RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 ZNF695Q8IW36 515 aa12.46□□□□□ -0.41
DDX54-204ENST00000546898 KLHL30-AS1Q8NEE0 82 aa12.46□□□□□ -0.41
DDX54-204ENST00000546898 SLC25A46Q96AG3 418 aa12.46□□□□□ -0.41
DDX54-204ENST00000546898 FLYWCH2Q96CP2 140 aaKnown RBP12.46□□□□□ -0.41
DDX54-204ENST00000546898 KCTD12Q96CX2 325 aaKnown RBP12.46□□□□□ -0.41
DDX54-204ENST00000546898 ADTRPQ96IZ2 230 aa12.46□□□□□ -0.41
DDX54-204ENST00000546898 AUNIPQ9H7T9 357 aa12.46□□□□□ -0.41
DDX54-204ENST00000546898 OR2W1Q9Y3N9 320 aa12.46□□□□□ -0.41
DDX54-204ENST00000546898 TRAV41A0A0B4J266 112 aa12.45□□□□□ -0.42
DDX54-204ENST00000546898 SLC22A5O76082 557 aa12.45□□□□□ -0.42
DDX54-204ENST00000546898 RPLP1P05386 114 aaKnown RBP12.45□□□□□ -0.42
DDX54-204ENST00000546898 SMIM18P0DKX4 95 aa12.45□□□□□ -0.42
DDX54-204ENST00000546898 RRASP10301 218 aa12.45□□□□□ -0.42
DDX54-204ENST00000546898 PSMB8P28062 276 aa12.45□□□□□ -0.42
DDX54-204ENST00000546898 PPIFP30405 207 aaKnown RBP12.45□□□□□ -0.42
DDX54-204ENST00000546898 CDX1P47902 265 aaPredicted RBP12.45□□□□□ -0.42
DDX54-204ENST00000546898 LUMP51884 338 aaPredicted RBP12.45□□□□□ -0.42
DDX54-204ENST00000546898 PSG5Q15238 335 aa12.45□□□□□ -0.42
DDX54-204ENST00000546898 RTL8BQ17RB0 113 aa12.45□□□□□ -0.42
DDX54-204ENST00000546898 ETV3LQ6ZN32 361 aa12.45□□□□□ -0.42
DDX54-204ENST00000546898 C8orf86Q6ZUL3 223 aa12.45□□□□□ -0.42
DDX54-204ENST00000546898 ZNF645Q8N7E2 425 aa12.45□□□□□ -0.42
DDX54-204ENST00000546898 TCTEX1D1Q8N7M0 179 aa12.45□□□□□ -0.42
DDX54-204ENST00000546898 BEST4Q8NFU0 473 aa12.45□□□□□ -0.42
DDX54-204ENST00000546898 S100A16Q96FQ6 103 aaKnown RBP12.45□□□□□ -0.42
DDX54-204ENST00000546898 C5orf30Q96GV9 206 aa12.45□□□□□ -0.42
DDX54-204ENST00000546898 RCC1LQ96I51 464 aaKnown RBP12.45□□□□□ -0.42
DDX54-204ENST00000546898 METTL1Q9UBP6 276 aaKnown RBP12.45□□□□□ -0.42
DDX54-204ENST00000546898 XRCC3O43542 346 aa12.44□□□□□ -0.42
DDX54-204ENST00000546898 DUS4LO95620 317 aaKnown RBP12.44□□□□□ -0.42
DDX54-204ENST00000546898 HLA-DQB1P01920 261 aa12.44□□□□□ -0.42
DDX54-204ENST00000546898 DUTP33316 252 aaKnown RBP12.44□□□□□ -0.42
DDX54-204ENST00000546898 MYCNOSP40205 109 aa12.44□□□□□ -0.42
DDX54-204ENST00000546898 CBX5P45973 191 aa12.44□□□□□ -0.42
DDX54-204ENST00000546898 LGALS7P47929 136 aa12.44□□□□□ -0.42
DDX54-204ENST00000546898 LINC00205P59089 165 aa12.44□□□□□ -0.42
DDX54-204ENST00000546898 ARPC4P59998 168 aa12.44□□□□□ -0.42
DDX54-204ENST00000546898 CX3CL1P78423 397 aa12.44□□□□□ -0.42
DDX54-204ENST00000546898 NDPQ00604 133 aa12.44□□□□□ -0.42
DDX54-204ENST00000546898 TMEM177Q53S58 311 aa12.44□□□□□ -0.42
DDX54-204ENST00000546898 HOGA1Q86XE5 327 aa12.44□□□□□ -0.42
DDX54-204ENST00000546898 LINC00482Q8N8I6 264 aa12.44□□□□□ -0.42
DDX54-204ENST00000546898 G3V318 75 aa12.43□□□□□ -0.42
DDX54-204ENST00000546898 IGLV1-40P01703 118 aa12.43□□□□□ -0.42
DDX54-204ENST00000546898 NFYAP23511 347 aaPredicted RBP12.43□□□□□ -0.42
DDX54-204ENST00000546898 NCS1P62166 190 aa12.43□□□□□ -0.42
DDX54-204ENST00000546898 OXLD1Q5BKU9 147 aa12.43□□□□□ -0.42
DDX54-204ENST00000546898 C18orf65Q6ZTR6 163 aa12.43□□□□□ -0.42
DDX54-204ENST00000546898 MRPL41Q8IXM3 137 aaKnown RBP12.43□□□□□ -0.42
DDX54-204ENST00000546898 SAMD12Q8N8I0 201 aa12.43□□□□□ -0.42
DDX54-204ENST00000546898 MINDY2Q8NBR6 621 aa12.43□□□□□ -0.42
DDX54-204ENST00000546898 MYOZ3Q8TDC0 251 aa12.43□□□□□ -0.42
DDX54-204ENST00000546898 DDB2Q92466 427 aa12.43□□□□□ -0.42
DDX54-204ENST00000546898 HARBI1Q96MB7 349 aa12.43□□□□□ -0.42
DDX54-204ENST00000546898 P2RX4Q99571 388 aa12.43□□□□□ -0.42
DDX54-204ENST00000546898 WSB1Q9Y6I7 421 aa12.43□□□□□ -0.42
DDX54-204ENST00000546898 SLC25A17O43808 307 aa12.42□□□□□ -0.42
DDX54-204ENST00000546898 TUSC2O75896 110 aa12.42□□□□□ -0.42
DDX54-204ENST00000546898 CA2P00918 260 aa12.42□□□□□ -0.42
DDX54-204ENST00000546898 VBP1P61758 197 aa12.42□□□□□ -0.42
DDX54-204ENST00000546898 TMEM267Q0VDI3 215 aaPredicted RBP12.42□□□□□ -0.42
DDX54-204ENST00000546898 ECSCRQ19T08 205 aa12.42□□□□□ -0.42
DDX54-204ENST00000546898 C19orf54Q5BKX5 351 aa12.42□□□□□ -0.42
DDX54-204ENST00000546898 TMEM69Q5SWH9 247 aa12.42□□□□□ -0.42
DDX54-204ENST00000546898 TMEM65Q6PI78 240 aa12.42□□□□□ -0.42
DDX54-204ENST00000546898 ZNF562Q6V9R5 426 aa12.42□□□□□ -0.42
DDX54-204ENST00000546898 LCNL1Q6ZST4 164 aa12.42□□□□□ -0.42
DDX54-204ENST00000546898 REC114Q7Z4M0 266 aa12.42□□□□□ -0.42
DDX54-204ENST00000546898 GVQW1Q8N7I0 195 aa12.42□□□□□ -0.42
DDX54-204ENST00000546898 BVESQ8NE79 360 aa12.42□□□□□ -0.42
DDX54-204ENST00000546898 ABHD5Q8WTS1 349 aa12.42□□□□□ -0.42
DDX54-204ENST00000546898 C4orf3Q8WVX3 66 aa12.42□□□□□ -0.42
DDX54-204ENST00000546898 CMTM3Q96MX0 182 aa12.42□□□□□ -0.42
DDX54-204ENST00000546898 MRPS26Q9BYN8 205 aaKnown RBP12.42□□□□□ -0.42
DDX54-204ENST00000546898 GPR61Q9BZJ8 451 aa12.42□□□□□ -0.42
DDX54-204ENST00000546898 FBXO7Q9Y3I1 522 aa12.42□□□□□ -0.42
DDX54-204ENST00000546898 LINC00473A8K010 186 aa12.41□□□□□ -0.42
DDX54-204ENST00000546898 FCN1O00602 326 aa12.41□□□□□ -0.42
DDX54-204ENST00000546898 SHOXO15266 292 aa12.41□□□□□ -0.42
DDX54-204ENST00000546898 GABARAPO95166 117 aa12.41□□□□□ -0.42
DDX54-204ENST00000546898 IGLV2-23P01705 113 aa12.41□□□□□ -0.42
DDX54-204ENST00000546898 IGLL1P15814 213 aa12.41□□□□□ -0.42
DDX54-204ENST00000546898 MSMO1Q15800 293 aa12.41□□□□□ -0.42
DDX54-204ENST00000546898 AKIRIN2Q53H80 203 aa12.41□□□□□ -0.42
DDX54-204ENST00000546898 PYHIN1Q6K0P9 492 aa12.41□□□□□ -0.42
DDX54-204ENST00000546898 KCTD9Q7L273 389 aa12.41□□□□□ -0.42
DDX54-204ENST00000546898 PPP1R27Q86WC6 154 aa12.41□□□□□ -0.42
DDX54-204ENST00000546898 ANKRD13BQ86YJ7 626 aa12.41□□□□□ -0.42
DDX54-204ENST00000546898 OSR1Q8TAX0 266 aaPredicted RBP12.41□□□□□ -0.42
DDX54-204ENST00000546898 ACOT12Q8WYK0 555 aa12.41□□□□□ -0.42
DDX54-204ENST00000546898 UBE2E2Q96LR5 201 aa12.41□□□□□ -0.42
DDX54-204ENST00000546898 CLCC1Q96S66 551 aa12.41□□□□□ -0.42
DDX54-204ENST00000546898 NECAP2Q9NVZ3 263 aa12.41□□□□□ -0.42
DDX54-204ENST00000546898 FOXA2Q9Y261 457 aaPredicted RBP12.41□□□□□ -0.42
DDX54-204ENST00000546898 RBMX2Q9Y388 322 aaKnown RBP12.41□□□□□ -0.42
DDX54-204ENST00000546898 NUBP2Q9Y5Y2 271 aa12.41□□□□□ -0.42
DDX54-204ENST00000546898 IGKV1D-13A0A0B4J2D9 117 aa12.4□□□□□ -0.42
DDX54-204ENST00000546898 A0A1W2PN81 502 aa12.4□□□□□ -0.42
DDX54-204ENST00000546898 CRYGBP07316 175 aa12.4□□□□□ -0.42
DDX54-204ENST00000546898 IGKV1-13P0DP09 117 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms