RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 ZNF497Q6ZNH5 498 aa11.95□□□□□ -0.5
SRP54-202ENST00000546080 TEX43Q6ZNM6 134 aa11.95□□□□□ -0.5
SRP54-202ENST00000546080 ZDHHC16Q969W1 377 aa11.95□□□□□ -0.5
SRP54-202ENST00000546080 PATZ1Q9HBE1 687 aaKnown RBP11.95□□□□□ -0.5
SRP54-202ENST00000546080 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.95□□□□□ -0.5
SRP54-202ENST00000546080 CBY1Q9Y3M2 126 aa11.95□□□□□ -0.5
SRP54-202ENST00000546080 MPC1Q9Y5U8 109 aa11.95□□□□□ -0.5
SRP54-202ENST00000546080 PGPEP1LA6NFU8 196 aa11.95□□□□□ -0.5
SRP54-202ENST00000546080 SS18L1O75177 396 aaPredicted RBP11.95□□□□□ -0.5
SRP54-202ENST00000546080 SRFP11831 508 aa11.95□□□□□ -0.5
SRP54-202ENST00000546080 CD33P20138 364 aa11.95□□□□□ -0.5
SRP54-202ENST00000546080 KITLGP21583 273 aa11.95□□□□□ -0.5
SRP54-202ENST00000546080 YPEL3P61236 119 aaPredicted RBP11.95□□□□□ -0.5
SRP54-202ENST00000546080 RANP62826 216 aaKnown RBP11.95□□□□□ -0.5
SRP54-202ENST00000546080 Q6ZWC4 215 aa11.95□□□□□ -0.5
SRP54-202ENST00000546080 ZNF114Q8NC26 417 aa11.95□□□□□ -0.5
SRP54-202ENST00000546080 CIB3Q96Q77 187 aaPredicted RBP11.95□□□□□ -0.5
SRP54-202ENST00000546080 PKIBQ9C010 78 aa11.95□□□□□ -0.5
SRP54-202ENST00000546080 OR51B6Q9H340 312 aa11.95□□□□□ -0.5
SRP54-202ENST00000546080 TRIOBPQ9H2D6 2365 aa11.95□□□□□ -0.5
SRP54-202ENST00000546080 YPEL1O60688 119 aa11.94□□□□□ -0.5
SRP54-202ENST00000546080 LINC00614P0C842 121 aa11.94□□□□□ -0.5
SRP54-202ENST00000546080 VWC2Q2TAL6 325 aa11.94□□□□□ -0.5
SRP54-202ENST00000546080 TPTE2P1Q5T6R2 138 aa11.94□□□□□ -0.5
SRP54-202ENST00000546080 ZNF645Q8N7E2 425 aa11.94□□□□□ -0.5
SRP54-202ENST00000546080 YPEL2Q96QA6 119 aa11.94□□□□□ -0.5
SRP54-202ENST00000546080 DUSP23Q9BVJ7 150 aa11.94□□□□□ -0.5
SRP54-202ENST00000546080 PAM16Q9Y3D7 125 aa11.94□□□□□ -0.5
SRP54-202ENST00000546080 CEP192Q8TEP8 1941 aa11.94□□□□□ -0.5
SRP54-202ENST00000546080 TRAV38-1A0A0B4J264 116 aa11.94□□□□□ -0.5
SRP54-202ENST00000546080 ZNF503-AS2A6NEH8 195 aa11.94□□□□□ -0.5
SRP54-202ENST00000546080 RBFOX2O43251 390 aaKnown RBP eCLIP11.94□□□□□ -0.5
SRP54-202ENST00000546080 RBMXL2O75526 392 aaKnown RBP11.94□□□□□ -0.5
SRP54-202ENST00000546080 KLF7O75840 302 aaPredicted RBP11.94□□□□□ -0.5
SRP54-202ENST00000546080 OR2H2O95918 312 aa11.94□□□□□ -0.5
SRP54-202ENST00000546080 GDF1P27539 372 aa11.94□□□□□ -0.5
SRP54-202ENST00000546080 BRS3P32247 399 aa11.94□□□□□ -0.5
SRP54-202ENST00000546080 SELENOTP62341 195 aa11.94□□□□□ -0.5
SRP54-202ENST00000546080 DIRC2Q96SL1 478 aa11.94□□□□□ -0.5
SRP54-202ENST00000546080 VAMP8Q9BV40 100 aa11.94□□□□□ -0.5
SRP54-202ENST00000546080 LINC00470Q9BZP3 86 aa11.94□□□□□ -0.5
SRP54-202ENST00000546080 LPAR2Q9HBW0 351 aa11.94□□□□□ -0.5
SRP54-202ENST00000546080 LY6G6EA0A0G2JKS1 128 aa11.93□□□□□ -0.5
SRP54-202ENST00000546080 A0A1W2PPV4 95 aa11.93□□□□□ -0.5
SRP54-202ENST00000546080 J3QT63 122 aa11.93□□□□□ -0.5
SRP54-202ENST00000546080 S1PR2O95136 353 aa11.93□□□□□ -0.5
SRP54-202ENST00000546080 P0C879 139 aa11.93□□□□□ -0.5
SRP54-202ENST00000546080 RAC2P15153 192 aa11.93□□□□□ -0.5
SRP54-202ENST00000546080 BATFQ16520 125 aa11.93□□□□□ -0.5
SRP54-202ENST00000546080 TDRG1Q3Y452 100 aa11.93□□□□□ -0.5
SRP54-202ENST00000546080 ZNF808Q8N4W9 903 aaPredicted RBP11.93□□□□□ -0.5
SRP54-202ENST00000546080 HSPB9Q9BQS6 159 aa11.93□□□□□ -0.5
SRP54-202ENST00000546080 OR2D2Q9H210 308 aa11.93□□□□□ -0.5
SRP54-202ENST00000546080 U3KQA8 63 aa11.93□□□□□ -0.5
SRP54-202ENST00000546080 CA6P23280 308 aa11.92□□□□□ -0.5
SRP54-202ENST00000546080 CD82P27701 267 aa11.92□□□□□ -0.5
SRP54-202ENST00000546080 TNFSF10P50591 281 aa11.92□□□□□ -0.5
SRP54-202ENST00000546080 RPL30P62888 115 aaKnown RBP11.92□□□□□ -0.5
SRP54-202ENST00000546080 CATR1Q13166 79 aa11.92□□□□□ -0.5
SRP54-202ENST00000546080 IGFBP7Q16270 282 aa11.92□□□□□ -0.5
SRP54-202ENST00000546080 SPINK9Q5DT21 86 aa11.92□□□□□ -0.5
SRP54-202ENST00000546080 ARSJQ5FYB0 599 aaPredicted RBP11.92□□□□□ -0.5
SRP54-202ENST00000546080 ZBTB34Q8NCN2 500 aa11.92□□□□□ -0.5
SRP54-202ENST00000546080 POM121L2Q96KW2 1035 aa11.92□□□□□ -0.5
SRP54-202ENST00000546080 MBNL3Q9NUK0 354 aaKnown RBP11.92□□□□□ -0.5
SRP54-202ENST00000546080 TP53TG3Q9ULZ0 132 aa11.92□□□□□ -0.5
SRP54-202ENST00000546080 NCKAP5O14513 1909 aa11.92□□□□□ -0.5
SRP54-202ENST00000546080 SERF1AO75920 110 aa11.92□□□□□ -0.5
SRP54-202ENST00000546080 CRISP2P16562 243 aa11.92□□□□□ -0.5
SRP54-202ENST00000546080 HNF1AP20823 631 aa11.92□□□□□ -0.5
SRP54-202ENST00000546080 CBLN1P23435 193 aa11.92□□□□□ -0.5
SRP54-202ENST00000546080 LHX2P50458 406 aa11.92□□□□□ -0.5
SRP54-202ENST00000546080 FOXG1P55316 489 aaPredicted RBP11.92□□□□□ -0.5
SRP54-202ENST00000546080 PLP2Q04941 152 aa11.92□□□□□ -0.5
SRP54-202ENST00000546080 IL11RAQ14626 422 aa11.92□□□□□ -0.5
SRP54-202ENST00000546080 GCSAMLQ5JQS6 135 aa11.92□□□□□ -0.5
SRP54-202ENST00000546080 OR5AU1Q8NGC0 362 aa11.92□□□□□ -0.5
SRP54-202ENST00000546080 OR10G8Q8NGN5 311 aa11.92□□□□□ -0.5
SRP54-202ENST00000546080 VN1R17PQ8TDU5 208 aa11.92□□□□□ -0.5
SRP54-202ENST00000546080 RAB1CQ92928 201 aa11.92□□□□□ -0.5
SRP54-202ENST00000546080 HLA-CQ95604 372 aa11.92□□□□□ -0.5
SRP54-202ENST00000546080 OR2J1Q9GZK6 312 aa11.92□□□□□ -0.5
SRP54-202ENST00000546080 MRPS18CQ9Y3D5 142 aaKnown RBP11.92□□□□□ -0.5
SRP54-202ENST00000546080 WIPI2Q9Y4P8 454 aa11.92□□□□□ -0.5
SRP54-202ENST00000546080 TRIOO75962 3097 aa11.91□□□□□ -0.5
SRP54-202ENST00000546080 ESDP10768 282 aa11.91□□□□□ -0.5
SRP54-202ENST00000546080 EPHA8P29322 1005 aaPredicted RBP11.91□□□□□ -0.5
SRP54-202ENST00000546080 CDKN1AP38936 164 aa11.91□□□□□ -0.5
SRP54-202ENST00000546080 EDDM3BP56851 147 aa11.91□□□□□ -0.5
SRP54-202ENST00000546080 ZNF90Q03938 601 aa11.91□□□□□ -0.5
SRP54-202ENST00000546080 TMEM249Q2WGJ8 235 aa11.91□□□□□ -0.5
SRP54-202ENST00000546080 H2BFWTQ7Z2G1 175 aa11.91□□□□□ -0.5
SRP54-202ENST00000546080 OR2Y1Q8NGV0 311 aa11.91□□□□□ -0.5
SRP54-202ENST00000546080 MRPL18Q9H0U6 180 aaKnown RBP11.91□□□□□ -0.5
SRP54-202ENST00000546080 CHODLQ9H9P2 273 aa11.91□□□□□ -0.5
SRP54-202ENST00000546080 ARHGAP21Q5T5U3 1957 aa11.91□□□□□ -0.5
SRP54-202ENST00000546080 PRUNE2Q8WUY3 3088 aa11.91□□□□□ -0.5
SRP54-202ENST00000546080 TRBV20OR9-2A0A075B6H5 130 aa11.91□□□□□ -0.5
SRP54-202ENST00000546080 IGKV3D-15A0A087WSY6 115 aa11.91□□□□□ -0.5
SRP54-202ENST00000546080 RAB29O14966 203 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms