RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 ATP6V0CP27449 155 aa8.24□□□□□ -1.09
RAB5B-206ENST00000549505 APOBEC3AP31941 199 aaPredicted RBP8.24□□□□□ -1.09
RAB5B-206ENST00000549505 ZNF134P52741 427 aa8.24□□□□□ -1.09
RAB5B-206ENST00000549505 DLX6P56179 175 aa8.24□□□□□ -1.09
RAB5B-206ENST00000549505 MRPS11P82912 194 aaKnown RBP8.24□□□□□ -1.09
RAB5B-206ENST00000549505 SERF2P84101 59 aa8.24□□□□□ -1.09
RAB5B-206ENST00000549505 STX12Q86Y82 276 aa8.24□□□□□ -1.09
RAB5B-206ENST00000549505 OR10G4Q8NGN3 311 aa8.24□□□□□ -1.09
RAB5B-206ENST00000549505 GSN-AS1Q9NRJ2 163 aa8.24□□□□□ -1.09
RAB5B-206ENST00000549505 C19orf12Q9NSK7 152 aa8.24□□□□□ -1.09
RAB5B-206ENST00000549505 KCNS2Q9ULS6 477 aa8.24□□□□□ -1.09
RAB5B-206ENST00000549505 INTS1Q8N201 2190 aaKnown RBP8.23□□□□□ -1.09
RAB5B-206ENST00000549505 TRGV10A0A0A0MS01 117 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 E7EQL1 145 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 ST8SIA5O15466 376 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 FAM87AP0C7U9 286 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 CD80P33681 288 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 THBS3P49746 956 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 PPOXP50336 477 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 TMEM249Q2WGJ8 235 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 MBD3L1Q8WWY6 194 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 GGACTQ9BVM4 153 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 RBKSQ9H477 322 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 BSNQ9UPA5 3926 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 FNDC10F2Z333 226 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 FCN3O75636 299 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 S1PR2O95136 353 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 RBP4P02753 201 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 HOXA4Q00056 320 aaPredicted RBP8.23□□□□□ -1.09
RAB5B-206ENST00000549505 TFF3Q07654 80 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 DHRS7BQ6IAN0 325 aaPredicted RBP8.23□□□□□ -1.09
RAB5B-206ENST00000549505 SPSB3Q6PJ21 355 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 Q6ZRG5 221 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 ZNF833PQ6ZTB9 187 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 CLRN3Q8NCR9 226 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 ZNRF1Q8ND25 227 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 OR5C1Q8NGR4 320 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 MS4A5Q9H3V2 200 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 KCNJ16Q9NPI9 418 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 RAXQ9Y2V3 346 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 RAI1Q7Z5J4 1906 aaPredicted RBP8.23□□□□□ -1.09
RAB5B-206ENST00000549505 GTF3C1Q12789 2109 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 AKAP13Q12802 2813 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 DSCAML1Q8TD84 2053 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 NKX6-3A6NJ46 265 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 RNASEK-C17orf49H0YIS7 233 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 EPHA1P21709 976 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 AKR1C2P52895 323 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 ATP5IP56385 69 aaPredicted RBP8.23□□□□□ -1.09
RAB5B-206ENST00000549505 HBG1P69891 147 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 HBG2P69892 147 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 AKR1C1Q04828 323 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 CT45A1Q5HYN5 189 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 CT45A3Q8NHU0 189 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 PSENENQ9NZ42 101 aa8.23□□□□□ -1.09
RAB5B-206ENST00000549505 IGHV3OR15-7A0A075B7D8 119 aa8.22□□□□□ -1.09
RAB5B-206ENST00000549505 hADV38S2A0JD32 116 aa8.22□□□□□ -1.09
RAB5B-206ENST00000549505 DNASE2O00115 360 aaPredicted RBP8.22□□□□□ -1.09
RAB5B-206ENST00000549505 TFF1P04155 84 aa8.22□□□□□ -1.09
RAB5B-206ENST00000549505 IRF2P14316 349 aa8.22□□□□□ -1.09
RAB5B-206ENST00000549505 GPR12P47775 334 aa8.22□□□□□ -1.09
RAB5B-206ENST00000549505 NCR3LG1Q68D85 454 aa8.22□□□□□ -1.09
RAB5B-206ENST00000549505 HEPN1Q6WQI6 88 aa8.22□□□□□ -1.09
RAB5B-206ENST00000549505 WFDC8Q8IUA0 241 aa8.22□□□□□ -1.09
RAB5B-206ENST00000549505 SVBPQ8N300 66 aa8.22□□□□□ -1.09
RAB5B-206ENST00000549505 DCTN5Q9BTE1 182 aa8.22□□□□□ -1.09
RAB5B-206ENST00000549505 ABHD14AQ9BUJ0 271 aa8.22□□□□□ -1.09
RAB5B-206ENST00000549505 MIOXQ9UGB7 285 aa8.22□□□□□ -1.09
RAB5B-206ENST00000549505 FOXA2Q9Y261 457 aaPredicted RBP8.22□□□□□ -1.09
RAB5B-206ENST00000549505 PRSS46E5RG02 174 aa8.22□□□□□ -1.09
RAB5B-206ENST00000549505 S100A6P06703 90 aa8.22□□□□□ -1.09
RAB5B-206ENST00000549505 AGAP20933 346 aa8.22□□□□□ -1.09
RAB5B-206ENST00000549505 VDAC2P45880 294 aaPredicted RBP8.22□□□□□ -1.09
RAB5B-206ENST00000549505 SRSF3P84103 164 aaKnown RBP8.22□□□□□ -1.09
RAB5B-206ENST00000549505 C8orf46Q8TAG6 207 aa8.22□□□□□ -1.09
RAB5B-206ENST00000549505 SH3BGRL3Q9H299 93 aa8.22□□□□□ -1.09
RAB5B-206ENST00000549505 TMEM106BQ9NUM4 274 aa8.22□□□□□ -1.09
RAB5B-206ENST00000549505 PSG11Q9UQ72 335 aa8.22□□□□□ -1.09
RAB5B-206ENST00000549505 WRBO00258 174 aa8.21□□□□□ -1.09
RAB5B-206ENST00000549505 GPR37O15354 613 aa8.21□□□□□ -1.09
RAB5B-206ENST00000549505 EIF3GO75821 320 aaKnown RBP eCLIP8.21□□□□□ -1.09
RAB5B-206ENST00000549505 CYB5R3P00387 301 aaPredicted RBP8.21□□□□□ -1.09
RAB5B-206ENST00000549505 DAOP14920 347 aa8.21□□□□□ -1.09
RAB5B-206ENST00000549505 SPCS3P61009 180 aa8.21□□□□□ -1.09
RAB5B-206ENST00000549505 ADORA2A-AS1P86434 159 aa8.21□□□□□ -1.09
RAB5B-206ENST00000549505 ARL16Q0P5N6 197 aa8.21□□□□□ -1.09
RAB5B-206ENST00000549505 FAM53AQ6NSI3 398 aaPredicted RBP8.21□□□□□ -1.09
RAB5B-206ENST00000549505 PRR18Q8N4B5 295 aa8.21□□□□□ -1.09
RAB5B-206ENST00000549505 TCTEX1D2Q8WW35 142 aa8.21□□□□□ -1.09
RAB5B-206ENST00000549505 MAGT1Q9H0U3 335 aa8.21□□□□□ -1.09
RAB5B-206ENST00000549505 IGHV3-64DA0A0J9YX35 117 aa8.21□□□□□ -1.1
RAB5B-206ENST00000549505 MARCH11A6NNE9 402 aa8.21□□□□□ -1.1
RAB5B-206ENST00000549505 RELBQ01201 579 aa8.21□□□□□ -1.1
RAB5B-206ENST00000549505 C1orf229Q6ZS94 237 aaPredicted RBP8.21□□□□□ -1.1
RAB5B-206ENST00000549505 RHOVQ96L33 236 aa8.21□□□□□ -1.1
RAB5B-206ENST00000549505 SMIM3Q9BZL3 60 aa8.21□□□□□ -1.1
RAB5B-206ENST00000549505 WDR61Q9GZS3 305 aaKnown RBP8.21□□□□□ -1.1
RAB5B-206ENST00000549505 GAL3ST2Q9H3Q3 398 aa8.21□□□□□ -1.1
RAB5B-206ENST00000549505 KIAA1456Q9P272 454 aa8.21□□□□□ -1.1
RAB5B-206ENST00000549505 ZNF257Q9Y2Q1 563 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms