RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	NUFIP1	Q9UHK0	495 aa	Known RBP	3.88	□□□□□ -1.79
PSMC6-208	ENST00000554956	MRM2	Q9UI43	246 aa	Known RBP	3.88	□□□□□ -1.79
PSMC6-208	ENST00000554956	HILPDA	Q9Y5L2	63 aa		3.88	□□□□□ -1.79
PSMC6-208	ENST00000554956	PLXNB1	O43157	2135 aa		3.88	□□□□□ -1.79
PSMC6-208	ENST00000554956	IGKV1-9	A0A0C4DH69	117 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	ARRDC5	A6NEK1	342 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	OR5B21	A6NL26	309 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	EI24	O14681	340 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	DHRS3	O75911	302 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	CST1	P01037	141 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	HMGN1	P05114	100 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	ZNF735	P0CB33	412 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	ZNF728	P0DKX0	622 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	IGHV1-8	P0DP01	117 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	NPBWR2	P48146	333 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	DAP	P51397	102 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	EDDM3B	P56851	147 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	EMX1	Q04741	257 aa	Predicted RBP	3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	FGL1	Q08830	312 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	DYNC1I2	Q13409	638 aa	Known RBP	3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	ZNF146	Q15072	292 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	SNCB	Q16143	134 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	ECSCR	Q19T08	205 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	SMIM21	Q3B7S5	101 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	VAX1	Q5SQQ9	334 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	MUC21	Q5SSG8	566 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	CLVS2	Q5SYC1	327 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	ZNF684	Q5T5D7	378 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	ATRAID	Q6UW56	229 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956		Q6ZSR3	168 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	CCDC121	Q6ZUS5	278 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	RDH10	Q8IZV5	341 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	FTMT	Q8N4E7	242 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	ASCC1	Q8N9N2	400 aa	Known RBP	3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	OR4F17	Q8NGA8	305 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	OR4S1	Q8NGB4	309 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	OR4P4	Q8NGL7	312 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	OR1B1	Q8NGR6	318 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	RPS4Y2	Q8TD47	263 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	MYDGF	Q969H8	173 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	CCDC124	Q96CT7	223 aa	Known RBP	3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	RBMXL1	Q96E39	390 aa	Known RBP	3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	MALSU1	Q96EH3	234 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	RCHY1	Q96PM5	261 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	OR4F4	Q96R69	305 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	CHST6	Q9GZX3	395 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	RAB18	Q9NP72	206 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	MED4	Q9NPJ6	270 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	INPP5E	Q9NRR6	644 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	TVP23B	Q9NYZ1	205 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	ENPP5	Q9UJA9	477 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	SPATA2	Q9UM82	520 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	GSTK1	Q9Y2Q3	226 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	ARL2BP	Q9Y2Y0	163 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956		V9GYS6	101 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	DNAH9	Q9NYC9	4486 aa		3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	TET2	Q6N021	2002 aa	Predicted RBP	3.87	□□□□□ -1.79
PSMC6-208	ENST00000554956	IGLV4-3	A0A075B6K6	122 aa		3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	TRAV26-1	A0A087WT03	109 aa		3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	IGHV2-26	A0A0B4J1V2	119 aa		3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	IGKV1-12	A0A0C4DH73	117 aa		3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	FBLL1	A6NHQ2	334 aa	Known RBP	3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	LOC110117498-PIK3R3	F6TDL0	507 aa		3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956		K7EQG2	157 aa		3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	DLGAP1	O14490	977 aa		3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	CASQ2	O14958	399 aa	Predicted RBP	3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	RPP14	O95059	124 aa	Known RBP	3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	IGKV1D-12	P01611	117 aa		3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	FOLR2	P14207	255 aa		3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	CCL1	P22362	96 aa		3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	POLR2I	P36954	125 aa	Known RBP	3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	VDAC2	P45880	294 aa	Predicted RBP	3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	DYNLT3	P51808	116 aa		3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	CRISP1	P54107	249 aa		3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	CXCR4	P61073	352 aa		3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	ESRRG	P62508	458 aa		3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	ACTA2	P62736	377 aa		3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	RPS27A	P62979	156 aa	Known RBP	3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	GNGT1	P63211	74 aa		3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	ACTG2	P63267	376 aa		3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	ACTC1	P68032	377 aa		3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	ACTA1	P68133	377 aa		3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	EDDM3A	Q14507	147 aa		3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	HSP90B2P	Q58FF3	399 aa		3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	PRAMEF5	Q5TYX0	476 aa		3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	AADACL4	Q5VUY2	407 aa		3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	DEGS2	Q6QHC5	323 aa		3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	ZNF322	Q6U7Q0	402 aa	Predicted RBP	3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	SLC25A26	Q70HW3	274 aa		3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	SLC25A42	Q86VD7	318 aa		3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	SLC38A6	Q8IZM9	456 aa		3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	LINC00612	Q8N6U2	182 aa		3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	OR13D1	Q8NGV5	346 aa		3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	DLX4	Q92988	240 aa	Predicted RBP	3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	CHCHD5	Q9BSY4	110 aa		3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	MRO	Q9BYG7	248 aa		3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	OCR1	Q9BZK8	76 aa		3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	PKIB	Q9C010	78 aa		3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	ADGRL4	Q9HBW9	690 aa		3.86	□□□□□ -1.79
PSMC6-208	ENST00000554956	ABCB10	Q9NRK6	738 aa		3.86	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms