RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 CDNFQ49AH0 187 aa14.14□□□□□ -0.15
SHMT2-206ENST00000553529 DEFB121Q5J5C9 76 aa14.14□□□□□ -0.15
SHMT2-206ENST00000553529 EDARADDQ8WWZ3 215 aa14.14□□□□□ -0.15
SHMT2-206ENST00000553529 PRR25Q96S07 402 aa14.14□□□□□ -0.15
SHMT2-206ENST00000553529 ZNF221Q9UK13 617 aa14.14□□□□□ -0.15
SHMT2-206ENST00000553529 SRRM4A7MD48 611 aaKnown RBP14.13□□□□□ -0.15
SHMT2-206ENST00000553529 NOTOA8MTQ0 251 aa14.13□□□□□ -0.15
SHMT2-206ENST00000553529 I3L521 148 aa14.13□□□□□ -0.15
SHMT2-206ENST00000553529 MRPS14O60783 128 aaKnown RBP14.13□□□□□ -0.15
SHMT2-206ENST00000553529 IGHV3-11P01762 117 aa14.13□□□□□ -0.15
SHMT2-206ENST00000553529 TFAP2AP05549 437 aa14.13□□□□□ -0.15
SHMT2-206ENST00000553529 APELAP0DMC3 54 aa14.13□□□□□ -0.15
SHMT2-206ENST00000553529 RAB9AP51151 201 aa14.13□□□□□ -0.15
SHMT2-206ENST00000553529 SLURP1P55000 103 aa14.13□□□□□ -0.15
SHMT2-206ENST00000553529 RPS16P62249 146 aaKnown RBP14.13□□□□□ -0.15
SHMT2-206ENST00000553529 FHL3Q13643 280 aa14.13□□□□□ -0.15
SHMT2-206ENST00000553529 MRGPRG-AS1Q2M3A8 158 aa14.13□□□□□ -0.15
SHMT2-206ENST00000553529 SFXN4Q6P4A7 337 aa14.13□□□□□ -0.15
SHMT2-206ENST00000553529 LFNGQ8NES3 379 aa14.13□□□□□ -0.15
SHMT2-206ENST00000553529 GRPEL2Q8TAA5 225 aa14.13□□□□□ -0.15
SHMT2-206ENST00000553529 SLC25A38Q96DW6 304 aa14.13□□□□□ -0.15
SHMT2-206ENST00000553529 GON7Q9BXV9 100 aa14.13□□□□□ -0.15
SHMT2-206ENST00000553529 SLC35D1Q9NTN3 355 aa14.13□□□□□ -0.15
SHMT2-206ENST00000553529 SCOCQ9UIL1 159 aa14.13□□□□□ -0.15
SHMT2-206ENST00000553529 LINC00473A8K010 186 aa14.12□□□□□ -0.15
SHMT2-206ENST00000553529 NFYAP23511 347 aaPredicted RBP14.12□□□□□ -0.15
SHMT2-206ENST00000553529 MRPS15P82914 257 aaKnown RBP14.12□□□□□ -0.15
SHMT2-206ENST00000553529 PPP1R27Q86WC6 154 aa14.12□□□□□ -0.15
SHMT2-206ENST00000553529 H1FOOQ8IZA3 346 aaPredicted RBP14.12□□□□□ -0.15
SHMT2-206ENST00000553529 BVESQ8NE79 360 aa14.12□□□□□ -0.15
SHMT2-206ENST00000553529 OR10J5Q8NHC4 309 aa14.12□□□□□ -0.15
SHMT2-206ENST00000553529 GPHA2Q96T91 129 aa14.12□□□□□ -0.15
SHMT2-206ENST00000553529 ST6GALNAC5Q9BVH7 336 aa14.12□□□□□ -0.15
SHMT2-206ENST00000553529 TOLLIPQ9H0E2 274 aa14.12□□□□□ -0.15
SHMT2-206ENST00000553529 Q9H521 79 aa14.12□□□□□ -0.15
SHMT2-206ENST00000553529 ZNF580Q9UK33 172 aa14.12□□□□□ -0.15
SHMT2-206ENST00000553529 MGAT4AQ9UM21 535 aa14.12□□□□□ -0.15
SHMT2-206ENST00000553529 NUBP2Q9Y5Y2 271 aa14.12□□□□□ -0.15
SHMT2-206ENST00000553529 IGHV4OR15-8A0A075B7B6 117 aa14.11□□□□□ -0.15
SHMT2-206ENST00000553529 A0A087WW49 117 aa14.11□□□□□ -0.15
SHMT2-206ENST00000553529 IGKV1D-13A0A0B4J2D9 117 aa14.11□□□□□ -0.15
SHMT2-206ENST00000553529 IGKV1-13P0DP09 117 aa14.11□□□□□ -0.15
SHMT2-206ENST00000553529 GALP22466 123 aa14.11□□□□□ -0.15
SHMT2-206ENST00000553529 TAGLNQ01995 201 aaKnown RBP14.11□□□□□ -0.15
SHMT2-206ENST00000553529 ZNF260Q3ZCT1 412 aa14.11□□□□□ -0.15
SHMT2-206ENST00000553529 UNQ5815/PRO19632Q6UWF5 114 aa14.11□□□□□ -0.15
SHMT2-206ENST00000553529 IDO2Q6ZQW0 420 aa14.11□□□□□ -0.15
SHMT2-206ENST00000553529 OR1N2Q8NGR9 330 aa14.11□□□□□ -0.15
SHMT2-206ENST00000553529 FCGR1BQ92637 280 aa14.11□□□□□ -0.15
SHMT2-206ENST00000553529 SSR3Q9UNL2 185 aa14.11□□□□□ -0.15
SHMT2-206ENST00000553529 SEC14L6B5MCN3 397 aa14.1□□□□□ -0.15
SHMT2-206ENST00000553529 DUS4LO95620 317 aaKnown RBP14.1□□□□□ -0.15
SHMT2-206ENST00000553529 CRYGBP07316 175 aa14.1□□□□□ -0.15
SHMT2-206ENST00000553529 CD36P16671 472 aa14.1□□□□□ -0.15
SHMT2-206ENST00000553529 MC5RP33032 325 aa14.1□□□□□ -0.15
SHMT2-206ENST00000553529 CRIP2P52943 208 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-206ENST00000553529 OR2B11Q5JQS5 317 aa14.1□□□□□ -0.15
SHMT2-206ENST00000553529 IDNKQ5T6J7 187 aa14.1□□□□□ -0.15
SHMT2-206ENST00000553529 ZNF660Q6AZW8 331 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-206ENST00000553529 TMEM65Q6PI78 240 aa14.1□□□□□ -0.15
SHMT2-206ENST00000553529 HAPLN4Q86UW8 402 aa14.1□□□□□ -0.15
SHMT2-206ENST00000553529 UBE2E2Q96LR5 201 aa14.1□□□□□ -0.15
SHMT2-206ENST00000553529 GINS4Q9BRT9 223 aa14.1□□□□□ -0.15
SHMT2-206ENST00000553529 METTL21EPA6NDL7 271 aa14.09□□□□□ -0.15
SHMT2-206ENST00000553529 RBMXL2O75526 392 aaKnown RBP14.09□□□□□ -0.15
SHMT2-206ENST00000553529 IGLV2-14P01704 120 aa14.09□□□□□ -0.15
SHMT2-206ENST00000553529 OR5H8P0DN80 308 aa14.09□□□□□ -0.15
SHMT2-206ENST00000553529 TALDO1P37837 337 aa14.09□□□□□ -0.15
SHMT2-206ENST00000553529 LSM3P62310 102 aaKnown RBP14.09□□□□□ -0.15
SHMT2-206ENST00000553529 RPL30P62888 115 aaKnown RBP14.09□□□□□ -0.15
SHMT2-206ENST00000553529 FXYD3Q14802 87 aa14.09□□□□□ -0.15
SHMT2-206ENST00000553529 HACD4Q5VWC8 232 aa14.09□□□□□ -0.15
SHMT2-206ENST00000553529 PDPNQ86YL7 162 aa14.09□□□□□ -0.15
SHMT2-206ENST00000553529 GVQW1Q8N7I0 195 aa14.09□□□□□ -0.15
SHMT2-206ENST00000553529 OR5M8Q8NGP6 311 aa14.09□□□□□ -0.15
SHMT2-206ENST00000553529 DDB2Q92466 427 aa14.09□□□□□ -0.15
SHMT2-206ENST00000553529 DCUN1D4Q92564 292 aa14.09□□□□□ -0.15
SHMT2-206ENST00000553529 DLX4Q92988 240 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-206ENST00000553529 FLYWCH2Q96CP2 140 aaKnown RBP14.09□□□□□ -0.15
SHMT2-206ENST00000553529 FOXA2Q9Y261 457 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-206ENST00000553529 VSIG4Q9Y279 399 aa14.09□□□□□ -0.15
SHMT2-206ENST00000553529 APOA2P02652 100 aa14.08□□□□□ -0.16
SHMT2-206ENST00000553529 SLC6A1P30531 599 aa14.08□□□□□ -0.16
SHMT2-206ENST00000553529 ECI1P42126 302 aa14.08□□□□□ -0.16
SHMT2-206ENST00000553529 ACTBL2Q562R1 376 aa14.08□□□□□ -0.16
SHMT2-206ENST00000553529 OR5T1Q8NG75 326 aa14.08□□□□□ -0.16
SHMT2-206ENST00000553529 ARPC1AQ92747 370 aa14.08□□□□□ -0.16
SHMT2-206ENST00000553529 HARBI1Q96MB7 349 aa14.08□□□□□ -0.16
SHMT2-206ENST00000553529 YTHDF1Q9BYJ9 559 aaKnown RBP14.08□□□□□ -0.16
SHMT2-206ENST00000553529 RHBDL2Q9NX52 303 aa14.08□□□□□ -0.16
SHMT2-206ENST00000553529 RBM7Q9Y580 266 aaKnown RBP14.08□□□□□ -0.16
SHMT2-206ENST00000553529 MEIS3P1A6NDR6 274 aa14.07□□□□□ -0.16
SHMT2-206ENST00000553529 RBBP9O75884 186 aa14.07□□□□□ -0.16
SHMT2-206ENST00000553529 DUTP33316 252 aaKnown RBP14.07□□□□□ -0.16
SHMT2-206ENST00000553529 SERPINB10P48595 397 aa14.07□□□□□ -0.16
SHMT2-206ENST00000553529 ZNF616Q08AN1 781 aa14.07□□□□□ -0.16
SHMT2-206ENST00000553529 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.07□□□□□ -0.16
SHMT2-206ENST00000553529 ADAM30Q9UKF2 790 aa14.07□□□□□ -0.16
SHMT2-206ENST00000553529 CRYZL1O95825 349 aa14.06□□□□□ -0.16
SHMT2-206ENST00000553529 TPPP2P59282 170 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms