RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 FADS6Q8N9I5 356 aa4.1□□□□□ -1.75
LIMA1-214ENST00000552783 OR56B2PQ8NGI1 322 aa4.1□□□□□ -1.75
LIMA1-214ENST00000552783 ZCCHC14Q8WYQ9 949 aaKnown RBP4.1□□□□□ -1.75
LIMA1-214ENST00000552783 ZDHHC16Q969W1 377 aa4.1□□□□□ -1.75
LIMA1-214ENST00000552783 C10orf35Q96D05 121 aa4.1□□□□□ -1.75
LIMA1-214ENST00000552783 PARD6AQ9NPB6 346 aa4.1□□□□□ -1.75
LIMA1-214ENST00000552783 CLN8Q9UBY8 286 aa4.1□□□□□ -1.75
LIMA1-214ENST00000552783 PXMP4Q9Y6I8 212 aa4.1□□□□□ -1.75
LIMA1-214ENST00000552783 ADAMTS20P59510 1910 aa4.1□□□□□ -1.75
LIMA1-214ENST00000552783 TRAPPC2LH3BP13 241 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 SH2D1BO14796 132 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 SERF1AO75920 110 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 NDUFB4O95168 129 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 NDUFB8O95169 186 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 TYMSP04818 313 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 OR8B8Q15620 311 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 HLA-DRB5Q30154 266 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 CARFQ8N187 725 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 OR2Y1Q8NGV0 311 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 SAP25Q8TEE9 199 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 RAB40CQ96S21 281 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 PSMG3Q9BT73 122 aaPredicted RBP4.09□□□□□ -1.75
LIMA1-214ENST00000552783 OR2J1Q9GZK6 312 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 ZNF552Q9H707 407 aaPredicted RBP4.09□□□□□ -1.75
LIMA1-214ENST00000552783 PPP1R14DQ9NXH3 145 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 IL36GQ9NZH8 169 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 ATMQ13315 3056 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 TRAV38-1A0A0B4J264 116 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 TRAV24A0A0B4J272 114 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 SIRPB1O00241 398 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 SLC17A3O00476 420 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 OR10J1P30954 320 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 RAC1P63000 192 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 SLC38A11Q08AI6 406 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 PCOLCEQ15113 449 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 LTC4SQ16873 150 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 MAJINQ3KP22 176 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 MKXQ8IYA7 352 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 STPG4Q8N801 248 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 OR10G9Q8NGN4 311 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 OR10G7Q8NGN6 311 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 SGMS2Q8NHU3 365 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 PSMF1Q92530 271 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 ABHD14BQ96IU4 210 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 HSPB9Q9BQS6 159 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 HES7Q9BYE0 225 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 CHRNA10Q9GZZ6 450 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 PCED1AQ9H1Q7 454 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 TMEM106BQ9NUM4 274 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 TMEM38BQ9NVV0 291 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 ABI3Q9P2A4 366 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 B4GALT7Q9UBV7 327 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 TP73-AS1Q9UF72 201 aa4.09□□□□□ -1.75
LIMA1-214ENST00000552783 C11orf94C9JXX5 98 aa4.09□□□□□ -1.76
LIMA1-214ENST00000552783 MLNRO43193 412 aa4.09□□□□□ -1.76
LIMA1-214ENST00000552783 SIAH2O43255 324 aa4.09□□□□□ -1.76
LIMA1-214ENST00000552783 WDR1O75083 606 aa4.09□□□□□ -1.76
LIMA1-214ENST00000552783 RHBDL1O75783 438 aa4.09□□□□□ -1.76
LIMA1-214ENST00000552783 CLDN1O95832 211 aa4.09□□□□□ -1.76
LIMA1-214ENST00000552783 NGFP01138 241 aa4.09□□□□□ -1.76
LIMA1-214ENST00000552783 CCKARP32238 428 aa4.09□□□□□ -1.76
LIMA1-214ENST00000552783 LHX2P50458 406 aa4.09□□□□□ -1.76
LIMA1-214ENST00000552783 ARF1P84077 181 aaKnown RBP4.09□□□□□ -1.76
LIMA1-214ENST00000552783 SERF2P84101 59 aa4.09□□□□□ -1.76
LIMA1-214ENST00000552783 KRTAP27-1Q3LI81 207 aa4.09□□□□□ -1.76
LIMA1-214ENST00000552783 CISD2Q8N5K1 135 aaKnown RBP4.09□□□□□ -1.76
LIMA1-214ENST00000552783 Q8N7P7 452 aa4.09□□□□□ -1.76
LIMA1-214ENST00000552783 PLPPR2Q96GM1 343 aa4.09□□□□□ -1.76
LIMA1-214ENST00000552783 C5orf30Q96GV9 206 aa4.09□□□□□ -1.76
LIMA1-214ENST00000552783 WDYHV1Q96HA8 205 aa4.09□□□□□ -1.76
LIMA1-214ENST00000552783 MIEN1Q9BRT3 115 aa4.09□□□□□ -1.76
LIMA1-214ENST00000552783 OR2H1Q9GZK4 316 aa4.09□□□□□ -1.76
LIMA1-214ENST00000552783 DEFB127Q9H1M4 99 aa4.09□□□□□ -1.76
LIMA1-214ENST00000552783 DNAJC4Q9NNZ3 241 aa4.09□□□□□ -1.76
LIMA1-214ENST00000552783 ELOVL5Q9NYP7 299 aa4.09□□□□□ -1.76
LIMA1-214ENST00000552783 OR2W1Q9Y3N9 320 aa4.09□□□□□ -1.76
LIMA1-214ENST00000552783 LOXL2Q9Y4K0 774 aa4.09□□□□□ -1.76
LIMA1-214ENST00000552783 MED13Q9UHV7 2174 aa4.08□□□□□ -1.76
LIMA1-214ENST00000552783 DMXL1Q9Y485 3027 aa4.08□□□□□ -1.76
LIMA1-214ENST00000552783 ZFHX2Q9C0A1 2572 aaPredicted RBP4.08□□□□□ -1.76
LIMA1-214ENST00000552783 IGHV1-45A0A0A0MS14 117 aa4.08□□□□□ -1.76
LIMA1-214ENST00000552783 CD300LBA8K4G0 201 aa4.08□□□□□ -1.76
LIMA1-214ENST00000552783 TMEM250H0YL14 139 aa4.08□□□□□ -1.76
LIMA1-214ENST00000552783 CER1O95813 267 aa4.08□□□□□ -1.76
LIMA1-214ENST00000552783 PSMB3P49720 205 aa4.08□□□□□ -1.76
LIMA1-214ENST00000552783 SOX8P57073 446 aa4.08□□□□□ -1.76
LIMA1-214ENST00000552783 RAC3P60763 192 aa4.08□□□□□ -1.76
LIMA1-214ENST00000552783 PCBD1P61457 104 aa4.08□□□□□ -1.76
LIMA1-214ENST00000552783 TGFBR3Q03167 851 aa4.08□□□□□ -1.76
LIMA1-214ENST00000552783 PSG7Q13046 419 aa4.08□□□□□ -1.76
LIMA1-214ENST00000552783 IL11RAQ14626 422 aa4.08□□□□□ -1.76
LIMA1-214ENST00000552783 ACOT6Q3I5F7 207 aaPredicted RBP4.08□□□□□ -1.76
LIMA1-214ENST00000552783 FFAR4Q5NUL3 377 aa4.08□□□□□ -1.76
LIMA1-214ENST00000552783 PRR31Q5SQ13 230 aa4.08□□□□□ -1.76
LIMA1-214ENST00000552783 Q8N976 141 aa4.08□□□□□ -1.76
LIMA1-214ENST00000552783 CLDN23Q96B33 292 aa4.08□□□□□ -1.76
LIMA1-214ENST00000552783 FAM103A1Q9BTL3 118 aaKnown RBP4.08□□□□□ -1.76
LIMA1-214ENST00000552783 STRADBQ9C0K7 418 aa4.08□□□□□ -1.76
LIMA1-214ENST00000552783 PATZ1Q9HBE1 687 aaKnown RBP4.08□□□□□ -1.76
LIMA1-214ENST00000552783 FOXJ2Q9P0K8 574 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms