RNA–Protein interactions for RNA: ENST00000550267.1

VPS29-208, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 810 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-208ENST00000550267 HMGN3Q15651 99 aa7.86□□□□□ -1.15
VPS29-208ENST00000550267 DEFB114Q30KQ6 69 aa7.86□□□□□ -1.15
VPS29-208ENST00000550267 DNAL1Q4LDG9 190 aa7.86□□□□□ -1.15
VPS29-208ENST00000550267 DRAXINQ8NBI3 349 aaPredicted RBP7.86□□□□□ -1.15
VPS29-208ENST00000550267 OR13C5Q8NGS8 318 aa7.86□□□□□ -1.15
VPS29-208ENST00000550267 DYNLRB2Q8TF09 96 aa7.86□□□□□ -1.15
VPS29-208ENST00000550267 IL1F10Q8WWZ1 152 aa7.86□□□□□ -1.15
VPS29-208ENST00000550267 TSNAXQ99598 290 aaKnown RBP7.86□□□□□ -1.15
VPS29-208ENST00000550267 RNF5Q99942 180 aa7.86□□□□□ -1.15
VPS29-208ENST00000550267 TMPRSS5Q9H3S3 457 aa7.86□□□□□ -1.15
VPS29-208ENST00000550267 STEAP1Q9UHE8 339 aa7.86□□□□□ -1.15
VPS29-208ENST00000550267 OAZ3Q9UMX2 235 aa7.86□□□□□ -1.15
VPS29-208ENST00000550267 KLK5Q9Y337 293 aaPredicted RBP7.86□□□□□ -1.15
VPS29-208ENST00000550267 SELENOKQ9Y6D0 94 aa7.86□□□□□ -1.15
VPS29-208ENST00000550267 TNCP24821 2201 aa7.85□□□□□ -1.15
VPS29-208ENST00000550267 TRAV8-7A0A075B6U6 113 aa7.85□□□□□ -1.15
VPS29-208ENST00000550267 A0A0B4J203 849 aa7.85□□□□□ -1.15
VPS29-208ENST00000550267 FAM90A7PA6NKC0 464 aa7.85□□□□□ -1.15
VPS29-208ENST00000550267 FAM90A23PA8MXZ1 464 aa7.85□□□□□ -1.15
VPS29-208ENST00000550267 BMPR1BO00238 502 aa7.85□□□□□ -1.15
VPS29-208ENST00000550267 PDCD6O75340 191 aa7.85□□□□□ -1.15
VPS29-208ENST00000550267 IGKV1-16P04430 117 aa7.85□□□□□ -1.15
VPS29-208ENST00000550267 GLAP06280 429 aa7.85□□□□□ -1.15
VPS29-208ENST00000550267 MGMTP16455 207 aa7.85□□□□□ -1.15
VPS29-208ENST00000550267 CPEP16870 476 aa7.85□□□□□ -1.15
VPS29-208ENST00000550267 LINC00205P59089 165 aa7.85□□□□□ -1.15
VPS29-208ENST00000550267 PJVKQ0ZLH3 352 aa7.85□□□□□ -1.15
VPS29-208ENST00000550267 C6orf141Q5SZD1 244 aa7.85□□□□□ -1.15
VPS29-208ENST00000550267 AWAT2Q6E213 333 aa7.85□□□□□ -1.15
VPS29-208ENST00000550267 JAGN1Q8N5M9 183 aa7.85□□□□□ -1.15
VPS29-208ENST00000550267 OR52I1Q8NGK6 324 aa7.85□□□□□ -1.15
VPS29-208ENST00000550267 SNAPC3Q92966 411 aa7.85□□□□□ -1.15
VPS29-208ENST00000550267 OR14A2Q96R54 314 aa7.85□□□□□ -1.15
VPS29-208ENST00000550267 GGTLC1Q9BX51 225 aa7.85□□□□□ -1.15
VPS29-208ENST00000550267 AMBNQ9NP70 447 aa7.85□□□□□ -1.15
VPS29-208ENST00000550267 COA4Q9NYJ1 87 aa7.85□□□□□ -1.15
VPS29-208ENST00000550267 ABRACLQ9P1F3 81 aa7.85□□□□□ -1.15
VPS29-208ENST00000550267 LRRC42Q9Y546 428 aa7.85□□□□□ -1.15
VPS29-208ENST00000550267 AP4S1Q9Y587 144 aa7.85□□□□□ -1.15
VPS29-208ENST00000550267 SNTNA6NMZ2 147 aa7.84□□□□□ -1.15
VPS29-208ENST00000550267 PROP1O75360 226 aa7.84□□□□□ -1.15
VPS29-208ENST00000550267 CRTAPO75718 401 aaPredicted RBP7.84□□□□□ -1.15
VPS29-208ENST00000550267 APELAP0DMC3 54 aa7.84□□□□□ -1.15
VPS29-208ENST00000550267 LGALS7P47929 136 aa7.84□□□□□ -1.15
VPS29-208ENST00000550267 KIR3DS1Q14943 382 aa7.84□□□□□ -1.15
VPS29-208ENST00000550267 ZIK1Q3SY52 487 aaPredicted RBP7.84□□□□□ -1.15
VPS29-208ENST00000550267 LGALS9CQ6DKI2 356 aa7.84□□□□□ -1.15
VPS29-208ENST00000550267 RPL22L1Q6P5R6 122 aaKnown RBP7.84□□□□□ -1.15
VPS29-208ENST00000550267 LYG2Q86SG7 212 aa7.84□□□□□ -1.15
VPS29-208ENST00000550267 ZNF383Q8NA42 475 aa7.84□□□□□ -1.15
VPS29-208ENST00000550267 CCDC197Q8NCU1 140 aa7.84□□□□□ -1.15
VPS29-208ENST00000550267 SLC7A6OSQ96CW6 309 aaPredicted RBP7.84□□□□□ -1.15
VPS29-208ENST00000550267 USMG5Q96IX5 58 aa7.84□□□□□ -1.15
VPS29-208ENST00000550267 SULT4A1Q9BR01 284 aa7.84□□□□□ -1.15
VPS29-208ENST00000550267 ZC4H2Q9NQZ6 224 aa7.84□□□□□ -1.15
VPS29-208ENST00000550267 VPS13DQ5THJ4 4388 aa7.83□□□□□ -1.16
VPS29-208ENST00000550267 LOC102724200A0A096LPH7 203 aaPredicted RBP7.83□□□□□ -1.16
VPS29-208ENST00000550267 LIMS3P0CW19 117 aa7.83□□□□□ -1.16
VPS29-208ENST00000550267 LIMS4P0CW20 117 aa7.83□□□□□ -1.16
VPS29-208ENST00000550267 FOLR2P14207 255 aa7.83□□□□□ -1.16
VPS29-208ENST00000550267 GABRB1P18505 474 aa7.83□□□□□ -1.16
VPS29-208ENST00000550267 KIR2DS2P43631 304 aa7.83□□□□□ -1.16
VPS29-208ENST00000550267 TNFRSF9Q07011 255 aa7.83□□□□□ -1.16
VPS29-208ENST00000550267 EXOSC2Q13868 293 aaKnown RBP7.83□□□□□ -1.16
VPS29-208ENST00000550267 CCDC58Q4VC31 144 aa7.83□□□□□ -1.16
VPS29-208ENST00000550267 PDPNQ86YL7 162 aa7.83□□□□□ -1.16
VPS29-208ENST00000550267 SETD6Q8TBK2 473 aa7.83□□□□□ -1.16
VPS29-208ENST00000550267 FAM46BQ96A09 425 aa7.83□□□□□ -1.16
VPS29-208ENST00000550267 TMEM68Q96MH6 324 aa7.83□□□□□ -1.16
VPS29-208ENST00000550267 AGMATQ9BSE5 352 aa7.83□□□□□ -1.16
VPS29-208ENST00000550267 FAAP24Q9BTP7 215 aa7.83□□□□□ -1.16
VPS29-208ENST00000550267 OR1A1Q9P1Q5 309 aa7.83□□□□□ -1.16
VPS29-208ENST00000550267 TRBV5-5A0A0J9YX44 114 aa7.82□□□□□ -1.16
VPS29-208ENST00000550267 A0A1W2PPK0 400 aa7.82□□□□□ -1.16
VPS29-208ENST00000550267 C2orf70A6NJV1 201 aa7.82□□□□□ -1.16
VPS29-208ENST00000550267 NDUFB8O95169 186 aa7.82□□□□□ -1.16
VPS29-208ENST00000550267 IGLV2-23P01705 113 aa7.82□□□□□ -1.16
VPS29-208ENST00000550267 APOA2P02652 100 aa7.82□□□□□ -1.16
VPS29-208ENST00000550267 PRH1P02810 166 aa7.82□□□□□ -1.16
VPS29-208ENST00000550267 CRYGBP07316 175 aa7.82□□□□□ -1.16
VPS29-208ENST00000550267 FCGR1AP12314 374 aa7.82□□□□□ -1.16
VPS29-208ENST00000550267 OR2G6Q5TZ20 316 aa7.82□□□□□ -1.16
VPS29-208ENST00000550267 SLC16A13Q7RTY0 426 aa7.82□□□□□ -1.16
VPS29-208ENST00000550267 ADAD2Q8NCV1 583 aaKnown RBP7.82□□□□□ -1.16
VPS29-208ENST00000550267 CACNG8Q8WXS5 425 aa7.82□□□□□ -1.16
VPS29-208ENST00000550267 CENPNQ96H22 339 aaPredicted RBP7.82□□□□□ -1.16
VPS29-208ENST00000550267 PHB2Q99623 299 aa7.82□□□□□ -1.16
VPS29-208ENST00000550267 C11orf54Q9H0W9 315 aaPredicted RBP7.82□□□□□ -1.16
VPS29-208ENST00000550267 AKIP1Q9NQ31 210 aa7.82□□□□□ -1.16
VPS29-208ENST00000550267 CKLFQ9UBR5 152 aa7.82□□□□□ -1.16
VPS29-208ENST00000550267 ZNF230Q9UIE0 474 aaPredicted RBP7.82□□□□□ -1.16
VPS29-208ENST00000550267 MSGN1A6NI15 193 aa7.81□□□□□ -1.16
VPS29-208ENST00000550267 ITGB1BP1O14713 200 aa7.81□□□□□ -1.16
VPS29-208ENST00000550267 OGG1O15527 345 aa7.81□□□□□ -1.16
VPS29-208ENST00000550267 LALBAP00709 142 aa7.81□□□□□ -1.16
VPS29-208ENST00000550267 HLA-AP01891 365 aaKnown RBP7.81□□□□□ -1.16
VPS29-208ENST00000550267 ALPLP05186 524 aa7.81□□□□□ -1.16
VPS29-208ENST00000550267 OR9G9P0C7N8 305 aa7.81□□□□□ -1.16
VPS29-208ENST00000550267 VAMP1P23763 118 aa7.81□□□□□ -1.16
VPS29-208ENST00000550267 CEACAM6P40199 344 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms