RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 FOXC2Q99958 501 aa14.43□□□□□ -0.1
SHOX-204ENST00000554971 SAP30LQ9HAJ7 183 aa14.43□□□□□ -0.1
SHOX-204ENST00000554971 IL19Q9UHD0 177 aa14.43□□□□□ -0.1
SHOX-204ENST00000554971 RNF212BA8MTL3 300 aa14.42□□□□□ -0.1
SHOX-204ENST00000554971 AGPAT2O15120 278 aa14.42□□□□□ -0.1
SHOX-204ENST00000554971 SSSCA1O60232 199 aa14.42□□□□□ -0.1
SHOX-204ENST00000554971 OR2H2O95918 312 aa14.42□□□□□ -0.1
SHOX-204ENST00000554971 RPL23AP62750 156 aaKnown RBP14.42□□□□□ -0.1
SHOX-204ENST00000554971 TNFAIP6P98066 277 aaPredicted RBP14.42□□□□□ -0.1
SHOX-204ENST00000554971 TMEM88Q6PEY1 159 aa14.42□□□□□ -0.1
SHOX-204ENST00000554971 CLEC9AQ6UXN8 241 aa14.42□□□□□ -0.1
SHOX-204ENST00000554971 ITLN1Q8WWA0 313 aa14.42□□□□□ -0.1
SHOX-204ENST00000554971 NEU4Q8WWR8 484 aaPredicted RBP14.42□□□□□ -0.1
SHOX-204ENST00000554971 DIRC2Q96SL1 478 aa14.42□□□□□ -0.1
SHOX-204ENST00000554971 TUBA4BQ9H853 241 aa14.42□□□□□ -0.1
SHOX-204ENST00000554971 PRELID1Q9Y255 219 aa14.42□□□□□ -0.1
SHOX-204ENST00000554971 YLPM1P49750 1951 aaKnown RBP14.42□□□□□ -0.1
SHOX-204ENST00000554971 COL8A2P25067 703 aa14.41□□□□□ -0.1
SHOX-204ENST00000554971 MSMO1Q15800 293 aa14.41□□□□□ -0.1
SHOX-204ENST00000554971 OR2G3Q8NGZ4 309 aa14.41□□□□□ -0.1
SHOX-204ENST00000554971 MEGF10Q96KG7 1140 aa14.41□□□□□ -0.1
SHOX-204ENST00000554971 HES4Q9HCC6 221 aa14.41□□□□□ -0.1
SHOX-204ENST00000554971 LIN7CQ9NUP9 197 aaKnown RBP14.41□□□□□ -0.1
SHOX-204ENST00000554971 DCAF16Q9NXF7 216 aa14.41□□□□□ -0.1
SHOX-204ENST00000554971 MLXQ9UH92 298 aa14.41□□□□□ -0.1
SHOX-204ENST00000554971 TRAPPC2LQ9UL33 140 aa14.41□□□□□ -0.1
SHOX-204ENST00000554971 WSB1Q9Y6I7 421 aa14.41□□□□□ -0.1
SHOX-204ENST00000554971 CR1P17927 2039 aa14.41□□□□□ -0.1
SHOX-204ENST00000554971 ABCA1O95477 2261 aa14.41□□□□□ -0.1
SHOX-204ENST00000554971 CHST1O43916 411 aa14.41□□□□□ -0.1
SHOX-204ENST00000554971 NXPH2O95156 264 aa14.41□□□□□ -0.1
SHOX-204ENST00000554971 PTBP3O95758 552 aaKnown RBP14.41□□□□□ -0.1
SHOX-204ENST00000554971 DAOP14920 347 aa14.41□□□□□ -0.1
SHOX-204ENST00000554971 Q5PR19 223 aa14.41□□□□□ -0.1
SHOX-204ENST00000554971 STX12Q86Y82 276 aa14.41□□□□□ -0.1
SHOX-204ENST00000554971 CBLN2Q8IUK8 224 aa14.41□□□□□ -0.1
SHOX-204ENST00000554971 C15orf54Q8N8G6 183 aa14.41□□□□□ -0.1
SHOX-204ENST00000554971 SLC35B3Q9H1N7 401 aa14.41□□□□□ -0.1
SHOX-204ENST00000554971 UNKLQ9H9P5 680 aaKnown RBP14.41□□□□□ -0.1
SHOX-204ENST00000554971 GCM1Q9NP62 436 aa14.41□□□□□ -0.1
SHOX-204ENST00000554971 C9JQL5 133 aa14.4□□□□□ -0.1
SHOX-204ENST00000554971 FOLR2P14207 255 aa14.4□□□□□ -0.1
SHOX-204ENST00000554971 ATP6V0CP27449 155 aa14.4□□□□□ -0.1
SHOX-204ENST00000554971 TAS2R30P59541 319 aa14.4□□□□□ -0.1
SHOX-204ENST00000554971 ZNF154Q13106 437 aa14.4□□□□□ -0.1
SHOX-204ENST00000554971 TESK1Q15569 626 aa14.4□□□□□ -0.1
SHOX-204ENST00000554971 OR5C1Q8NGR4 320 aa14.4□□□□□ -0.1
SHOX-204ENST00000554971 OR10Z1Q8NGY1 313 aa14.4□□□□□ -0.1
SHOX-204ENST00000554971 GPR146Q96CH1 333 aa14.4□□□□□ -0.1
SHOX-204ENST00000554971 ATP5SQ99766 215 aa14.4□□□□□ -0.1
SHOX-204ENST00000554971 EIF5A2Q9GZV4 153 aaKnown RBP14.4□□□□□ -0.1
SHOX-204ENST00000554971 TOLLIPQ9H0E2 274 aa14.4□□□□□ -0.1
SHOX-204ENST00000554971 SH3BGRL3Q9H299 93 aa14.4□□□□□ -0.1
SHOX-204ENST00000554971 KCNIP1Q9NZI2 227 aa14.4□□□□□ -0.1
SHOX-204ENST00000554971 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.4□□□□□ -0.1
SHOX-204ENST00000554971 NDUFA2O43678 99 aa14.39□□□□□ -0.11
SHOX-204ENST00000554971 RAB2AP61019 212 aa14.39□□□□□ -0.11
SHOX-204ENST00000554971 HOXA4Q00056 320 aaPredicted RBP14.39□□□□□ -0.11
SHOX-204ENST00000554971 PRAMEF6Q5VXH4 476 aa14.39□□□□□ -0.11
SHOX-204ENST00000554971 WFDC11Q8NEX6 87 aa14.39□□□□□ -0.11
SHOX-204ENST00000554971 DOCK11Q5JSL3 2073 aa14.39□□□□□ -0.11
SHOX-204ENST00000554971 FAM90A26D6RGX4 464 aa14.39□□□□□ -0.11
SHOX-204ENST00000554971 GATA4P43694 442 aa14.39□□□□□ -0.11
SHOX-204ENST00000554971 SULT1A1P50225 295 aa14.39□□□□□ -0.11
SHOX-204ENST00000554971 PPT1P50897 306 aa14.39□□□□□ -0.11
SHOX-204ENST00000554971 MZT1Q08AG7 82 aa14.39□□□□□ -0.11
SHOX-204ENST00000554971 CLINT1Q14677 625 aa14.39□□□□□ -0.11
SHOX-204ENST00000554971 SLC35E4Q6ICL7 350 aa14.39□□□□□ -0.11
SHOX-204ENST00000554971 TMEM182Q6ZP80 229 aaPredicted RBP14.39□□□□□ -0.11
SHOX-204ENST00000554971 FAM213BQ8TBF2 198 aa14.39□□□□□ -0.11
SHOX-204ENST00000554971 EGLN1Q9GZT9 426 aa14.39□□□□□ -0.11
SHOX-204ENST00000554971 MAGT1Q9H0U3 335 aa14.39□□□□□ -0.11
SHOX-204ENST00000554971 COA4Q9NYJ1 87 aa14.39□□□□□ -0.11
SHOX-204ENST00000554971 ZFHX3Q15911 3703 aa14.38□□□□□ -0.11
SHOX-204ENST00000554971 IGHV1-69-2A0A0G2JMI3 117 aa14.38□□□□□ -0.11
SHOX-204ENST00000554971 TMEM30CPA0ZSE6 113 aa14.38□□□□□ -0.11
SHOX-204ENST00000554971 KIAA1324LA8MWY0 1029 aaPredicted RBP14.38□□□□□ -0.11
SHOX-204ENST00000554971 CDIPTO14735 213 aa14.38□□□□□ -0.11
SHOX-204ENST00000554971 TXNL1O43396 289 aa14.38□□□□□ -0.11
SHOX-204ENST00000554971 TMEM50AO95807 157 aa14.38□□□□□ -0.11
SHOX-204ENST00000554971 HBE1P02100 147 aa14.38□□□□□ -0.11
SHOX-204ENST00000554971 TNFSF4P23510 183 aa14.38□□□□□ -0.11
SHOX-204ENST00000554971 DYNLT3P51808 116 aa14.38□□□□□ -0.11
SHOX-204ENST00000554971 PAX9P55771 341 aa14.38□□□□□ -0.11
SHOX-204ENST00000554971 AVPI1Q5T686 147 aa14.38□□□□□ -0.11
SHOX-204ENST00000554971 C5orf24Q7Z6I8 188 aa14.38□□□□□ -0.11
SHOX-204ENST00000554971 C11orf53Q8IXP5 236 aa14.38□□□□□ -0.11
SHOX-204ENST00000554971 TCTEX1D1Q8N7M0 179 aa14.38□□□□□ -0.11
SHOX-204ENST00000554971 IL1F10Q8WWZ1 152 aa14.38□□□□□ -0.11
SHOX-204ENST00000554971 WNK2Q9Y3S1 2297 aa14.38□□□□□ -0.11
SHOX-204ENST00000554971 SIRPB1O00241 398 aa14.37□□□□□ -0.11
SHOX-204ENST00000554971 HAND1O96004 215 aa14.37□□□□□ -0.11
SHOX-204ENST00000554971 IGLV2-14P01704 120 aa14.37□□□□□ -0.11
SHOX-204ENST00000554971 PSG2P11465 335 aa14.37□□□□□ -0.11
SHOX-204ENST00000554971 MRPS11P82912 194 aaKnown RBP14.37□□□□□ -0.11
SHOX-204ENST00000554971 RHEBQ15382 184 aa14.37□□□□□ -0.11
SHOX-204ENST00000554971 RNF212Q495C1 297 aa14.37□□□□□ -0.11
SHOX-204ENST00000554971 PRSS57Q6UWY2 283 aa14.37□□□□□ -0.11
SHOX-204ENST00000554971 ODF3L1Q8IXM7 274 aa14.37□□□□□ -0.11
SHOX-204ENST00000554971 PARP12Q9H0J9 701 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms