RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 MED19A0JLT2 244 aaPredicted RBP11.6□□□□□ -0.55
RAB3IP-216ENST00000552199 VSTM5A8MXK1 200 aa11.6□□□□□ -0.55
RAB3IP-216ENST00000552199 FAM157AC9JC47 383 aa11.6□□□□□ -0.55
RAB3IP-216ENST00000552199 ATXN7O15265 892 aaPredicted RBP11.6□□□□□ -0.55
RAB3IP-216ENST00000552199 SFTA3P0C7M3 94 aa11.6□□□□□ -0.55
RAB3IP-216ENST00000552199 RUNX1Q01196 453 aa11.6□□□□□ -0.55
RAB3IP-216ENST00000552199 SPANXN5Q5MJ07 72 aa11.6□□□□□ -0.55
RAB3IP-216ENST00000552199 ADAM5Q6NVV9 412 aa11.6□□□□□ -0.55
RAB3IP-216ENST00000552199 ZNF525Q8N782 197 aa11.6□□□□□ -0.55
RAB3IP-216ENST00000552199 ABHD14AQ9BUJ0 271 aa11.6□□□□□ -0.55
RAB3IP-216ENST00000552199 IFI27L2Q9H2X8 130 aa11.6□□□□□ -0.55
RAB3IP-216ENST00000552199 GFOD1Q9NXC2 390 aa11.6□□□□□ -0.55
RAB3IP-216ENST00000552199 CLN8Q9UBY8 286 aa11.6□□□□□ -0.55
RAB3IP-216ENST00000552199 PCNX1Q96RV3 2341 aa11.6□□□□□ -0.55
RAB3IP-216ENST00000552199 TRGV8A0A0C4DH27 118 aa11.6□□□□□ -0.55
RAB3IP-216ENST00000552199 M0R1X1 148 aa11.6□□□□□ -0.55
RAB3IP-216ENST00000552199 NUPL2O15504 423 aaKnown RBP11.6□□□□□ -0.55
RAB3IP-216ENST00000552199 HBG1P69891 147 aa11.6□□□□□ -0.55
RAB3IP-216ENST00000552199 HBG2P69892 147 aa11.6□□□□□ -0.55
RAB3IP-216ENST00000552199 PEA15Q15121 130 aa11.6□□□□□ -0.55
RAB3IP-216ENST00000552199 GUK1Q16774 197 aa11.6□□□□□ -0.55
RAB3IP-216ENST00000552199 GAB2Q9UQC2 676 aa11.6□□□□□ -0.55
RAB3IP-216ENST00000552199 TSPAN4O14817 238 aa11.59□□□□□ -0.55
RAB3IP-216ENST00000552199 IGHV3-7P01780 117 aa11.59□□□□□ -0.55
RAB3IP-216ENST00000552199 RAB7AP51149 207 aa11.59□□□□□ -0.55
RAB3IP-216ENST00000552199 RPL39P5Q59GN2 51 aa11.59□□□□□ -0.55
RAB3IP-216ENST00000552199 SLC25A24Q6NUK1 477 aa11.59□□□□□ -0.55
RAB3IP-216ENST00000552199 TMEM14EPQ6UXP3 125 aa11.59□□□□□ -0.55
RAB3IP-216ENST00000552199 THNSL2Q86YJ6 484 aa11.59□□□□□ -0.55
RAB3IP-216ENST00000552199 ZCCHC24Q8N2G6 241 aaKnown RBP11.59□□□□□ -0.55
RAB3IP-216ENST00000552199 FAM216BQ8N7L0 139 aa11.59□□□□□ -0.55
RAB3IP-216ENST00000552199 LFNGQ8NES3 379 aa11.59□□□□□ -0.55
RAB3IP-216ENST00000552199 CORO2AQ92828 525 aa11.59□□□□□ -0.55
RAB3IP-216ENST00000552199 R3HDM4Q96D70 268 aa11.59□□□□□ -0.55
RAB3IP-216ENST00000552199 FAM74A7A6NL05 159 aa11.58□□□□□ -0.55
RAB3IP-216ENST00000552199 MARCH11A6NNE9 402 aa11.58□□□□□ -0.55
RAB3IP-216ENST00000552199 SHISA9B4DS77 424 aa11.58□□□□□ -0.55
RAB3IP-216ENST00000552199 SLC31A2O15432 143 aa11.58□□□□□ -0.55
RAB3IP-216ENST00000552199 HPRT1P00492 218 aa11.58□□□□□ -0.55
RAB3IP-216ENST00000552199 F12P00748 615 aaPredicted RBP11.58□□□□□ -0.55
RAB3IP-216ENST00000552199 TAGLNQ01995 201 aaKnown RBP11.58□□□□□ -0.55
RAB3IP-216ENST00000552199 TLE1Q04724 770 aa11.58□□□□□ -0.55
RAB3IP-216ENST00000552199 FAM74A3Q4VXF1 159 aa11.58□□□□□ -0.55
RAB3IP-216ENST00000552199 NCMAPQ5T1S8 102 aa11.58□□□□□ -0.55
RAB3IP-216ENST00000552199 UTF1Q5T230 341 aa11.58□□□□□ -0.55
RAB3IP-216ENST00000552199 AKR1C8PQ5T2L2 129 aa11.58□□□□□ -0.55
RAB3IP-216ENST00000552199 TCF23Q7RTU1 214 aa11.58□□□□□ -0.55
RAB3IP-216ENST00000552199 SCGB1C1Q8TD33 95 aa11.58□□□□□ -0.55
RAB3IP-216ENST00000552199 C17orf50Q8WW18 174 aa11.58□□□□□ -0.55
RAB3IP-216ENST00000552199 EGLN1Q9GZT9 426 aa11.58□□□□□ -0.55
RAB3IP-216ENST00000552199 LINC00574Q9H8X3 128 aa11.58□□□□□ -0.55
RAB3IP-216ENST00000552199 ZNF729A6NN14 1252 aaPredicted RBP11.58□□□□□ -0.56
RAB3IP-216ENST00000552199 RBFOX2O43251 390 aaKnown RBP eCLIP11.58□□□□□ -0.56
RAB3IP-216ENST00000552199 FCGR3BO75015 233 aa11.58□□□□□ -0.56
RAB3IP-216ENST00000552199 SNAPINO95295 136 aa11.58□□□□□ -0.56
RAB3IP-216ENST00000552199 CASP6P55212 293 aa11.58□□□□□ -0.56
RAB3IP-216ENST00000552199 CT45A1Q5HYN5 189 aa11.58□□□□□ -0.56
RAB3IP-216ENST00000552199 SPSB3Q6PJ21 355 aa11.58□□□□□ -0.56
RAB3IP-216ENST00000552199 LILRB2Q8N423 598 aa11.58□□□□□ -0.56
RAB3IP-216ENST00000552199 CT45A3Q8NHU0 189 aa11.58□□□□□ -0.56
RAB3IP-216ENST00000552199 LEAP2Q969E1 77 aa11.58□□□□□ -0.56
RAB3IP-216ENST00000552199 EIF5A2Q9GZV4 153 aaKnown RBP11.58□□□□□ -0.56
RAB3IP-216ENST00000552199 IDI2-AS1Q9NZ38 188 aa11.58□□□□□ -0.56
RAB3IP-216ENST00000552199 PRELID3BQ9Y3B1 194 aa11.58□□□□□ -0.56
RAB3IP-216ENST00000552199 FBXO7Q9Y3I1 522 aa11.58□□□□□ -0.56
RAB3IP-216ENST00000552199 TRAV38-1A0A0B4J264 116 aa11.57□□□□□ -0.56
RAB3IP-216ENST00000552199 A0A1B0GW64 132 aa11.57□□□□□ -0.56
RAB3IP-216ENST00000552199 NKX6-3A6NJ46 265 aa11.57□□□□□ -0.56
RAB3IP-216ENST00000552199 PPIHO43447 177 aaKnown RBP11.57□□□□□ -0.56
RAB3IP-216ENST00000552199 H2AFB1P0C5Y9 115 aa11.57□□□□□ -0.56
RAB3IP-216ENST00000552199 OR8U8P0C7N1 319 aa11.57□□□□□ -0.56
RAB3IP-216ENST00000552199 LRRC75BQ2VPJ9 315 aa11.57□□□□□ -0.56
RAB3IP-216ENST00000552199 DPPA3Q6W0C5 159 aa11.57□□□□□ -0.56
RAB3IP-216ENST00000552199 DMRTC2Q8IXT2 367 aaPredicted RBP11.57□□□□□ -0.56
RAB3IP-216ENST00000552199 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.57□□□□□ -0.56
RAB3IP-216ENST00000552199 DTD1Q8TEA8 209 aa11.57□□□□□ -0.56
RAB3IP-216ENST00000552199 OR4C12Q96R67 309 aa11.57□□□□□ -0.56
RAB3IP-216ENST00000552199 PBDC1Q9BVG4 233 aa11.57□□□□□ -0.56
RAB3IP-216ENST00000552199 PARD6GQ9BYG4 376 aaPredicted RBP11.57□□□□□ -0.56
RAB3IP-216ENST00000552199 SAP30LQ9HAJ7 183 aa11.57□□□□□ -0.56
RAB3IP-216ENST00000552199 A0A1B0GV50 99 aa11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 FAM90A9PA6NNJ1 464 aa11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 E7EQL1 145 aa11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 ZG16O60844 167 aa11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 CA7P43166 264 aa11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 KIR2DS2P43631 304 aa11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 NPBWR1P48145 328 aa11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 PPT1P50897 306 aa11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 SLC38A11Q08AI6 406 aa11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 KLRB1Q12918 225 aa11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 TMEM30BQ3MIR4 351 aa11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 SP5Q6BEB4 398 aaPredicted RBP11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 C1orf229Q6ZS94 237 aaPredicted RBP11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 C1orf87Q8N0U7 546 aa11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 RNASE6Q93091 150 aaKnown RBP11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 CIB3Q96Q77 187 aaPredicted RBP11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 S1PR3Q99500 378 aa11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 RSG1Q9BU20 258 aa11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 HIPK2Q9H2X6 1198 aa11.56□□□□□ -0.56
RAB3IP-216ENST00000552199 TLN1Q9Y490 2541 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms