RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 OR2V2Q96R30 315 aa9.8□□□□□ -0.84
SHMT2-212ENST00000554467 RNF150Q9ULK6 438 aa9.8□□□□□ -0.84
SHMT2-212ENST00000554467 PPP1R3CQ9UQK1 317 aa9.8□□□□□ -0.84
SHMT2-212ENST00000554467 CBY1Q9Y3M2 126 aa9.8□□□□□ -0.84
SHMT2-212ENST00000554467 TMEM210A6NLX4 147 aa9.8□□□□□ -0.84
SHMT2-212ENST00000554467 CD81P60033 236 aa9.8□□□□□ -0.84
SHMT2-212ENST00000554467 MBNL2Q5VZF2 373 aaKnown RBP9.8□□□□□ -0.84
SHMT2-212ENST00000554467 ACP7Q6ZNF0 438 aa9.8□□□□□ -0.84
SHMT2-212ENST00000554467 TMEM182Q6ZP80 229 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-212ENST00000554467 MOGAT3Q86VF5 341 aa9.8□□□□□ -0.84
SHMT2-212ENST00000554467 TGIF2LYQ8IUE0 185 aa9.8□□□□□ -0.84
SHMT2-212ENST00000554467 BEND2Q8NDZ0 799 aa9.8□□□□□ -0.84
SHMT2-212ENST00000554467 FAM213BQ8TBF2 198 aa9.8□□□□□ -0.84
SHMT2-212ENST00000554467 MRGPRDQ8TDS7 321 aa9.8□□□□□ -0.84
SHMT2-212ENST00000554467 KCNS2Q9ULS6 477 aa9.8□□□□□ -0.84
SHMT2-212ENST00000554467 ELOA3CA0A087WX78 387 aaPredicted RBP9.79□□□□□ -0.84
SHMT2-212ENST00000554467 DEDDO75618 318 aa9.79□□□□□ -0.84
SHMT2-212ENST00000554467 ZNF16P17020 682 aaPredicted RBP9.79□□□□□ -0.84
SHMT2-212ENST00000554467 GABRA2P47869 451 aa9.79□□□□□ -0.84
SHMT2-212ENST00000554467 COL10A1Q03692 680 aa9.79□□□□□ -0.84
SHMT2-212ENST00000554467 HNF4GQ14541 408 aa9.79□□□□□ -0.84
SHMT2-212ENST00000554467 JOSD1Q15040 202 aaPredicted RBP9.79□□□□□ -0.84
SHMT2-212ENST00000554467 BOD1Q96IK1 185 aa9.79□□□□□ -0.84
SHMT2-212ENST00000554467 TAAR3PQ9P1P4 343 aa9.79□□□□□ -0.84
SHMT2-212ENST00000554467 NKX2-6A6NCS4 301 aa9.79□□□□□ -0.84
SHMT2-212ENST00000554467 H3BQ15 152 aa9.79□□□□□ -0.84
SHMT2-212ENST00000554467 TUSC2O75896 110 aa9.79□□□□□ -0.84
SHMT2-212ENST00000554467 IGHV3-13P01766 116 aa9.79□□□□□ -0.84
SHMT2-212ENST00000554467 IGHV3-7P01780 117 aa9.79□□□□□ -0.84
SHMT2-212ENST00000554467 EPHA1P21709 976 aa9.79□□□□□ -0.84
SHMT2-212ENST00000554467 OR3A1P47881 315 aa9.79□□□□□ -0.84
SHMT2-212ENST00000554467 GLIPR1P48060 266 aa9.79□□□□□ -0.84
SHMT2-212ENST00000554467 KLF3P57682 345 aaPredicted RBP9.79□□□□□ -0.84
SHMT2-212ENST00000554467 NKX6-1P78426 367 aaPredicted RBP9.79□□□□□ -0.84
SHMT2-212ENST00000554467 Q6ZS49 121 aa9.79□□□□□ -0.84
SHMT2-212ENST00000554467 CCDC71LQ8N9Z2 235 aa9.79□□□□□ -0.84
SHMT2-212ENST00000554467 TMEM171Q8WVE6 324 aa9.79□□□□□ -0.84
SHMT2-212ENST00000554467 ARV1Q9H2C2 271 aa9.79□□□□□ -0.84
SHMT2-212ENST00000554467 RIMS4Q9H426 269 aaPredicted RBP9.79□□□□□ -0.84
SHMT2-212ENST00000554467 C19orf12Q9NSK7 152 aa9.79□□□□□ -0.84
SHMT2-212ENST00000554467 IGHV3-43A0A0B4J1X8 118 aa9.79□□□□□ -0.84
SHMT2-212ENST00000554467 JTBO76095 146 aa9.79□□□□□ -0.84
SHMT2-212ENST00000554467 IGHV3-43DP0DP04 118 aa9.79□□□□□ -0.84
SHMT2-212ENST00000554467 UCP3P55916 312 aa9.79□□□□□ -0.84
SHMT2-212ENST00000554467 PKD1L2Q7Z442 2459 aa9.78□□□□□ -0.84
SHMT2-212ENST00000554467 DEFB108AA8MXU0 73 aa9.78□□□□□ -0.84
SHMT2-212ENST00000554467 CST7O76096 145 aa9.78□□□□□ -0.84
SHMT2-212ENST00000554467 GAPDHP04406 335 aaKnown RBP9.78□□□□□ -0.84
SHMT2-212ENST00000554467 GNMTQ14749 295 aa9.78□□□□□ -0.84
SHMT2-212ENST00000554467 TESK1Q15569 626 aa9.78□□□□□ -0.84
SHMT2-212ENST00000554467 CD177Q8N6Q3 437 aa9.78□□□□□ -0.84
SHMT2-212ENST00000554467 OR52L2PQ8NGH6 319 aa9.78□□□□□ -0.84
SHMT2-212ENST00000554467 ITLN1Q8WWA0 313 aa9.78□□□□□ -0.84
SHMT2-212ENST00000554467 C18orf12Q96KH6 178 aa9.78□□□□□ -0.84
SHMT2-212ENST00000554467 HES4Q9HCC6 221 aa9.78□□□□□ -0.84
SHMT2-212ENST00000554467 OR2W1Q9Y3N9 320 aa9.78□□□□□ -0.84
SHMT2-212ENST00000554467 FAM24AA6NFZ4 105 aa9.78□□□□□ -0.84
SHMT2-212ENST00000554467 H3BP45 60 aa9.78□□□□□ -0.84
SHMT2-212ENST00000554467 CD40P25942 277 aa9.78□□□□□ -0.84
SHMT2-212ENST00000554467 SSTR5P35346 364 aa9.78□□□□□ -0.84
SHMT2-212ENST00000554467 TAGLN2P37802 199 aaKnown RBP9.78□□□□□ -0.84
SHMT2-212ENST00000554467 SOHLH1Q5JUK2 328 aa9.78□□□□□ -0.84
SHMT2-212ENST00000554467 ZNF880Q6PDB4 577 aa9.78□□□□□ -0.84
SHMT2-212ENST00000554467 ZNF695Q8IW36 515 aa9.78□□□□□ -0.84
SHMT2-212ENST00000554467 LGI3Q8N145 548 aa9.78□□□□□ -0.84
SHMT2-212ENST00000554467 DEFB108BQ8NET1 73 aa9.78□□□□□ -0.84
SHMT2-212ENST00000554467 COQ2Q96H96 371 aa9.78□□□□□ -0.84
SHMT2-212ENST00000554467 NOL4LQ96MY1 436 aaPredicted RBP9.78□□□□□ -0.84
SHMT2-212ENST00000554467 TMEM208Q9BTX3 173 aa9.78□□□□□ -0.84
SHMT2-212ENST00000554467 TMEM222Q9H0R3 208 aa9.78□□□□□ -0.84
SHMT2-212ENST00000554467 BORCS7-ASMTA0A0B4J1R7 106 aa9.78□□□□□ -0.84
SHMT2-212ENST00000554467 TRGV8A0A0C4DH27 118 aa9.78□□□□□ -0.84
SHMT2-212ENST00000554467 A6NNC1 897 aa9.78□□□□□ -0.84
SHMT2-212ENST00000554467 SSSCA1O60232 199 aa9.78□□□□□ -0.84
SHMT2-212ENST00000554467 DLK1P80370 383 aa9.78□□□□□ -0.84
SHMT2-212ENST00000554467 H1FOOQ8IZA3 346 aaPredicted RBP9.78□□□□□ -0.84
SHMT2-212ENST00000554467 OR10V1Q8NGI7 309 aa9.78□□□□□ -0.84
SHMT2-212ENST00000554467 SNX22Q96L94 193 aa9.78□□□□□ -0.84
SHMT2-212ENST00000554467 FAM212BQ9NTI7 297 aaPredicted RBP9.78□□□□□ -0.84
SHMT2-212ENST00000554467 C12orf77C9JDV5 145 aa9.77□□□□□ -0.85
SHMT2-212ENST00000554467 ADAM20O43506 726 aa9.77□□□□□ -0.85
SHMT2-212ENST00000554467 PGLYRP1O75594 196 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-212ENST00000554467 MDKP21741 143 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-212ENST00000554467 COMMD1Q8N668 190 aa9.77□□□□□ -0.85
SHMT2-212ENST00000554467 ZNRF1Q8ND25 227 aa9.77□□□□□ -0.85
SHMT2-212ENST00000554467 ABHD14AQ9BUJ0 271 aa9.77□□□□□ -0.85
SHMT2-212ENST00000554467 HRNRQ86YZ3 2850 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-212ENST00000554467 DSCAMO60469 2012 aa9.77□□□□□ -0.85
SHMT2-212ENST00000554467 SMCO3A2RU48 225 aa9.77□□□□□ -0.85
SHMT2-212ENST00000554467 C16orf97H3BN30 126 aa9.77□□□□□ -0.85
SHMT2-212ENST00000554467 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-212ENST00000554467 AMBPP02760 352 aa9.77□□□□□ -0.85
SHMT2-212ENST00000554467 PSG2P11465 335 aa9.77□□□□□ -0.85
SHMT2-212ENST00000554467 GLRXP35754 106 aa9.77□□□□□ -0.85
SHMT2-212ENST00000554467 LINC00205P59089 165 aa9.77□□□□□ -0.85
SHMT2-212ENST00000554467 AKR1C8PQ5T2L2 129 aa9.77□□□□□ -0.85
SHMT2-212ENST00000554467 DUX4L9Q6RFH8 374 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-212ENST00000554467 ZNF808Q8N4W9 903 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-212ENST00000554467 ST8SIA3O43173 380 aa9.76□□□□□ -0.85
SHMT2-212ENST00000554467 TMPRSS3P57727 454 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms