RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 GAL3ST2Q9H3Q3 398 aa10.26□□□□□ -0.77
VDR-208ENST00000550325 SELENOKQ9Y6D0 94 aa10.26□□□□□ -0.77
VDR-208ENST00000550325 BDP1A6H8Y1 2624 aa10.26□□□□□ -0.77
VDR-208ENST00000550325 CLDN15P56746 228 aa10.26□□□□□ -0.77
VDR-208ENST00000550325 PRR31Q5SQ13 230 aa10.26□□□□□ -0.77
VDR-208ENST00000550325 PLXDC1Q8IUK5 500 aa10.26□□□□□ -0.77
VDR-208ENST00000550325 ST6GALNAC6Q969X2 333 aa10.26□□□□□ -0.77
VDR-208ENST00000550325 LRFN3Q9BTN0 628 aa10.26□□□□□ -0.77
VDR-208ENST00000550325 NPCDR1Q9BY65 106 aa10.26□□□□□ -0.77
VDR-208ENST00000550325 PCED1AQ9H1Q7 454 aa10.26□□□□□ -0.77
VDR-208ENST00000550325 BET1LQ9NYM9 111 aa10.26□□□□□ -0.77
VDR-208ENST00000550325 SPTBN5Q9NRC6 3674 aaKnown RBP10.25□□□□□ -0.77
VDR-208ENST00000550325 HYPMO75409 117 aa10.25□□□□□ -0.77
VDR-208ENST00000550325 SELENOTP62341 195 aa10.25□□□□□ -0.77
VDR-208ENST00000550325 MRPL54Q6P161 138 aaKnown RBP10.25□□□□□ -0.77
VDR-208ENST00000550325 FAM58AQ8N1B3 248 aa10.25□□□□□ -0.77
VDR-208ENST00000550325 TIMM8BQ9Y5J9 83 aaPredicted RBP10.25□□□□□ -0.77
VDR-208ENST00000550325 hCG_38984A0A1B0GV85 526 aa10.25□□□□□ -0.77
VDR-208ENST00000550325 EPOPA6NHQ4 379 aa10.25□□□□□ -0.77
VDR-208ENST00000550325 LILRA5A6NI73 299 aa10.25□□□□□ -0.77
VDR-208ENST00000550325 A8MXE2 369 aa10.25□□□□□ -0.77
VDR-208ENST00000550325 KLF3P57682 345 aaPredicted RBP10.25□□□□□ -0.77
VDR-208ENST00000550325 YRDCQ86U90 279 aaKnown RBP10.25□□□□□ -0.77
VDR-208ENST00000550325 LYG1Q8N1E2 194 aa10.25□□□□□ -0.77
VDR-208ENST00000550325 ZNF596Q8TC21 504 aa10.25□□□□□ -0.77
VDR-208ENST00000550325 RNF2Q99496 336 aa10.25□□□□□ -0.77
VDR-208ENST00000550325 GNB4Q9HAV0 340 aa10.25□□□□□ -0.77
VDR-208ENST00000550325 MTCH1Q9NZJ7 389 aa10.25□□□□□ -0.77
VDR-208ENST00000550325 NKX6-3A6NJ46 265 aa10.25□□□□□ -0.77
VDR-208ENST00000550325 C17orf112F2Z3M2 114 aa10.25□□□□□ -0.77
VDR-208ENST00000550325 DUX1O43812 170 aa10.25□□□□□ -0.77
VDR-208ENST00000550325 WNT2P09544 360 aa10.25□□□□□ -0.77
VDR-208ENST00000550325 CRYGSP22914 178 aa10.25□□□□□ -0.77
VDR-208ENST00000550325 FXYD3Q14802 87 aa10.25□□□□□ -0.77
VDR-208ENST00000550325 PDLIM3Q53GG5 364 aaPredicted RBP10.25□□□□□ -0.77
VDR-208ENST00000550325 C10orf128Q5T292 105 aa10.25□□□□□ -0.77
VDR-208ENST00000550325 SLC23A3Q6PIS1 610 aa10.25□□□□□ -0.77
VDR-208ENST00000550325 SYT13Q7L8C5 426 aa10.25□□□□□ -0.77
VDR-208ENST00000550325 SAXO1Q8IYX7 474 aa10.25□□□□□ -0.77
VDR-208ENST00000550325 SPACA9Q96E40 222 aaPredicted RBP10.25□□□□□ -0.77
VDR-208ENST00000550325 LIN7CQ9NUP9 197 aaKnown RBP10.25□□□□□ -0.77
VDR-208ENST00000550325 CRIM1Q9NZV1 1036 aa10.25□□□□□ -0.77
VDR-208ENST00000550325 CD207Q9UJ71 328 aa10.25□□□□□ -0.77
VDR-208ENST00000550325 EYSQ5T1H1 3165 aa10.24□□□□□ -0.77
VDR-208ENST00000550325 PDE6DO43924 150 aa10.24□□□□□ -0.77
VDR-208ENST00000550325 CA6P23280 308 aa10.24□□□□□ -0.77
VDR-208ENST00000550325 LHX2P50458 406 aa10.24□□□□□ -0.77
VDR-208ENST00000550325 CENPVQ7Z7K6 275 aaPredicted RBP10.24□□□□□ -0.77
VDR-208ENST00000550325 FOXB1Q99853 325 aa10.24□□□□□ -0.77
VDR-208ENST00000550325 QTRT1Q9BXR0 403 aaKnown RBP10.24□□□□□ -0.77
VDR-208ENST00000550325 WDFY3Q8IZQ1 3526 aa10.24□□□□□ -0.77
VDR-208ENST00000550325 USF3Q68DE3 2245 aa10.24□□□□□ -0.77
VDR-208ENST00000550325 C5orf49A4QMS7 147 aa10.24□□□□□ -0.77
VDR-208ENST00000550325 RAMP3O60896 148 aa10.24□□□□□ -0.77
VDR-208ENST00000550325 SYNGR4O95473 234 aa10.24□□□□□ -0.77
VDR-208ENST00000550325 PTGDSP41222 190 aa10.24□□□□□ -0.77
VDR-208ENST00000550325 Q56UQ5 140 aa10.24□□□□□ -0.77
VDR-208ENST00000550325 TMEM54Q969K7 222 aa10.24□□□□□ -0.77
VDR-208ENST00000550325 PLPPR2Q96GM1 343 aa10.24□□□□□ -0.77
VDR-208ENST00000550325 DEPPQ9NTK1 212 aa10.24□□□□□ -0.77
VDR-208ENST00000550325 A0A0J9YW62 118 aa10.24□□□□□ -0.77
VDR-208ENST00000550325 A0A1W2PPC4 97 aa10.24□□□□□ -0.77
VDR-208ENST00000550325 ARL14EPLP0DKL9 152 aa10.24□□□□□ -0.77
VDR-208ENST00000550325 C1orf174Q8IYL3 243 aa10.24□□□□□ -0.77
VDR-208ENST00000550325 FAM234AQ9H0X4 552 aa10.24□□□□□ -0.77
VDR-208ENST00000550325 GCM1Q9NP62 436 aa10.24□□□□□ -0.77
VDR-208ENST00000550325 DPRXA6NFQ7 191 aa10.23□□□□□ -0.77
VDR-208ENST00000550325 DEGS1O15121 323 aa10.23□□□□□ -0.77
VDR-208ENST00000550325 COL8A2P25067 703 aa10.23□□□□□ -0.77
VDR-208ENST00000550325 LINC00310P59036 64 aa10.23□□□□□ -0.77
VDR-208ENST00000550325 FGF12P61328 243 aa10.23□□□□□ -0.77
VDR-208ENST00000550325 FOXL1Q12952 345 aa10.23□□□□□ -0.77
VDR-208ENST00000550325 UBE2V1Q13404 147 aa10.23□□□□□ -0.77
VDR-208ENST00000550325 ZNF324BQ6AW86 544 aaPredicted RBP10.23□□□□□ -0.77
VDR-208ENST00000550325 PCSK4Q6UW60 755 aa10.23□□□□□ -0.77
VDR-208ENST00000550325 ASCL4Q6XD76 172 aa10.23□□□□□ -0.77
VDR-208ENST00000550325 OR5A2Q8NGI9 324 aa10.23□□□□□ -0.77
VDR-208ENST00000550325 SSMEM1Q8WWF3 244 aa10.23□□□□□ -0.77
VDR-208ENST00000550325 OR2H1Q9GZK4 316 aa10.23□□□□□ -0.77
VDR-208ENST00000550325 HIPK2Q9H2X6 1198 aa10.23□□□□□ -0.77
VDR-208ENST00000550325 YPEL1O60688 119 aa10.23□□□□□ -0.77
VDR-208ENST00000550325 LTC4SQ16873 150 aa10.23□□□□□ -0.77
VDR-208ENST00000550325 FBLN7Q53RD9 439 aa10.23□□□□□ -0.77
VDR-208ENST00000550325 LDLRAD2Q5SZI1 272 aa10.23□□□□□ -0.77
VDR-208ENST00000550325 TMEM144Q7Z5S9 345 aa10.23□□□□□ -0.77
VDR-208ENST00000550325 YPEL2Q96QA6 119 aa10.23□□□□□ -0.77
VDR-208ENST00000550325 SRXN1Q9BYN0 137 aa10.23□□□□□ -0.77
VDR-208ENST00000550325 FSCN3Q9NQT6 498 aa10.23□□□□□ -0.77
VDR-208ENST00000550325 TMEM38BQ9NVV0 291 aa10.23□□□□□ -0.77
VDR-208ENST00000550325 TRBV20OR9-2A0A075B6H5 130 aa10.23□□□□□ -0.77
VDR-208ENST00000550325 CXCL13O43927 109 aa10.23□□□□□ -0.77
VDR-208ENST00000550325 TIAF1O95411 115 aa10.23□□□□□ -0.77
VDR-208ENST00000550325 SRIP30626 198 aa10.23□□□□□ -0.77
VDR-208ENST00000550325 RABEPKQ7Z6M1 372 aa10.23□□□□□ -0.77
VDR-208ENST00000550325 KLHDC1Q8N7A1 406 aa10.23□□□□□ -0.77
VDR-208ENST00000550325 TCTEX1D1Q8N7M0 179 aa10.23□□□□□ -0.77
VDR-208ENST00000550325 IGHV1OR21-1A0A087WYE8 117 aa10.22□□□□□ -0.77
VDR-208ENST00000550325 MGST1P10620 155 aaKnown RBP10.22□□□□□ -0.77
VDR-208ENST00000550325 TIMP3P35625 211 aa10.22□□□□□ -0.77
VDR-208ENST00000550325 CFHR1Q03591 330 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms