
SHMT2-218ENST00000555213 RAB29O14966 203 aa8.79□□□□□ -1
SHMT2-218ENST00000555213 ST8SIA5O15466 376 aa8.79□□□□□ -1
SHMT2-218ENST00000555213 CREBL2O60519 120 aaPredicted RBP8.79□□□□□ -1
SHMT2-218ENST00000555213 CCNKO75909 580 aa8.79□□□□□ -1
SHMT2-218ENST00000555213 OR2A4O95047 310 aa8.79□□□□□ -1
SHMT2-218ENST00000555213 VENTXO95231 258 aa8.79□□□□□ -1
SHMT2-218ENST00000555213 GPR12P47775 334 aa8.79□□□□□ -1
SHMT2-218ENST00000555213 ZNF137PP52743 207 aa8.79□□□□□ -1
SHMT2-218ENST00000555213 ZNF816Q0VGE8 651 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms