RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 Q6ZSV7 163 aa11.06□□□□□ -0.64
TUBB3-202ENST00000553656 PDPNQ86YL7 162 aa11.06□□□□□ -0.64
TUBB3-202ENST00000553656 OR5AN1Q8NGI8 311 aa11.06□□□□□ -0.64
TUBB3-202ENST00000553656 TAF15Q92804 592 aaKnown RBP eCLIP11.06□□□□□ -0.64
TUBB3-202ENST00000553656 MOB3AQ96BX8 217 aa11.06□□□□□ -0.64
TUBB3-202ENST00000553656 SLC35D1Q9NTN3 355 aa11.06□□□□□ -0.64
TUBB3-202ENST00000553656 RBMX2Q9Y388 322 aaKnown RBP11.06□□□□□ -0.64
TUBB3-202ENST00000553656 V9GYH0 126 aa11.06□□□□□ -0.64
TUBB3-202ENST00000553656 FGF16O43320 207 aa11.05□□□□□ -0.64
TUBB3-202ENST00000553656 PROP1O75360 226 aa11.05□□□□□ -0.64
TUBB3-202ENST00000553656 RRASP10301 218 aa11.05□□□□□ -0.64
TUBB3-202ENST00000553656 S100GP29377 79 aa11.05□□□□□ -0.64
TUBB3-202ENST00000553656 ETV6P41212 452 aa11.05□□□□□ -0.64
TUBB3-202ENST00000553656 MSMO1Q15800 293 aa11.05□□□□□ -0.64
TUBB3-202ENST00000553656 ABCA11PQ4W5N1 156 aa11.05□□□□□ -0.64
TUBB3-202ENST00000553656 FBLN7Q53RD9 439 aa11.05□□□□□ -0.64
TUBB3-202ENST00000553656 AWAT1Q58HT5 328 aa11.05□□□□□ -0.64
TUBB3-202ENST00000553656 KCTD9Q7L273 389 aa11.05□□□□□ -0.64
TUBB3-202ENST00000553656 Q8N402 240 aa11.05□□□□□ -0.64
TUBB3-202ENST00000553656 ARRDC1Q8N5I2 433 aa11.05□□□□□ -0.64
TUBB3-202ENST00000553656 Q8N6K4 173 aa11.05□□□□□ -0.64
TUBB3-202ENST00000553656 ZNF383Q8NA42 475 aa11.05□□□□□ -0.64
TUBB3-202ENST00000553656 ZBTB34Q8NCN2 500 aa11.05□□□□□ -0.64
TUBB3-202ENST00000553656 HSD17B10Q99714 261 aaKnown RBP11.05□□□□□ -0.64
TUBB3-202ENST00000553656 THAP7Q9BT49 309 aaPredicted RBP11.05□□□□□ -0.64
TUBB3-202ENST00000553656 TINAGL1Q9GZM7 467 aaPredicted RBP11.05□□□□□ -0.64
TUBB3-202ENST00000553656 C16orf95Q9H693 158 aa11.05□□□□□ -0.64
TUBB3-202ENST00000553656 CCL28Q9NRJ3 127 aa11.05□□□□□ -0.64
TUBB3-202ENST00000553656 KIAA1456Q9P272 454 aa11.05□□□□□ -0.64
TUBB3-202ENST00000553656 PRELID3BQ9Y3B1 194 aa11.05□□□□□ -0.64
TUBB3-202ENST00000553656 CLPSL1A2RUU4 121 aa11.04□□□□□ -0.64
TUBB3-202ENST00000553656 PEX14O75381 377 aa11.04□□□□□ -0.64
TUBB3-202ENST00000553656 AMY2AP04746 511 aa11.04□□□□□ -0.64
TUBB3-202ENST00000553656 AKAIN1P0CW23 69 aa11.04□□□□□ -0.64
TUBB3-202ENST00000553656 MDKP21741 143 aaPredicted RBP11.04□□□□□ -0.64
TUBB3-202ENST00000553656 DUTP33316 252 aaKnown RBP11.04□□□□□ -0.64
TUBB3-202ENST00000553656 INPP1P49441 399 aa11.04□□□□□ -0.64
TUBB3-202ENST00000553656 AP3S2P59780 193 aa11.04□□□□□ -0.64
TUBB3-202ENST00000553656 CATR1Q13166 79 aa11.04□□□□□ -0.64
TUBB3-202ENST00000553656 C9orf152Q5JTZ5 239 aa11.04□□□□□ -0.64
TUBB3-202ENST00000553656 ZNF660Q6AZW8 331 aaPredicted RBP11.04□□□□□ -0.64
TUBB3-202ENST00000553656 LPCAT3Q6P1A2 487 aa11.04□□□□□ -0.64
TUBB3-202ENST00000553656 C11orf88Q6PI97 169 aa11.04□□□□□ -0.64
TUBB3-202ENST00000553656 ZNF66Q6ZN08 573 aa11.04□□□□□ -0.64
TUBB3-202ENST00000553656 CMTM1Q8IZ96 169 aa11.04□□□□□ -0.64
TUBB3-202ENST00000553656 C5orf56Q8N8D9 126 aa11.04□□□□□ -0.64
TUBB3-202ENST00000553656 TCTEX1D2Q8WW35 142 aa11.04□□□□□ -0.64
TUBB3-202ENST00000553656 FLYWCH2Q96CP2 140 aaKnown RBP11.04□□□□□ -0.64
TUBB3-202ENST00000553656 C5orf30Q96GV9 206 aa11.04□□□□□ -0.64
TUBB3-202ENST00000553656 TSNAXQ99598 290 aaKnown RBP11.04□□□□□ -0.64
TUBB3-202ENST00000553656 RASL11BQ9BPW5 248 aa11.04□□□□□ -0.64
TUBB3-202ENST00000553656 DISC1C4P0D8 188 aa11.03□□□□□ -0.64
TUBB3-202ENST00000553656 NBR2O15453 112 aa11.03□□□□□ -0.64
TUBB3-202ENST00000553656 CD74P04233 296 aa11.03□□□□□ -0.64
TUBB3-202ENST00000553656 FAUP35544 74 aaKnown RBP11.03□□□□□ -0.64
TUBB3-202ENST00000553656 COMPP49747 757 aaPredicted RBP11.03□□□□□ -0.64
TUBB3-202ENST00000553656 LINC00205P59089 165 aa11.03□□□□□ -0.64
TUBB3-202ENST00000553656 RPS16P62249 146 aaKnown RBP11.03□□□□□ -0.64
TUBB3-202ENST00000553656 BLCAPP62952 87 aa11.03□□□□□ -0.64
TUBB3-202ENST00000553656 PLGLAQ15195 96 aa11.03□□□□□ -0.64
TUBB3-202ENST00000553656 ZNF79Q15937 498 aa11.03□□□□□ -0.64
TUBB3-202ENST00000553656 SCGB2B2Q4G0G5 96 aa11.03□□□□□ -0.64
TUBB3-202ENST00000553656 C3orf56Q8N813 242 aa11.03□□□□□ -0.64
TUBB3-202ENST00000553656 BVESQ8NE79 360 aa11.03□□□□□ -0.64
TUBB3-202ENST00000553656 LINC01006Q8NI28 216 aa11.03□□□□□ -0.64
TUBB3-202ENST00000553656 RNF5Q99942 180 aa11.03□□□□□ -0.64
TUBB3-202ENST00000553656 FXYD6Q9H0Q3 95 aa11.03□□□□□ -0.64
TUBB3-202ENST00000553656 ZNF702PQ9H963 129 aa11.03□□□□□ -0.64
TUBB3-202ENST00000553656 LIN7CQ9NUP9 197 aaKnown RBP11.03□□□□□ -0.64
TUBB3-202ENST00000553656 PTTG2Q9NZH5 202 aa11.03□□□□□ -0.64
TUBB3-202ENST00000553656 RNF114Q9Y508 228 aa11.03□□□□□ -0.64
TUBB3-202ENST00000553656 MMP24Q9Y5R2 645 aa11.03□□□□□ -0.64
TUBB3-202ENST00000553656 ANKRD20A5PA0PJZ0 165 aa11.02□□□□□ -0.65
TUBB3-202ENST00000553656 HAX1O00165 279 aa11.02□□□□□ -0.65
TUBB3-202ENST00000553656 GPR31O00270 319 aa11.02□□□□□ -0.65
TUBB3-202ENST00000553656 SHOXO15266 292 aa11.02□□□□□ -0.65
TUBB3-202ENST00000553656 TNFSF12O43508 249 aa11.02□□□□□ -0.65
TUBB3-202ENST00000553656 FCGR3BO75015 233 aa11.02□□□□□ -0.65
TUBB3-202ENST00000553656 IGLV2-14P01704 120 aa11.02□□□□□ -0.65
TUBB3-202ENST00000553656 PGAM2P15259 253 aa11.02□□□□□ -0.65
TUBB3-202ENST00000553656 VDAC2P45880 294 aaPredicted RBP11.02□□□□□ -0.65
TUBB3-202ENST00000553656 ZNF45Q02386 682 aa11.02□□□□□ -0.65
TUBB3-202ENST00000553656 OR2B11Q5JQS5 317 aa11.02□□□□□ -0.65
TUBB3-202ENST00000553656 AADACL3Q5VUY0 350 aa11.02□□□□□ -0.65
TUBB3-202ENST00000553656 TRIQKQ629K1 86 aa11.02□□□□□ -0.65
TUBB3-202ENST00000553656 ZNF818PQ6ZRF7 136 aa11.02□□□□□ -0.65
TUBB3-202ENST00000553656 SLC38A6Q8IZM9 456 aa11.02□□□□□ -0.65
TUBB3-202ENST00000553656 Q8N2B8 174 aa11.02□□□□□ -0.65
TUBB3-202ENST00000553656 TOMM5Q8N4H5 51 aa11.02□□□□□ -0.65
TUBB3-202ENST00000553656 GDPD1Q8N9F7 314 aa11.02□□□□□ -0.65
TUBB3-202ENST00000553656 Q8N9W7 124 aa11.02□□□□□ -0.65
TUBB3-202ENST00000553656 POC5Q8NA72 575 aa11.02□□□□□ -0.65
TUBB3-202ENST00000553656 HARBI1Q96MB7 349 aa11.02□□□□□ -0.65
TUBB3-202ENST00000553656 SRRQ9GZT4 340 aa11.02□□□□□ -0.65
TUBB3-202ENST00000553656 MCUBQ9NWR8 336 aa11.02□□□□□ -0.65
TUBB3-202ENST00000553656 SH2D7A6NKC9 451 aaPredicted RBP11.01□□□□□ -0.65
TUBB3-202ENST00000553656 LINC00473A8K010 186 aa11.01□□□□□ -0.65
TUBB3-202ENST00000553656 SPDEFO95238 335 aa11.01□□□□□ -0.65
TUBB3-202ENST00000553656 CRYZL1O95825 349 aa11.01□□□□□ -0.65
TUBB3-202ENST00000553656 IGKV1-16P04430 117 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms