RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 PI3P19957 117 aa16.99■□□□□ 0.31
VPS29-206ENST00000549578 CD1BP29016 333 aa16.99■□□□□ 0.31
VPS29-206ENST00000549578 RPL30P62888 115 aaKnown RBP16.99■□□□□ 0.31
VPS29-206ENST00000549578 IFITM3Q01628 133 aa16.99■□□□□ 0.31
VPS29-206ENST00000549578 HES1Q14469 280 aa16.99■□□□□ 0.31
VPS29-206ENST00000549578 PHLDA2Q53GA4 152 aa16.99■□□□□ 0.31
VPS29-206ENST00000549578 CCBE1Q6UXH8 406 aaPredicted RBP16.99■□□□□ 0.31
VPS29-206ENST00000549578 TMEM219Q86XT9 240 aa16.99■□□□□ 0.31
VPS29-206ENST00000549578 SLC38A6Q8IZM9 456 aa16.99■□□□□ 0.31
VPS29-206ENST00000549578 TMEM86BQ8N661 226 aa16.99■□□□□ 0.31
VPS29-206ENST00000549578 OR5AN1Q8NGI8 311 aa16.99■□□□□ 0.31
VPS29-206ENST00000549578 AKR1E2Q96JD6 320 aa16.99■□□□□ 0.31
VPS29-206ENST00000549578 JMJD8Q96S16 334 aa16.99■□□□□ 0.31
VPS29-206ENST00000549578 RSRP1Q9BUV0 290 aa16.99■□□□□ 0.31
VPS29-206ENST00000549578 A0A0A6YYJ9 748 aa16.98■□□□□ 0.31
VPS29-206ENST00000549578 GPR31O00270 319 aa16.98■□□□□ 0.31
VPS29-206ENST00000549578 FAM106CPP0CH98 169 aa16.98■□□□□ 0.31
VPS29-206ENST00000549578 THBS3P49746 956 aa16.98■□□□□ 0.31
VPS29-206ENST00000549578 HNF4GQ14541 408 aa16.98■□□□□ 0.31
VPS29-206ENST00000549578 LPCAT3Q6P1A2 487 aa16.98■□□□□ 0.31
VPS29-206ENST00000549578 ZBTB34Q8NCN2 500 aa16.98■□□□□ 0.31
VPS29-206ENST00000549578 BVESQ8NE79 360 aa16.98■□□□□ 0.31
VPS29-206ENST00000549578 A6NDX4 124 aa16.97■□□□□ 0.31
VPS29-206ENST00000549578 UBA52P62987 128 aaKnown RBP16.97■□□□□ 0.31
VPS29-206ENST00000549578 KCTD9Q7L273 389 aa16.97■□□□□ 0.31
VPS29-206ENST00000549578 TCTEX1D2Q8WW35 142 aa16.97■□□□□ 0.31
VPS29-206ENST00000549578 DDB2Q92466 427 aa16.97■□□□□ 0.31
VPS29-206ENST00000549578 BORCS5Q969J3 196 aa16.97■□□□□ 0.31
VPS29-206ENST00000549578 HSD17B10Q99714 261 aaKnown RBP16.97■□□□□ 0.31
VPS29-206ENST00000549578 NAP1L6A6NFF2 107 aa16.96■□□□□ 0.31
VPS29-206ENST00000549578 CENPXA8MT69 81 aa16.96■□□□□ 0.31
VPS29-206ENST00000549578 CLDN34H7C241 214 aa16.96■□□□□ 0.31
VPS29-206ENST00000549578 H7C2Y5 167 aa16.96■□□□□ 0.31
VPS29-206ENST00000549578 CCR6P51684 374 aa16.96■□□□□ 0.31
VPS29-206ENST00000549578 OR2B11Q5JQS5 317 aa16.96■□□□□ 0.31
VPS29-206ENST00000549578 ZNF66Q6ZN08 573 aa16.96■□□□□ 0.31
VPS29-206ENST00000549578 PRIMA1Q86XR5 153 aa16.96■□□□□ 0.31
VPS29-206ENST00000549578 THNSL2Q86YJ6 484 aa16.96■□□□□ 0.31
VPS29-206ENST00000549578 CMTM1Q8IZ96 169 aa16.96■□□□□ 0.31
VPS29-206ENST00000549578 ADTRPQ96IZ2 230 aa16.96■□□□□ 0.31
VPS29-206ENST00000549578 EAF1Q96JC9 268 aaPredicted RBP16.96■□□□□ 0.31
VPS29-206ENST00000549578 C7orf50Q9BRJ6 194 aaKnown RBP16.96■□□□□ 0.31
VPS29-206ENST00000549578 SLC35D1Q9NTN3 355 aa16.96■□□□□ 0.31
VPS29-206ENST00000549578 TBC1D24Q9ULP9 559 aa16.96■□□□□ 0.31
VPS29-206ENST00000549578 WASHC3Q9Y3C0 194 aa16.96■□□□□ 0.31
VPS29-206ENST00000549578 LYRM1O43325 122 aa16.96■□□□□ 0.3
VPS29-206ENST00000549578 CHST1O43916 411 aa16.96■□□□□ 0.3
VPS29-206ENST00000549578 PGLYRP1O75594 196 aaPredicted RBP16.96■□□□□ 0.3
VPS29-206ENST00000549578 MOSP00540 346 aa16.96■□□□□ 0.3
VPS29-206ENST00000549578 APOA2P02652 100 aa16.96■□□□□ 0.3
VPS29-206ENST00000549578 RLN1P04808 185 aa16.96■□□□□ 0.3
VPS29-206ENST00000549578 TMEM11P17152 192 aa16.96■□□□□ 0.3
VPS29-206ENST00000549578 MC5RP33032 325 aa16.96■□□□□ 0.3
VPS29-206ENST00000549578 BTCP35070 178 aa16.96■□□□□ 0.3
VPS29-206ENST00000549578 EBI3Q14213 229 aa16.96■□□□□ 0.3
VPS29-206ENST00000549578 OR2T10Q8NGZ9 312 aa16.96■□□□□ 0.3
VPS29-206ENST00000549578 OR51H1Q8NH63 302 aa16.96■□□□□ 0.3
VPS29-206ENST00000549578 SLC2A9Q9NRM0 540 aa16.96■□□□□ 0.3
VPS29-206ENST00000549578 PITPNC1Q9UKF7 332 aa16.96■□□□□ 0.3
VPS29-206ENST00000549578 GPR137BO60478 399 aa16.95■□□□□ 0.3
VPS29-206ENST00000549578 IGKV1-16P04430 117 aa16.95■□□□□ 0.3
VPS29-206ENST00000549578 RNASE1P07998 156 aaKnown RBP16.95■□□□□ 0.3
VPS29-206ENST00000549578 ECI1P42126 302 aa16.95■□□□□ 0.3
VPS29-206ENST00000549578 ABCA11PQ4W5N1 156 aa16.95■□□□□ 0.3
VPS29-206ENST00000549578 ZFAND1Q8TCF1 268 aa16.95■□□□□ 0.3
VPS29-206ENST00000549578 RITA1Q96K30 269 aa16.95■□□□□ 0.3
VPS29-206ENST00000549578 VSIG4Q9Y279 399 aa16.95■□□□□ 0.3
VPS29-206ENST00000549578 FCGR3BO75015 233 aa16.94■□□□□ 0.3
VPS29-206ENST00000549578 CTSDP07339 412 aaPredicted RBP16.94■□□□□ 0.3
VPS29-206ENST00000549578 PIGPP57054 158 aa16.94■□□□□ 0.3
VPS29-206ENST00000549578 SURF2Q15527 256 aaPredicted RBP16.94■□□□□ 0.3
VPS29-206ENST00000549578 PDPNQ86YL7 162 aa16.94■□□□□ 0.3
VPS29-206ENST00000549578 Q8N6K4 173 aa16.94■□□□□ 0.3
VPS29-206ENST00000549578 ZNF486Q96H40 463 aaPredicted RBP16.94■□□□□ 0.3
VPS29-206ENST00000549578 RTBDNQ9BSG5 229 aaPredicted RBP16.94■□□□□ 0.3
VPS29-206ENST00000549578 GPR132Q9UNW8 380 aa16.94■□□□□ 0.3
VPS29-206ENST00000549578 PRELID3BQ9Y3B1 194 aa16.94■□□□□ 0.3
VPS29-206ENST00000549578 BRWD1-AS2P59051 145 aa16.93■□□□□ 0.3
VPS29-206ENST00000549578 CATR1Q13166 79 aa16.93■□□□□ 0.3
VPS29-206ENST00000549578 RTL8BQ17RB0 113 aa16.93■□□□□ 0.3
VPS29-206ENST00000549578 C16orf87Q6PH81 154 aa16.93■□□□□ 0.3
VPS29-206ENST00000549578 TBC1D26Q86UD7 250 aa16.93■□□□□ 0.3
VPS29-206ENST00000549578 RBM14Q96PK6 669 aaKnown RBP16.93■□□□□ 0.3
VPS29-206ENST00000549578 SLC25A33Q9BSK2 321 aa16.93■□□□□ 0.3
VPS29-206ENST00000549578 C5orf66Q9H5L9 145 aa16.93■□□□□ 0.3
VPS29-206ENST00000549578 C14orf166Q9Y224 244 aaKnown RBP16.93■□□□□ 0.3
VPS29-206ENST00000549578 PEX14O75381 377 aa16.92■□□□□ 0.3
VPS29-206ENST00000549578 OR2F2O95006 317 aa16.92■□□□□ 0.3
VPS29-206ENST00000549578 S100GP29377 79 aa16.92■□□□□ 0.3
VPS29-206ENST00000549578 TAGLNQ01995 201 aaKnown RBP16.92■□□□□ 0.3
VPS29-206ENST00000549578 ASAH1Q13510 395 aa16.92■□□□□ 0.3
VPS29-206ENST00000549578 FAM181BA6NEQ2 426 aa16.91■□□□□ 0.3
VPS29-206ENST00000549578 TRIM77I1YAP6 450 aa16.91■□□□□ 0.3
VPS29-206ENST00000549578 CRYZL1O95825 349 aa16.91■□□□□ 0.3
VPS29-206ENST00000549578 CNTFRP26992 372 aa16.91■□□□□ 0.3
VPS29-206ENST00000549578 F2RL1P55085 397 aa16.91■□□□□ 0.3
VPS29-206ENST00000549578 RND3P61587 244 aa16.91■□□□□ 0.3
VPS29-206ENST00000549578 RBMS2Q15434 407 aaKnown RBP16.91■□□□□ 0.3
VPS29-206ENST00000549578 LIAT1Q6ZQX7 453 aa16.91■□□□□ 0.3
VPS29-206ENST00000549578 FLYWCH2Q96CP2 140 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms