RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 REG4Q9BYZ8 158 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 HIPK2Q9H2X6 1198 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 IFI27L2Q9H2X8 130 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 MMP26Q9NRE1 261 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 CISD1Q9NZ45 108 aaKnown RBP6.04□□□□□ -1.44
ATXN3-221ENST00000553498 SLC25A10Q9UBX3 287 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-221ENST00000553498 HSPB7Q9UBY9 170 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 CACNG5Q9UF02 275 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 RPUSD1Q9UJJ7 312 aaKnown RBP6.04□□□□□ -1.44
ATXN3-221ENST00000553498 RNF150Q9ULK6 438 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 PSG11Q9UQ72 335 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 LOC400499M0QZD8 3231 aa6.04□□□□□ -1.44
ATXN3-221ENST00000553498 ZNF705EA8MWA4 302 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-221ENST00000553498 TXNL1O43396 289 aa6.03□□□□□ -1.44
ATXN3-221ENST00000553498 KCNAB3O43448 404 aa6.03□□□□□ -1.44
ATXN3-221ENST00000553498 IFNA5P01569 189 aa6.03□□□□□ -1.44
ATXN3-221ENST00000553498 GYPAP02724 150 aa6.03□□□□□ -1.44
ATXN3-221ENST00000553498 RBP4P02753 201 aa6.03□□□□□ -1.44
ATXN3-221ENST00000553498 OR8U8P0C7N1 319 aa6.03□□□□□ -1.44
ATXN3-221ENST00000553498 NQO2P16083 231 aa6.03□□□□□ -1.44
ATXN3-221ENST00000553498 ERVK-16P61578 105 aa6.03□□□□□ -1.44
ATXN3-221ENST00000553498 RPP30P78346 268 aaKnown RBP6.03□□□□□ -1.44
ATXN3-221ENST00000553498 TNFRSF9Q07011 255 aa6.03□□□□□ -1.44
ATXN3-221ENST00000553498 ATP6V1FQ16864 119 aa6.03□□□□□ -1.44
ATXN3-221ENST00000553498 MST1LQ2TV78 715 aa6.03□□□□□ -1.44
ATXN3-221ENST00000553498 SPRNQ5BIV9 151 aa6.03□□□□□ -1.44
ATXN3-221ENST00000553498 HEPN1Q6WQI6 88 aa6.03□□□□□ -1.44
ATXN3-221ENST00000553498 SLC25A48Q6ZT89 311 aaKnown RBP6.03□□□□□ -1.44
ATXN3-221ENST00000553498 H2BFWTQ7Z2G1 175 aa6.03□□□□□ -1.44
ATXN3-221ENST00000553498 PUSL1Q8N0Z8 303 aaKnown RBP6.03□□□□□ -1.44
ATXN3-221ENST00000553498 TPRX1Q8N7U7 411 aa6.03□□□□□ -1.44
ATXN3-221ENST00000553498 ZNF439Q8NDP4 499 aa6.03□□□□□ -1.44
ATXN3-221ENST00000553498 OR1S2Q8NGQ3 325 aa6.03□□□□□ -1.44
ATXN3-221ENST00000553498 OR52E5Q8NH55 327 aa6.03□□□□□ -1.44
ATXN3-221ENST00000553498 OR4S2Q8NH73 311 aa6.03□□□□□ -1.44
ATXN3-221ENST00000553498 LYPD6BQ8NI32 183 aa6.03□□□□□ -1.44
ATXN3-221ENST00000553498 RFESDQ8TAC1 157 aa6.03□□□□□ -1.44
ATXN3-221ENST00000553498 NEU4Q8WWR8 484 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-221ENST00000553498 TNFRSF14Q92956 283 aa6.03□□□□□ -1.44
ATXN3-221ENST00000553498 CXorf58Q96LI9 332 aa6.03□□□□□ -1.44
ATXN3-221ENST00000553498 ZNF714Q96N38 554 aa6.03□□□□□ -1.44
ATXN3-221ENST00000553498 S1PR3Q99500 378 aa6.03□□□□□ -1.44
ATXN3-221ENST00000553498 TSNAXQ99598 290 aaKnown RBP6.03□□□□□ -1.44
ATXN3-221ENST00000553498 ATP5SQ99766 215 aa6.03□□□□□ -1.44
ATXN3-221ENST00000553498 PARP12Q9H0J9 701 aaKnown RBP6.03□□□□□ -1.44
ATXN3-221ENST00000553498 RAB1BQ9H0U4 201 aa6.03□□□□□ -1.44
ATXN3-221ENST00000553498 SMDT1Q9H4I9 107 aa6.03□□□□□ -1.44
ATXN3-221ENST00000553498 NUP50Q9UKX7 468 aa6.03□□□□□ -1.44
ATXN3-221ENST00000553498 ZNF407Q9C0G0 2248 aa6.03□□□□□ -1.44
ATXN3-221ENST00000553498 ZFHX4Q86UP3 3567 aa6.03□□□□□ -1.44
ATXN3-221ENST00000553498 A0A087X0M5 115 aa6.02□□□□□ -1.45
ATXN3-221ENST00000553498 A0A0G2JRQ6 117 aa6.02□□□□□ -1.45
ATXN3-221ENST00000553498 A0A1B0GX30 115 aa6.02□□□□□ -1.45
ATXN3-221ENST00000553498 IGSF23A1L1A6 192 aa6.02□□□□□ -1.45
ATXN3-221ENST00000553498 BTBD17A6NE02 478 aa6.02□□□□□ -1.45
ATXN3-221ENST00000553498 FAM24AA6NFZ4 105 aa6.02□□□□□ -1.45
ATXN3-221ENST00000553498 MARCH11A6NNE9 402 aa6.02□□□□□ -1.45
ATXN3-221ENST00000553498 HRASP01112 189 aa6.02□□□□□ -1.45
ATXN3-221ENST00000553498 DANCRP0C864 163 aa6.02□□□□□ -1.45
ATXN3-221ENST00000553498 NDUFB7P17568 137 aa6.02□□□□□ -1.45
ATXN3-221ENST00000553498 M6PRP20645 277 aa6.02□□□□□ -1.45
ATXN3-221ENST00000553498 PAX9P55771 341 aa6.02□□□□□ -1.45
ATXN3-221ENST00000553498 ATP5IP56385 69 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-221ENST00000553498 UBE2KP61086 200 aa6.02□□□□□ -1.45
ATXN3-221ENST00000553498 RPL30P62888 115 aaKnown RBP6.02□□□□□ -1.45
ATXN3-221ENST00000553498 RPL31P62899 125 aaKnown RBP6.02□□□□□ -1.45
ATXN3-221ENST00000553498 TFF3Q07654 80 aa6.02□□□□□ -1.45
ATXN3-221ENST00000553498 PJVKQ0ZLH3 352 aa6.02□□□□□ -1.45
ATXN3-221ENST00000553498 POU2AF1Q16633 256 aa6.02□□□□□ -1.45
ATXN3-221ENST00000553498 FAM74A1Q5RGS3 127 aa6.02□□□□□ -1.45
ATXN3-221ENST00000553498 ZNF429Q86V71 674 aa6.02□□□□□ -1.45
ATXN3-221ENST00000553498 LINC00311Q8N616 119 aa6.02□□□□□ -1.45
ATXN3-221ENST00000553498 FAM216BQ8N7L0 139 aa6.02□□□□□ -1.45
ATXN3-221ENST00000553498 LFNGQ8NES3 379 aa6.02□□□□□ -1.45
ATXN3-221ENST00000553498 DEFB108BQ8NET1 73 aa6.02□□□□□ -1.45
ATXN3-221ENST00000553498 OR5C1Q8NGR4 320 aa6.02□□□□□ -1.45
ATXN3-221ENST00000553498 UBALD1Q8TB05 177 aa6.02□□□□□ -1.45
ATXN3-221ENST00000553498 ZNF596Q8TC21 504 aa6.02□□□□□ -1.45
ATXN3-221ENST00000553498 DDB2Q92466 427 aa6.02□□□□□ -1.45
ATXN3-221ENST00000553498 CCL17Q92583 94 aa6.02□□□□□ -1.45
ATXN3-221ENST00000553498 PINX1Q96BK5 328 aaKnown RBP6.02□□□□□ -1.45
ATXN3-221ENST00000553498 CLCC1Q96S66 551 aa6.02□□□□□ -1.45
ATXN3-221ENST00000553498 CBLN4Q9NTU7 201 aa6.02□□□□□ -1.45
ATXN3-221ENST00000553498 PSENENQ9NZ42 101 aa6.02□□□□□ -1.45
ATXN3-221ENST00000553498 RIF1Q5UIP0 2472 aaKnown RBP6.02□□□□□ -1.45
ATXN3-221ENST00000553498 AKAP13Q12802 2813 aa6.02□□□□□ -1.45
ATXN3-221ENST00000553498 CELSR3Q9NYQ7 3312 aa6.01□□□□□ -1.45
ATXN3-221ENST00000553498 ARHGAP21Q5T5U3 1957 aa6.01□□□□□ -1.45
ATXN3-221ENST00000553498 IGHV3-43A0A0B4J1X8 118 aa6.01□□□□□ -1.45
ATXN3-221ENST00000553498 hCG_1809904A0A1W2PP81 198 aa6.01□□□□□ -1.45
ATXN3-221ENST00000553498 A0A1W2PPE2 198 aa6.01□□□□□ -1.45
ATXN3-221ENST00000553498 A0A1W2PR64 198 aa6.01□□□□□ -1.45
ATXN3-221ENST00000553498 A0A1W2PRV1 198 aa6.01□□□□□ -1.45
ATXN3-221ENST00000553498 LINC00473A8K010 186 aa6.01□□□□□ -1.45
ATXN3-221ENST00000553498 C17orf98A8MV24 154 aa6.01□□□□□ -1.45
ATXN3-221ENST00000553498 DEFB108AA8MXU0 73 aa6.01□□□□□ -1.45
ATXN3-221ENST00000553498 M0R1X1 148 aa6.01□□□□□ -1.45
ATXN3-221ENST00000553498 RAMP3O60896 148 aa6.01□□□□□ -1.45
ATXN3-221ENST00000553498 S1PR2O95136 353 aa6.01□□□□□ -1.45
ATXN3-221ENST00000553498 TMEM50AO95807 157 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms