RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 DCTN2Q13561 401 aaKnown RBP9.72□□□□□ -0.85
HDAC7-226ENST00000547259 SSX2Q16385 188 aa9.72□□□□□ -0.85
HDAC7-226ENST00000547259 FAM71F2Q6NXP2 309 aa9.72□□□□□ -0.85
HDAC7-226ENST00000547259 LPCAT3Q6P1A2 487 aa9.72□□□□□ -0.85
HDAC7-226ENST00000547259 TGIF2LXQ8IUE1 241 aa9.72□□□□□ -0.85
HDAC7-226ENST00000547259 ODF3L1Q8IXM7 274 aa9.72□□□□□ -0.85
HDAC7-226ENST00000547259 SLC38A6Q8IZM9 456 aa9.72□□□□□ -0.85
HDAC7-226ENST00000547259 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.72□□□□□ -0.85
HDAC7-226ENST00000547259 OR13C8Q8NGS7 320 aa9.72□□□□□ -0.85
HDAC7-226ENST00000547259 MARCH1Q8TCQ1 289 aa9.72□□□□□ -0.85
HDAC7-226ENST00000547259 SDHAF2Q9NX18 166 aa9.72□□□□□ -0.85
HDAC7-226ENST00000547259 HILPDAQ9Y5L2 63 aa9.72□□□□□ -0.85
HDAC7-226ENST00000547259 SOX21Q9Y651 276 aaPredicted RBP9.72□□□□□ -0.85
HDAC7-226ENST00000547259 OOSP1A8MZH6 123 aa9.71□□□□□ -0.86
HDAC7-226ENST00000547259 LY6LH3BQJ8 138 aa9.71□□□□□ -0.86
HDAC7-226ENST00000547259 M0R1X1 148 aa9.71□□□□□ -0.86
HDAC7-226ENST00000547259 TXNL1O43396 289 aa9.71□□□□□ -0.86
HDAC7-226ENST00000547259 GPR137BO60478 399 aa9.71□□□□□ -0.86
HDAC7-226ENST00000547259 GAPDHP04406 335 aaKnown RBP9.71□□□□□ -0.86
HDAC7-226ENST00000547259 FBP1P09467 338 aa9.71□□□□□ -0.86
HDAC7-226ENST00000547259 BTCP35070 178 aa9.71□□□□□ -0.86
HDAC7-226ENST00000547259 ARHGDIBP52566 201 aa9.71□□□□□ -0.86
HDAC7-226ENST00000547259 UCP3P55916 312 aa9.71□□□□□ -0.86
HDAC7-226ENST00000547259 RELBQ01201 579 aa9.71□□□□□ -0.86
HDAC7-226ENST00000547259 ZNF816Q0VGE8 651 aaPredicted RBP9.71□□□□□ -0.86
HDAC7-226ENST00000547259 DIAPH2-AS1Q14236 149 aa9.71□□□□□ -0.86
HDAC7-226ENST00000547259 RBMS2Q15434 407 aaKnown RBP9.71□□□□□ -0.86
HDAC7-226ENST00000547259 C2orf68Q2NKX9 166 aa9.71□□□□□ -0.86
HDAC7-226ENST00000547259 ABCA11PQ4W5N1 156 aa9.71□□□□□ -0.86
HDAC7-226ENST00000547259 PLA1AQ53H76 456 aa9.71□□□□□ -0.86
HDAC7-226ENST00000547259 LDLRAD2Q5SZI1 272 aa9.71□□□□□ -0.86
HDAC7-226ENST00000547259 ZNF818PQ6ZRF7 136 aa9.71□□□□□ -0.86
HDAC7-226ENST00000547259 ZNF833PQ6ZTB9 187 aa9.71□□□□□ -0.86
HDAC7-226ENST00000547259 DRAM1Q8N682 238 aa9.71□□□□□ -0.86
HDAC7-226ENST00000547259 POC5Q8NA72 575 aa9.71□□□□□ -0.86
HDAC7-226ENST00000547259 LINC01006Q8NI28 216 aa9.71□□□□□ -0.86
HDAC7-226ENST00000547259 C17orf50Q8WW18 174 aa9.71□□□□□ -0.86
HDAC7-226ENST00000547259 RTN4IP1Q8WWV3 396 aaPredicted RBP9.71□□□□□ -0.86
HDAC7-226ENST00000547259 ST6GALNAC6Q969X2 333 aa9.71□□□□□ -0.86
HDAC7-226ENST00000547259 MALSU1Q96EH3 234 aa9.71□□□□□ -0.86
HDAC7-226ENST00000547259 C5orf30Q96GV9 206 aa9.71□□□□□ -0.86
HDAC7-226ENST00000547259 AKR1E2Q96JD6 320 aa9.71□□□□□ -0.86
HDAC7-226ENST00000547259 SCGB3A2Q96PL1 93 aa9.71□□□□□ -0.86
HDAC7-226ENST00000547259 GAB2Q9UQC2 676 aa9.71□□□□□ -0.86
HDAC7-226ENST00000547259 C14orf166Q9Y224 244 aaKnown RBP9.71□□□□□ -0.86
HDAC7-226ENST00000547259 FAM240BA0A1B0GVZ2 78 aa9.7□□□□□ -0.86
HDAC7-226ENST00000547259 GPR31O00270 319 aa9.7□□□□□ -0.86
HDAC7-226ENST00000547259 TNFSF12O43508 249 aa9.7□□□□□ -0.86
HDAC7-226ENST00000547259 PAX6P26367 422 aa9.7□□□□□ -0.86
HDAC7-226ENST00000547259 S100GP29377 79 aa9.7□□□□□ -0.86
HDAC7-226ENST00000547259 IER3P46695 156 aa9.7□□□□□ -0.86
HDAC7-226ENST00000547259 PROK1P58294 105 aa9.7□□□□□ -0.86
HDAC7-226ENST00000547259 SRSF4Q08170 494 aaKnown RBP9.7□□□□□ -0.86
HDAC7-226ENST00000547259 SURF2Q15527 256 aaPredicted RBP9.7□□□□□ -0.86
HDAC7-226ENST00000547259 MSMO1Q15800 293 aa9.7□□□□□ -0.86
HDAC7-226ENST00000547259 CCDC144NLQ6NUI1 221 aa9.7□□□□□ -0.86
HDAC7-226ENST00000547259 MOB3BQ86TA1 216 aa9.7□□□□□ -0.86
HDAC7-226ENST00000547259 CMTM1Q8IZ96 169 aa9.7□□□□□ -0.86
HDAC7-226ENST00000547259 OR8H3Q8N146 312 aa9.7□□□□□ -0.86
HDAC7-226ENST00000547259 DYNAPQ8N1N2 210 aa9.7□□□□□ -0.86
HDAC7-226ENST00000547259 ZBTB34Q8NCN2 500 aa9.7□□□□□ -0.86
HDAC7-226ENST00000547259 ENKURQ8TC29 256 aa9.7□□□□□ -0.86
HDAC7-226ENST00000547259 ZFAND1Q8TCF1 268 aa9.7□□□□□ -0.86
HDAC7-226ENST00000547259 TAF15Q92804 592 aaKnown RBP eCLIP9.7□□□□□ -0.86
HDAC7-226ENST00000547259 MRGPRFQ96AM1 343 aa9.7□□□□□ -0.86
HDAC7-226ENST00000547259 ZNF486Q96H40 463 aaPredicted RBP9.7□□□□□ -0.86
HDAC7-226ENST00000547259 ZNF251Q9BRH9 671 aa9.7□□□□□ -0.86
HDAC7-226ENST00000547259 RSRP1Q9BUV0 290 aa9.7□□□□□ -0.86
HDAC7-226ENST00000547259 MRPL20Q9BYC9 149 aaKnown RBP9.7□□□□□ -0.86
HDAC7-226ENST00000547259 C16orf95Q9H693 158 aa9.7□□□□□ -0.86
HDAC7-226ENST00000547259 TET2Q6N021 2002 aaPredicted RBP9.7□□□□□ -0.86
HDAC7-226ENST00000547259 IGHV1-3A0A0C4DH29 117 aa9.69□□□□□ -0.86
HDAC7-226ENST00000547259 A0A1W2PPI3 338 aa9.69□□□□□ -0.86
HDAC7-226ENST00000547259 NDUFB6O95139 128 aa9.69□□□□□ -0.86
HDAC7-226ENST00000547259 IGLV2-14P01704 120 aa9.69□□□□□ -0.86
HDAC7-226ENST00000547259 CTSDP07339 412 aaPredicted RBP9.69□□□□□ -0.86
HDAC7-226ENST00000547259 PI3P19957 117 aa9.69□□□□□ -0.86
HDAC7-226ENST00000547259 GNRHRP30968 328 aa9.69□□□□□ -0.86
HDAC7-226ENST00000547259 THBS3P49746 956 aa9.69□□□□□ -0.86
HDAC7-226ENST00000547259 CATR1Q13166 79 aa9.69□□□□□ -0.86
HDAC7-226ENST00000547259 PHLDA2Q53GA4 152 aa9.69□□□□□ -0.86
HDAC7-226ENST00000547259 DHRS7BQ6IAN0 325 aaPredicted RBP9.69□□□□□ -0.86
HDAC7-226ENST00000547259 C11orf88Q6PI97 169 aa9.69□□□□□ -0.86
HDAC7-226ENST00000547259 CCDC71LQ8N9Z2 235 aa9.69□□□□□ -0.86
HDAC7-226ENST00000547259 BVESQ8NE79 360 aa9.69□□□□□ -0.86
HDAC7-226ENST00000547259 AJUBAQ96IF1 538 aa9.69□□□□□ -0.86
HDAC7-226ENST00000547259 SLC25A21Q9BQT8 299 aaPredicted RBP9.69□□□□□ -0.86
HDAC7-226ENST00000547259 NOTCH3Q9UM47 2321 aa9.69□□□□□ -0.86
HDAC7-226ENST00000547259 PROP1O75360 226 aa9.68□□□□□ -0.86
HDAC7-226ENST00000547259 TSPAN9O75954 239 aa9.68□□□□□ -0.86
HDAC7-226ENST00000547259 RLN1P04808 185 aa9.68□□□□□ -0.86
HDAC7-226ENST00000547259 SLC6A1P30531 599 aa9.68□□□□□ -0.86
HDAC7-226ENST00000547259 BRS3P32247 399 aa9.68□□□□□ -0.86
HDAC7-226ENST00000547259 PIGPP57054 158 aa9.68□□□□□ -0.86
HDAC7-226ENST00000547259 GLDNQ6ZMI3 551 aaPredicted RBP9.68□□□□□ -0.86
HDAC7-226ENST00000547259 ZNF66Q6ZN08 573 aa9.68□□□□□ -0.86
HDAC7-226ENST00000547259 KCTD9Q7L273 389 aa9.68□□□□□ -0.86
HDAC7-226ENST00000547259 TMED4Q7Z7H5 227 aa9.68□□□□□ -0.86
HDAC7-226ENST00000547259 DRAXINQ8NBI3 349 aaPredicted RBP9.68□□□□□ -0.86
HDAC7-226ENST00000547259 OR5R1Q8NH85 324 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms