RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 PPIAL4GP0DN37 164 aa8.87□□□□□ -0.99
SOD2-216ENST00000546260 UCP1P25874 307 aa8.87□□□□□ -0.99
SOD2-216ENST00000546260 ARL3P36405 182 aa8.87□□□□□ -0.99
SOD2-216ENST00000546260 CEACAM3P40198 252 aa8.87□□□□□ -0.99
SOD2-216ENST00000546260 SIGLEC12Q96PQ1 595 aa8.87□□□□□ -0.99
SOD2-216ENST00000546260 A0A1W2PS18 150 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 OR5AL1P0C617 328 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 RPL15P61313 204 aaKnown RBP8.86□□□□□ -0.99
SOD2-216ENST00000546260 ID3Q02535 119 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 MESP2Q0VG99 397 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 LTC4SQ16873 150 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 H2BFWTQ7Z2G1 175 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 LRTM2Q8N967 370 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 PLPPR1Q8TBJ4 325 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 ULBP2Q9BZM5 246 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 FAM234AQ9H0X4 552 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 PILRBQ9UKJ0 227 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 FRMPD3Q5JV73 1810 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 F2RP25116 425 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 GNB1P62873 340 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 COX19Q49B96 90 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 SARAFQ96BY9 339 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 Q96M66 194 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 SSBP3Q9BWW4 388 aaPredicted RBP8.86□□□□□ -0.99
SOD2-216ENST00000546260 FBLN5Q9UBX5 448 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 ATG2BQ96BY7 2078 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 PHF3Q92576 2039 aaKnown RBP8.86□□□□□ -0.99
SOD2-216ENST00000546260 TRAV26-1A0A087WT03 109 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 IGKV1-9A0A0C4DH69 117 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 TEX50A0A1B0GTY4 177 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 HELTA6NFD8 242 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 CHEK1O14757 476 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 TSPAN2O60636 221 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 MMP23AO75900 390 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 GPR6P46095 362 aaPredicted RBP8.86□□□□□ -0.99
SOD2-216ENST00000546260 FOXA3P55318 350 aaPredicted RBP8.86□□□□□ -0.99
SOD2-216ENST00000546260 FAM71F2Q6NXP2 309 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 C9orf40Q8IXQ3 194 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 MRPL43Q8N983 215 aaKnown RBP8.86□□□□□ -0.99
SOD2-216ENST00000546260 ZNF501Q96CX3 271 aaPredicted RBP8.86□□□□□ -0.99
SOD2-216ENST00000546260 MCRIP2Q9BUT9 160 aaKnown RBP8.86□□□□□ -0.99
SOD2-216ENST00000546260 KCNIP2Q9NS61 270 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 LIN7CQ9NUP9 197 aaKnown RBP8.86□□□□□ -0.99
SOD2-216ENST00000546260 ETV2O00321 342 aaPredicted RBP8.86□□□□□ -0.99
SOD2-216ENST00000546260 CEACAM5P06731 702 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 TFF3Q07654 80 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 FAM162BQ5T6X4 162 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 PQLC2Q6ZP29 291 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 FA2HQ7L5A8 372 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 OR1F12Q8NHA8 337 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 SF3B5Q9BWJ5 86 aaKnown RBP8.86□□□□□ -0.99
SOD2-216ENST00000546260 LIME1Q9H400 295 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 SAP30LQ9HAJ7 183 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 TMEM56-RWDD3S4R434 201 aa8.86□□□□□ -0.99
SOD2-216ENST00000546260 CA3P07451 260 aa8.85□□□□□ -0.99
SOD2-216ENST00000546260 RPL31P62899 125 aaKnown RBP8.85□□□□□ -0.99
SOD2-216ENST00000546260 LHFPL2Q6ZUX7 228 aa8.85□□□□□ -0.99
SOD2-216ENST00000546260 HAPLN4Q86UW8 402 aa8.85□□□□□ -0.99
SOD2-216ENST00000546260 KCNE4Q8WWG9 221 aa8.85□□□□□ -0.99
SOD2-216ENST00000546260 OR5P3Q8WZ94 311 aa8.85□□□□□ -0.99
SOD2-216ENST00000546260 COX14Q96I36 57 aa8.85□□□□□ -0.99
SOD2-216ENST00000546260 TPPP3Q9BW30 176 aa8.85□□□□□ -0.99
SOD2-216ENST00000546260 RNF186Q9NXI6 227 aa8.85□□□□□ -0.99
SOD2-216ENST00000546260 ZNF581Q9P0T4 197 aa8.85□□□□□ -0.99
SOD2-216ENST00000546260 F11RQ9Y624 299 aaKnown RBP8.85□□□□□ -0.99
SOD2-216ENST00000546260 ALG1L2C9J202 215 aa8.85□□□□□ -0.99
SOD2-216ENST00000546260 AMY1AP04745 511 aa8.85□□□□□ -0.99
SOD2-216ENST00000546260 ARL14EPLP0DKL9 152 aa8.85□□□□□ -0.99
SOD2-216ENST00000546260 SELENOVP59797 346 aa8.85□□□□□ -0.99
SOD2-216ENST00000546260 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.85□□□□□ -0.992e-7■□□□□ 11.1
SOD2-216ENST00000546260 TMEM144Q7Z5S9 345 aa8.85□□□□□ -0.99
SOD2-216ENST00000546260 NHLRC2Q8NBF2 726 aa8.85□□□□□ -0.99
SOD2-216ENST00000546260 SPSB1Q96BD6 273 aa8.85□□□□□ -0.99
SOD2-216ENST00000546260 PLXNA3P51805 1871 aa8.85□□□□□ -0.99
SOD2-216ENST00000546260 PATJQ8NI35 1801 aa8.85□□□□□ -0.99
SOD2-216ENST00000546260 TRBV9A0A0B4J1U6 114 aa8.85□□□□□ -0.99
SOD2-216ENST00000546260 SERTM2A0A1B0GWG4 89 aa8.85□□□□□ -0.99
SOD2-216ENST00000546260 DXOO77932 396 aaKnown RBP8.85□□□□□ -0.99
SOD2-216ENST00000546260 TIMP3P35625 211 aa8.85□□□□□ -0.99
SOD2-216ENST00000546260 FAM69BQ5VUD6 431 aa8.85□□□□□ -0.99
SOD2-216ENST00000546260 DAZAP1Q96EP5 407 aaKnown RBP8.85□□□□□ -0.99
SOD2-216ENST00000546260 PGLYRP1O75594 196 aaPredicted RBP8.84□□□□□ -0.99
SOD2-216ENST00000546260 EML2O95834 649 aa8.84□□□□□ -0.99
SOD2-216ENST00000546260 NBEAP1P0C6P0 100 aa8.84□□□□□ -0.99
SOD2-216ENST00000546260 ZNF137PP52743 207 aa8.84□□□□□ -0.99
SOD2-216ENST00000546260 PRAMEF5Q5TYX0 476 aa8.84□□□□□ -0.99
SOD2-216ENST00000546260 PRAMEF6Q5VXH4 476 aa8.84□□□□□ -0.99
SOD2-216ENST00000546260 RCHY1Q96PM5 261 aa8.84□□□□□ -0.99
SOD2-216ENST00000546260 GEMIN7Q9H840 131 aaKnown RBP8.84□□□□□ -0.99
SOD2-216ENST00000546260 TSSC4Q9Y5U2 329 aaPredicted RBP8.84□□□□□ -0.99
SOD2-216ENST00000546260 CENPFP49454 3210 aa8.84□□□□□ -0.99
SOD2-216ENST00000546260 TRAV8-6A0A0B4J262 113 aa8.84□□□□□ -0.99
SOD2-216ENST00000546260 CD5LO43866 347 aa8.84□□□□□ -0.99
SOD2-216ENST00000546260 HNRNPA1P09651 372 aaKnown RBP eCLIP8.84□□□□□ -0.99
SOD2-216ENST00000546260 GCSHP23434 173 aa8.84□□□□□ -0.99
SOD2-216ENST00000546260 LHFPL4Q7Z7J7 247 aa8.84□□□□□ -0.99
SOD2-216ENST00000546260 OR4P4Q8NGL7 312 aa8.84□□□□□ -0.99
SOD2-216ENST00000546260 ST20Q9HBF5 79 aa8.84□□□□□ -0.99
SOD2-216ENST00000546260 TP73-AS1Q9UF72 201 aa8.84□□□□□ -0.99
SOD2-216ENST00000546260 PTPRZ1P23471 2315 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms