RNA–Protein interactions for RNA: ENST00000549341.1

DEPDC4-208, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-208ENST00000549341 TAS2R3Q9NYW6 316 aa5.83□□□□□ -1.48
DEPDC4-208ENST00000549341 GNG12Q9UBI6 72 aa5.83□□□□□ -1.48
DEPDC4-208ENST00000549341 SLC25A10Q9UBX3 287 aaPredicted RBP5.83□□□□□ -1.48
DEPDC4-208ENST00000549341 ARFGEF3Q5TH69 2177 aa5.83□□□□□ -1.48
DEPDC4-208ENST00000549341 TRBV23-1A0A0A0MS06 115 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 C3orf85A0A1B0GTC6 90 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 C13orf42A0A1B0GVH6 325 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 hCG_1809904A0A1W2PP81 198 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 A0A1W2PPE2 198 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 A0A1W2PR64 198 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 A0A1W2PRV1 198 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 H0Y980 276 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 J3QLI3 93 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 ITGB1BP1O14713 200 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 HSD17B6O14756 317 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 YPEL1O60688 119 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 SERPINE2P07093 398 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 CXCL3P19876 107 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 COL8A2P25067 703 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 GNRHRP30968 328 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 GLIPR1P48060 266 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 LCN2P80188 198 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 THOC7Q6I9Y2 204 aaKnown RBP5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 Q6ZPA2 131 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 LCNL1Q6ZST4 164 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 TBC1D26Q86UD7 250 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 BCL6BQ8N143 479 aaPredicted RBP5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 ZNF645Q8N7E2 425 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 ZNRF1Q8ND25 227 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 BVESQ8NE79 360 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 OR52M1Q8NGK5 317 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 RNASE11Q8TAA1 199 aaKnown RBP5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 FAM110DQ8TAY7 271 aaPredicted RBP5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 CORO2AQ92828 525 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 IL22RA2Q969J5 263 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 TMEM230Q96A57 120 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 C2orf50Q96LR7 162 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 GAFA1Q96PS6 74 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 YPEL2Q96QA6 119 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 NMES1Q9C002 83 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 TOLLIPQ9H0E2 274 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 TNFRSF19Q9NS68 423 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 CALYQ9NYX4 217 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 KAAG1Q9UBP8 84 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 MIOXQ9UGB7 285 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 TMED3Q9Y3Q3 217 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 MAB21L2Q9Y586 359 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 LINC00312Q9Y6C7 94 aa5.82□□□□□ -1.48
DEPDC4-208ENST00000549341 IGHV3OR16-10A0A075B7F0 116 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 IGKV1-6A0A0C4DH72 117 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 KBTBD11-OT1A0A1B0GTJ5 212 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 HMSDA8MTL9 139 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 F2RL2O00254 374 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 TIMM23O14925 209 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 FSHBP01225 129 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 HOXB5P09067 269 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 WNT2P09544 360 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 OR5AC1P0C628 307 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 OR8U9P0C7N5 309 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 RPA2P15927 270 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 TMEM33P57088 247 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 RPL31P62899 125 aaKnown RBP5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 CD300CQ08708 224 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 HERPUD1Q15011 391 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 MLANAQ16655 118 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 Q3ZCU0 254 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 TMEM155Q4W5P6 130 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 SPRNQ5BIV9 151 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 LY6G6FQ5SQ64 297 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 FAM201AQ5SY85 155 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 ZNF66Q6ZN08 573 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 KIR3DL3Q8N743 410 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 LRTM2Q8N967 370 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 INO80EQ8NBZ0 244 aaPredicted RBP5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 OR8B3Q8NGG8 313 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 OR13A1Q8NGR1 328 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 OR8U1Q8NH10 309 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 OR1L1Q8NH94 360 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 CD300LFQ8TDQ1 290 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 H1FXQ92522 213 aaKnown RBP5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 OR8B2Q96RD0 313 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 HSD17B10Q99714 261 aaKnown RBP5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 SLA2Q9H6Q3 261 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 CCL28Q9NRJ3 127 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 FAM212BQ9NTI7 297 aaPredicted RBP5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 IDI2-AS1Q9NZ38 188 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 OR1A1Q9P1Q5 309 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 CLN8Q9UBY8 286 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 RYR2Q92736 4967 aa5.81□□□□□ -1.48
DEPDC4-208ENST00000549341 FXYD6-FXYD2A0A087WZ82 144 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 TRAV39A0A0B4J263 110 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 A0A0D9SG52 128 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 G3V4G9 280 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 C15orf65H3BRN8 121 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 L7N2F9 121 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 PGLYRP1O75594 196 aaPredicted RBP5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 RP2O75695 350 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 ZNF205O95201 554 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 SIX6O95475 246 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 SLC25A4P12235 298 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms