RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 LGALS7P47929 136 aa6.83□□□□□ -1.32
SYNE2-209ENST00000553308 RPS27AP62979 156 aaKnown RBP6.83□□□□□ -1.32
SYNE2-209ENST00000553308 HLA-DRB3P79483 266 aa6.83□□□□□ -1.32
SYNE2-209ENST00000553308 EXOSC2Q13868 293 aaKnown RBP6.83□□□□□ -1.32
SYNE2-209ENST00000553308 GUCA2BQ16661 112 aa6.83□□□□□ -1.32
SYNE2-209ENST00000553308 DEFB114Q30KQ6 69 aa6.83□□□□□ -1.32
SYNE2-209ENST00000553308 MOB1BQ7L9L4 216 aa6.83□□□□□ -1.32
SYNE2-209ENST00000553308 RPP25LQ8N5L8 163 aaKnown RBP6.83□□□□□ -1.32
SYNE2-209ENST00000553308 ZNF485Q8NCK3 441 aa6.83□□□□□ -1.32
SYNE2-209ENST00000553308 ADAD2Q8NCV1 583 aaKnown RBP6.83□□□□□ -1.32
SYNE2-209ENST00000553308 EDARADDQ8WWZ3 215 aa6.83□□□□□ -1.32
SYNE2-209ENST00000553308 SNAPC3Q92966 411 aa6.83□□□□□ -1.32
SYNE2-209ENST00000553308 WDR89Q96FK6 387 aaPredicted RBP6.83□□□□□ -1.32
SYNE2-209ENST00000553308 USMG5Q96IX5 58 aa6.83□□□□□ -1.32
SYNE2-209ENST00000553308 TMEM68Q96MH6 324 aa6.83□□□□□ -1.32
SYNE2-209ENST00000553308 UQCC2Q9BRT2 126 aa6.83□□□□□ -1.32
SYNE2-209ENST00000553308 TMEM59Q9BXS4 323 aa6.83□□□□□ -1.32
SYNE2-209ENST00000553308 SLC35D1Q9NTN3 355 aa6.83□□□□□ -1.32
SYNE2-209ENST00000553308 GHRLQ9UBU3 117 aa6.83□□□□□ -1.32
SYNE2-209ENST00000553308 ZNF221Q9UK13 617 aa6.83□□□□□ -1.32
SYNE2-209ENST00000553308 DIMT1Q9UNQ2 313 aaKnown RBP6.83□□□□□ -1.32
SYNE2-209ENST00000553308 EXOSC1Q9Y3B2 195 aaKnown RBP6.83□□□□□ -1.32
SYNE2-209ENST00000553308 SELENOKQ9Y6D0 94 aa6.83□□□□□ -1.32
SYNE2-209ENST00000553308 A0A0A6YYD4 124 aa6.82□□□□□ -1.32
SYNE2-209ENST00000553308 AIREO43918 545 aa6.82□□□□□ -1.32
SYNE2-209ENST00000553308 PRH1P02810 166 aa6.82□□□□□ -1.32
SYNE2-209ENST00000553308 SCTP09683 121 aa6.82□□□□□ -1.32
SYNE2-209ENST00000553308 ZBTB25P24278 435 aa6.82□□□□□ -1.32
SYNE2-209ENST00000553308 RASSF2P50749 326 aa6.82□□□□□ -1.32
SYNE2-209ENST00000553308 EWSR1Q01844 656 aaKnown RBP eCLIP6.82□□□□□ -1.32
SYNE2-209ENST00000553308 UNC119Q13432 240 aa6.82□□□□□ -1.32
SYNE2-209ENST00000553308 MRGPRG-AS1Q2M3A8 158 aa6.82□□□□□ -1.32
SYNE2-209ENST00000553308 KCNG3Q8TAE7 436 aa6.82□□□□□ -1.32
SYNE2-209ENST00000553308 PTX4Q96A99 478 aa6.82□□□□□ -1.32
SYNE2-209ENST00000553308 HARBI1Q96MB7 349 aa6.82□□□□□ -1.32
SYNE2-209ENST00000553308 PHB2Q99623 299 aa6.82□□□□□ -1.32
SYNE2-209ENST00000553308 OVOL2Q9BRP0 275 aa6.82□□□□□ -1.32
SYNE2-209ENST00000553308 TM2D1Q9BX74 207 aa6.82□□□□□ -1.32
SYNE2-209ENST00000553308 AKIP1Q9NQ31 210 aa6.82□□□□□ -1.32
SYNE2-209ENST00000553308 ZC4H2Q9NQZ6 224 aa6.82□□□□□ -1.32
SYNE2-209ENST00000553308 ZNF230Q9UIE0 474 aaPredicted RBP6.82□□□□□ -1.32
SYNE2-209ENST00000553308 AK3Q9UIJ7 227 aa6.82□□□□□ -1.32
SYNE2-209ENST00000553308 TRBV6-6A0A0A6YYG2 114 aa6.81□□□□□ -1.32
SYNE2-209ENST00000553308 IGKV1-6A0A0C4DH72 117 aa6.81□□□□□ -1.32
SYNE2-209ENST00000553308 A0A0J9YWU9 116 aa6.81□□□□□ -1.32
SYNE2-209ENST00000553308 IRGMA1A4Y4 181 aa6.81□□□□□ -1.32
SYNE2-209ENST00000553308 NUPR2A6NF83 97 aa6.81□□□□□ -1.32
SYNE2-209ENST00000553308 MSGN1A6NI15 193 aa6.81□□□□□ -1.32
SYNE2-209ENST00000553308 C2orf70A6NJV1 201 aa6.81□□□□□ -1.32
SYNE2-209ENST00000553308 SRRM4A7MD48 611 aaKnown RBP6.81□□□□□ -1.32
SYNE2-209ENST00000553308 DEDDO75618 318 aa6.81□□□□□ -1.32
SYNE2-209ENST00000553308 OR9G9P0C7N8 305 aa6.81□□□□□ -1.32
SYNE2-209ENST00000553308 UBBP0CG47 229 aa6.81□□□□□ -1.32
SYNE2-209ENST00000553308 FOLR2P14207 255 aa6.81□□□□□ -1.32
SYNE2-209ENST00000553308 RHOGP84095 191 aa6.81□□□□□ -1.32
SYNE2-209ENST00000553308 ZNF45Q02386 682 aa6.81□□□□□ -1.32
SYNE2-209ENST00000553308 INSL4Q14641 139 aa6.81□□□□□ -1.32
SYNE2-209ENST00000553308 CACNG8Q8WXS5 425 aa6.81□□□□□ -1.32
SYNE2-209ENST00000553308 GGHQ92820 318 aa6.81□□□□□ -1.32
SYNE2-209ENST00000553308 C5orf30Q96GV9 206 aa6.81□□□□□ -1.32
SYNE2-209ENST00000553308 C9orf16Q9BUW7 83 aa6.81□□□□□ -1.32
SYNE2-209ENST00000553308 PLEKHJ1Q9NW61 149 aa6.81□□□□□ -1.32
SYNE2-209ENST00000553308 RDH8Q9NYR8 311 aa6.81□□□□□ -1.32
SYNE2-209ENST00000553308 PLECQ15149 4684 aaKnown RBP6.81□□□□□ -1.32
SYNE2-209ENST00000553308 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.8□□□□□ -1.32
SYNE2-209ENST00000553308 FAM223BA6NKX1 122 aa6.8□□□□□ -1.32
SYNE2-209ENST00000553308 TMEM14DPA8MWL7 114 aa6.8□□□□□ -1.32
SYNE2-209ENST00000553308 PPP5D1E7EU14 171 aa6.8□□□□□ -1.32
SYNE2-209ENST00000553308 SHOXO15266 292 aa6.8□□□□□ -1.32
SYNE2-209ENST00000553308 MPPED1O15442 326 aa6.8□□□□□ -1.32
SYNE2-209ENST00000553308 SOCS1O15524 211 aa6.8□□□□□ -1.32
SYNE2-209ENST00000553308 HLA-AP01891 365 aaKnown RBP6.8□□□□□ -1.32
SYNE2-209ENST00000553308 CELP19835 753 aa6.8□□□□□ -1.32
SYNE2-209ENST00000553308 KIR2DS2P43631 304 aa6.8□□□□□ -1.32
SYNE2-209ENST00000553308 TAS2R43P59537 309 aa6.8□□□□□ -1.32
SYNE2-209ENST00000553308 QRFPP83859 136 aa6.8□□□□□ -1.32
SYNE2-209ENST00000553308 TNXAQ16473 311 aa6.8□□□□□ -1.32
SYNE2-209ENST00000553308 C1orf100Q5SVJ3 147 aa6.8□□□□□ -1.32
SYNE2-209ENST00000553308 CEMP1Q6PRD7 247 aaPredicted RBP6.8□□□□□ -1.32
SYNE2-209ENST00000553308 IDO2Q6ZQW0 420 aa6.8□□□□□ -1.32
SYNE2-209ENST00000553308 LRRTM1Q86UE6 522 aa6.8□□□□□ -1.32
SYNE2-209ENST00000553308 FAM223AQ8IWN6 122 aa6.8□□□□□ -1.32
SYNE2-209ENST00000553308 TMEM61Q8N0U2 210 aa6.8□□□□□ -1.32
SYNE2-209ENST00000553308 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.8□□□□□ -1.32
SYNE2-209ENST00000553308 SRSF12Q8WXF0 261 aaKnown RBP6.8□□□□□ -1.32
SYNE2-209ENST00000553308 TMEM80Q96HE8 168 aa6.8□□□□□ -1.32
SYNE2-209ENST00000553308 GGTLC1Q9BX51 225 aa6.8□□□□□ -1.32
SYNE2-209ENST00000553308 OR2D2Q9H210 308 aa6.8□□□□□ -1.32
SYNE2-209ENST00000553308 RIMS4Q9H426 269 aaPredicted RBP6.8□□□□□ -1.32
SYNE2-209ENST00000553308 Q9N2K0 584 aa6.8□□□□□ -1.32
SYNE2-209ENST00000553308 LOC102724200A0A096LPH7 203 aaPredicted RBP6.79□□□□□ -1.32
SYNE2-209ENST00000553308 TRBV9A0A0B4J1U6 114 aa6.79□□□□□ -1.32
SYNE2-209ENST00000553308 TUSC2O75896 110 aa6.79□□□□□ -1.32
SYNE2-209ENST00000553308 ATP5HO75947 161 aa6.79□□□□□ -1.32
SYNE2-209ENST00000553308 CD3GP09693 182 aa6.79□□□□□ -1.32
SYNE2-209ENST00000553308 MAPK3P27361 379 aaPredicted RBP6.79□□□□□ -1.32
SYNE2-209ENST00000553308 ATP5G2Q06055 141 aa6.79□□□□□ -1.32
SYNE2-209ENST00000553308 MED21Q13503 144 aa6.79□□□□□ -1.32
SYNE2-209ENST00000553308 PRSS8Q16651 343 aa6.79□□□□□ -1.32
SYNE2-209ENST00000553308 TMEM177Q53S58 311 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms