RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 PVALBP20472 110 aaPredicted RBP0.86□□□□□ -2.27
SCFD1-214ENST00000554819 RBM11P57052 281 aaKnown RBP0.86□□□□□ -2.27
SCFD1-214ENST00000554819 HERVK_113P63121 156 aa0.86□□□□□ -2.27
SCFD1-214ENST00000554819 NNATQ16517 81 aa0.86□□□□□ -2.27
SCFD1-214ENST00000554819 TLCD1Q96CP7 247 aa0.86□□□□□ -2.27
SCFD1-214ENST00000554819 CPNE2Q96FN4 548 aaPredicted RBP0.86□□□□□ -2.27
SCFD1-214ENST00000554819 TMEM208Q9BTX3 173 aa0.86□□□□□ -2.27
SCFD1-214ENST00000554819 DOHHQ9BU89 302 aa0.86□□□□□ -2.27
SCFD1-214ENST00000554819 ASCL3Q9NQ33 180 aa0.86□□□□□ -2.27
SCFD1-214ENST00000554819 TAAR3PQ9P1P4 343 aa0.86□□□□□ -2.27
SCFD1-214ENST00000554819 SCN9AQ15858 1988 aa0.86□□□□□ -2.27
SCFD1-214ENST00000554819 WDR90Q96KV7 1748 aa0.86□□□□□ -2.27
SCFD1-214ENST00000554819 DSCAMO60469 2012 aa0.86□□□□□ -2.27
SCFD1-214ENST00000554819 FREM1Q5H8C1 2179 aa0.86□□□□□ -2.27
SCFD1-214ENST00000554819 GOLGA8QA0A0J9YX86 632 aa0.85□□□□□ -2.27
SCFD1-214ENST00000554819 MRASO14807 208 aa0.85□□□□□ -2.27
SCFD1-214ENST00000554819 GP1BAP07359 652 aa0.85□□□□□ -2.27
SCFD1-214ENST00000554819 CCR7P32248 378 aa0.85□□□□□ -2.27
SCFD1-214ENST00000554819 CD79BP40259 229 aa0.85□□□□□ -2.27
SCFD1-214ENST00000554819 RPL27AP46776 148 aaKnown RBP0.85□□□□□ -2.27
SCFD1-214ENST00000554819 TMEM155Q4W5P6 130 aa0.85□□□□□ -2.27
SCFD1-214ENST00000554819 ATP5L2Q7Z4Y8 100 aa0.85□□□□□ -2.27
SCFD1-214ENST00000554819 OR52E4Q8NGH9 312 aa0.85□□□□□ -2.27
SCFD1-214ENST00000554819 MS4A6EQ96DS6 147 aa0.85□□□□□ -2.27
SCFD1-214ENST00000554819 Q96M85 177 aa0.85□□□□□ -2.27
SCFD1-214ENST00000554819 TMEM222Q9H0R3 208 aa0.85□□□□□ -2.27
SCFD1-214ENST00000554819 CST9LQ9H4G1 147 aa0.85□□□□□ -2.27
SCFD1-214ENST00000554819 REREQ9P2R6 1566 aa0.85□□□□□ -2.27
SCFD1-214ENST00000554819 TRAV8-1A0A0A6YYK1 113 aa0.84□□□□□ -2.27
SCFD1-214ENST00000554819 ZNF737O75373 536 aa0.84□□□□□ -2.27
SCFD1-214ENST00000554819 H2BFSP57053 126 aa0.84□□□□□ -2.27
SCFD1-214ENST00000554819 MESTQ5EB52 335 aa0.84□□□□□ -2.27
SCFD1-214ENST00000554819 SPATA31B1PQ5VZV4 182 aa0.84□□□□□ -2.27
SCFD1-214ENST00000554819 LYZL1Q6UWQ5 148 aa0.84□□□□□ -2.27
SCFD1-214ENST00000554819 KTN1-AS1Q86SY8 53 aa0.84□□□□□ -2.27
SCFD1-214ENST00000554819 RPS19BP1Q86WX3 136 aaKnown RBP0.84□□□□□ -2.27
SCFD1-214ENST00000554819 ATP6V1C2Q8NEY4 427 aa0.84□□□□□ -2.27
SCFD1-214ENST00000554819 OR5AK3PQ8NH89 298 aa0.84□□□□□ -2.27
SCFD1-214ENST00000554819 RNASEH2CQ8TDP1 164 aaKnown RBP0.84□□□□□ -2.27
SCFD1-214ENST00000554819 CYGBQ8WWM9 190 aa0.84□□□□□ -2.27
SCFD1-214ENST00000554819 SLC7A6Q92536 515 aa0.84□□□□□ -2.27
SCFD1-214ENST00000554819 AGPAT3Q9NRZ7 376 aa0.84□□□□□ -2.27
SCFD1-214ENST00000554819 EMC3Q9P0I2 261 aa0.84□□□□□ -2.27
SCFD1-214ENST00000554819 KLK5Q9Y337 293 aaPredicted RBP0.84□□□□□ -2.27
SCFD1-214ENST00000554819 THSD7AQ9UPZ6 1657 aa0.84□□□□□ -2.28
SCFD1-214ENST00000554819 KLRC4O43908 158 aa0.83□□□□□ -2.28
SCFD1-214ENST00000554819 MRPS14O60783 128 aaKnown RBP0.83□□□□□ -2.28
SCFD1-214ENST00000554819 F8A1P23610 371 aa0.83□□□□□ -2.28
SCFD1-214ENST00000554819 IFNGR2P38484 337 aa0.83□□□□□ -2.28
SCFD1-214ENST00000554819 GABRA2P47869 451 aa0.83□□□□□ -2.28
SCFD1-214ENST00000554819 EMP1P54849 157 aa0.83□□□□□ -2.28
SCFD1-214ENST00000554819 TMEM267Q0VDI3 215 aaPredicted RBP0.83□□□□□ -2.28
SCFD1-214ENST00000554819 USF2Q15853 346 aaPredicted RBP0.83□□□□□ -2.28
SCFD1-214ENST00000554819 LCN8Q6JVE9 175 aa0.83□□□□□ -2.28
SCFD1-214ENST00000554819 SPATA12Q7Z6I5 190 aa0.83□□□□□ -2.28
SCFD1-214ENST00000554819 BAP18Q8IXM2 172 aa0.83□□□□□ -2.28
SCFD1-214ENST00000554819 LRRC34Q8IZ02 419 aa0.83□□□□□ -2.28
SCFD1-214ENST00000554819 DAND5Q8N907 189 aa0.83□□□□□ -2.28
SCFD1-214ENST00000554819 STOML3Q8TAV4 291 aa0.83□□□□□ -2.28
SCFD1-214ENST00000554819 METTL9Q9H1A3 318 aa0.83□□□□□ -2.28
SCFD1-214ENST00000554819 VCX3BQ9H321 246 aa0.83□□□□□ -2.28
SCFD1-214ENST00000554819 MED9Q9NWA0 146 aa0.83□□□□□ -2.28
SCFD1-214ENST00000554819 BAZ2BQ9UIF8 2168 aaKnown RBP0.83□□□□□ -2.28
SCFD1-214ENST00000554819 DIDO1Q9BTC0 2240 aaKnown RBP0.83□□□□□ -2.28
SCFD1-214ENST00000554819 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
SCFD1-214ENST00000554819 DAPL1A0PJW8 107 aa0.82□□□□□ -2.28
SCFD1-214ENST00000554819 CRPP02741 224 aa0.82□□□□□ -2.28
SCFD1-214ENST00000554819 SERPINA7P05543 415 aa0.82□□□□□ -2.28
SCFD1-214ENST00000554819 TPM1P09493 284 aa0.82□□□□□ -2.28
SCFD1-214ENST00000554819 ALDH3A1P30838 453 aa0.82□□□□□ -2.28
SCFD1-214ENST00000554819 SNAP25P60880 206 aa0.82□□□□□ -2.28
SCFD1-214ENST00000554819 PRB3Q04118 309 aaPredicted RBP0.82□□□□□ -2.28
SCFD1-214ENST00000554819 PLCXD2Q0VAA5 305 aa0.82□□□□□ -2.28
SCFD1-214ENST00000554819 COPS6Q7L5N1 327 aa0.82□□□□□ -2.28
SCFD1-214ENST00000554819 C17orf78Q8N4C9 275 aa0.82□□□□□ -2.28
SCFD1-214ENST00000554819 OR51T1Q8NGJ9 327 aa0.82□□□□□ -2.28
SCFD1-214ENST00000554819 Q8WTZ3 238 aa0.82□□□□□ -2.28
SCFD1-214ENST00000554819 MBD3L1Q8WWY6 194 aa0.82□□□□□ -2.28
SCFD1-214ENST00000554819 HMSDA8MTL9 139 aa0.81□□□□□ -2.28
SCFD1-214ENST00000554819 ZNF879B4DU55 563 aa0.81□□□□□ -2.28
SCFD1-214ENST00000554819 GOLGA8RI6L899 631 aa0.81□□□□□ -2.28
SCFD1-214ENST00000554819 SYT1P21579 422 aa0.81□□□□□ -2.28
SCFD1-214ENST00000554819 PSMB8P28062 276 aa0.81□□□□□ -2.28
SCFD1-214ENST00000554819 CDK9P50750 372 aaKnown RBP0.81□□□□□ -2.28
SCFD1-214ENST00000554819 TBPL1P62380 186 aa0.81□□□□□ -2.28
SCFD1-214ENST00000554819 HOXC5Q00444 222 aa0.81□□□□□ -2.28
SCFD1-214ENST00000554819 LGALS9BQ3B8N2 356 aa0.81□□□□□ -2.28
SCFD1-214ENST00000554819 SLC36A2Q495M3 483 aa0.81□□□□□ -2.28
SCFD1-214ENST00000554819 FP248Q71RG6 208 aaPredicted RBP0.81□□□□□ -2.28
SCFD1-214ENST00000554819 C1orf174Q8IYL3 243 aa0.81□□□□□ -2.28
SCFD1-214ENST00000554819 OR1L8Q8NGR8 309 aa0.81□□□□□ -2.28
SCFD1-214ENST00000554819 OR13C8Q8NGS7 320 aa0.81□□□□□ -2.28
SCFD1-214ENST00000554819 PARVAQ9NVD7 372 aa0.81□□□□□ -2.28
SCFD1-214ENST00000554819 POLR3HQ9Y535 204 aaPredicted RBP0.81□□□□□ -2.28
SCFD1-214ENST00000554819 TIMM9Q9Y5J7 89 aa0.81□□□□□ -2.28
SCFD1-214ENST00000554819 DICER1Q9UPY3 1922 aaKnown RBP0.8□□□□□ -2.28
SCFD1-214ENST00000554819 A0A087WUU8 490 aa0.8□□□□□ -2.28
SCFD1-214ENST00000554819 IGKV2D-26A0A0A0MRZ7 120 aa0.8□□□□□ -2.28
SCFD1-214ENST00000554819 M0R381 172 aa0.8□□□□□ -2.28
SCFD1-214ENST00000554819 CIAO1O76071 339 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms