RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 LHFPL4Q7Z7J7 247 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 LINC01551Q86U37 167 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 ZNF573Q86YE8 665 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 DOLPP1Q86YN1 238 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 SIGLECL1Q8N7X8 197 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 OR5AU1Q8NGC0 362 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 SNIP1Q8TAD8 396 aaKnown RBP7.51□□□□□ -1.21
SYNE2-217ENST00000555022 DNASE2BQ8WZ79 361 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 ACY3Q96HD9 319 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 RCHY1Q96PM5 261 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 RAB40CQ96S21 281 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 OR2H1Q9GZK4 316 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 OR2D2Q9H210 308 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 NAT8BQ9UHF3 227 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 TP53TG3Q9ULZ0 132 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 MRPS18CQ9Y3D5 142 aaKnown RBP7.51□□□□□ -1.21
SYNE2-217ENST00000555022 hCG_38984A0A1B0GV85 526 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 H0Y980 276 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 TP53I11O14683 189 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 CD24P25063 80 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 TPPP2P59282 170 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 FGFRL1Q8N441 504 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 OR52L2PQ8NGH6 319 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 DCTN5Q9BTE1 182 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 SSBP3Q9BWW4 388 aaPredicted RBP7.51□□□□□ -1.21
SYNE2-217ENST00000555022 C12orf49Q9H741 205 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 OR2W1Q9Y3N9 320 aa7.51□□□□□ -1.21
SYNE2-217ENST00000555022 TBL2Q9Y4P3 447 aaKnown RBP7.51□□□□□ -1.21
SYNE2-217ENST00000555022 ARL14EPLP0DKL9 152 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 DRD1P21728 446 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 HTD2P86397 168 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 PMCHL1Q16048 86 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 Q56UQ5 140 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 GUSBP11Q6P575 273 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 OR5L2Q8NGL0 311 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 WDYHV1Q96HA8 205 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 MIEN1Q9BRT3 115 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 TMEM38BQ9NVV0 291 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 OBP2AQ9NY56 170 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 FZR1Q9UM11 496 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 KIR2DL5BA0A0G2JN68 375 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 KIR2DL5BA0A0G2JPC4 375 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 DEGS1O15121 323 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 CRYGSP22914 178 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 LINC00310P59036 64 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 RPL30P62888 115 aaKnown RBP7.5□□□□□ -1.21
SYNE2-217ENST00000555022 SUMO1P63165 101 aaKnown RBP7.5□□□□□ -1.21
SYNE2-217ENST00000555022 VAMP3Q15836 100 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 TPTE2P1Q5T6R2 138 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 KIR2DL5AQ8N109 375 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 OCC1Q8TAD7 63 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 MBD3L1Q8WWY6 194 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 R3HDM4Q96D70 268 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 VPS25Q9BRG1 176 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 PRRG4Q9BZD6 226 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 RNASE7Q9H1E1 156 aaKnown RBP7.5□□□□□ -1.21
SYNE2-217ENST00000555022 TNCP24821 2201 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 SPTBN2O15020 2390 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 CTXND1A0A1B0GTU2 59 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 ZNF503-AS2A6NEH8 195 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 LILRA5A6NI73 299 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 TOX3O15405 576 aaPredicted RBP7.5□□□□□ -1.21
SYNE2-217ENST00000555022 SNAI2O43623 268 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 PAX1P15863 534 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 MSX1P28360 303 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 EDDM3AQ14507 147 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 ZNF585BQ52M93 769 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 PCSK4Q6UW60 755 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 APOBEC3DQ96AK3 386 aaPredicted RBP7.5□□□□□ -1.21
SYNE2-217ENST00000555022 GPR35Q9HC97 309 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 OCIAD1Q9NX40 245 aa7.5□□□□□ -1.21
SYNE2-217ENST00000555022 C17orf98A8MV24 154 aa7.49□□□□□ -1.21
SYNE2-217ENST00000555022 PI4KAP42356 2102 aa7.49□□□□□ -1.21
SYNE2-217ENST00000555022 GPR6P46095 362 aaPredicted RBP7.49□□□□□ -1.21
SYNE2-217ENST00000555022 HIST3H3Q16695 136 aa7.49□□□□□ -1.21
SYNE2-217ENST00000555022 ZNF826PQ6ZT77 177 aa7.49□□□□□ -1.21
SYNE2-217ENST00000555022 CISD2Q8N5K1 135 aaKnown RBP7.49□□□□□ -1.21
SYNE2-217ENST00000555022 OR8G5Q8NG78 346 aa7.49□□□□□ -1.21
SYNE2-217ENST00000555022 OR10P1Q8NGE3 313 aa7.49□□□□□ -1.21
SYNE2-217ENST00000555022 SFRP2Q96HF1 295 aa7.49□□□□□ -1.21
SYNE2-217ENST00000555022 NAA38Q9BRA0 125 aaKnown RBP7.49□□□□□ -1.21
SYNE2-217ENST00000555022 CLCF1Q9UBD9 225 aa7.49□□□□□ -1.21
SYNE2-217ENST00000555022 CHCHD2Q9Y6H1 151 aaPredicted RBP7.49□□□□□ -1.21
SYNE2-217ENST00000555022 MUC3AQ02505 3323 aa7.49□□□□□ -1.21
SYNE2-217ENST00000555022 TRAV24A0A0B4J272 114 aa7.49□□□□□ -1.21
SYNE2-217ENST00000555022 KIR2DS1A0A191URI9 304 aa7.49□□□□□ -1.21
SYNE2-217ENST00000555022 SH2D7A6NKC9 451 aaPredicted RBP7.49□□□□□ -1.21
SYNE2-217ENST00000555022 PRSS47A8MTI9 375 aa7.49□□□□□ -1.21
SYNE2-217ENST00000555022 FOXH1O75593 365 aa7.49□□□□□ -1.21
SYNE2-217ENST00000555022 IGLV3-1P01715 115 aa7.49□□□□□ -1.21
SYNE2-217ENST00000555022 COX5AP20674 150 aa7.49□□□□□ -1.21
SYNE2-217ENST00000555022 GATA2P23769 480 aaPredicted RBP7.49□□□□□ -1.21
SYNE2-217ENST00000555022 KIR2DS4P43632 304 aa7.49□□□□□ -1.21
SYNE2-217ENST00000555022 KIR2DS1Q14954 304 aa7.49□□□□□ -1.21
SYNE2-217ENST00000555022 COL5A1-AS1Q5SY13 56 aa7.49□□□□□ -1.21
SYNE2-217ENST00000555022 FAM27BQ5VT28 67 aa7.49□□□□□ -1.21
SYNE2-217ENST00000555022 PRR27Q6MZM9 219 aa7.49□□□□□ -1.21
SYNE2-217ENST00000555022 SLC25A45Q8N413 288 aa7.49□□□□□ -1.21
SYNE2-217ENST00000555022 DRAM1Q8N682 238 aa7.49□□□□□ -1.21
SYNE2-217ENST00000555022 STPG3Q8N7X2 389 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms