RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 HIST1H1BP16401 226 aaKnown RBP12.77□□□□□ -0.37
CNN3-207ENST00000545882 UBE2NP61088 152 aaKnown RBP12.77□□□□□ -0.37
CNN3-207ENST00000545882 VWC2Q2TAL6 325 aa12.77□□□□□ -0.37
CNN3-207ENST00000545882 MRGPRDQ8TDS7 321 aa12.77□□□□□ -0.37
CNN3-207ENST00000545882 RPUSD4Q96CM3 377 aaKnown RBP12.77□□□□□ -0.37
CNN3-207ENST00000545882 PARLQ9H300 379 aa12.77□□□□□ -0.37
CNN3-207ENST00000545882 ZDHHC11Q9H8X9 412 aa12.77□□□□□ -0.37
CNN3-207ENST00000545882 TET2Q6N021 2002 aaPredicted RBP12.77□□□□□ -0.37
CNN3-207ENST00000545882 TMEM250H0YL14 139 aa12.76□□□□□ -0.37
CNN3-207ENST00000545882 RAB29O14966 203 aa12.76□□□□□ -0.37
CNN3-207ENST00000545882 CLDN14O95500 239 aa12.76□□□□□ -0.37
CNN3-207ENST00000545882 BSXQ3C1V8 233 aa12.76□□□□□ -0.37
CNN3-207ENST00000545882 FFAR4Q5NUL3 377 aa12.76□□□□□ -0.37
CNN3-207ENST00000545882 ACP7Q6ZNF0 438 aa12.76□□□□□ -0.37
CNN3-207ENST00000545882 Q8N7P7 452 aa12.76□□□□□ -0.37
CNN3-207ENST00000545882 LINC00469Q8N7U9 141 aa12.76□□□□□ -0.37
CNN3-207ENST00000545882 OR10A7Q8NGE5 316 aa12.76□□□□□ -0.37
CNN3-207ENST00000545882 DTD1Q8TEA8 209 aa12.76□□□□□ -0.37
CNN3-207ENST00000545882 SNX22Q96L94 193 aa12.76□□□□□ -0.37
CNN3-207ENST00000545882 FER1L6-AS2Q96M78 137 aa12.76□□□□□ -0.37
CNN3-207ENST00000545882 SRD5A3Q9H8P0 318 aa12.76□□□□□ -0.37
CNN3-207ENST00000545882 OBP2BQ9NPH6 170 aa12.76□□□□□ -0.37
CNN3-207ENST00000545882 NCOR1O75376 2440 aa12.76□□□□□ -0.37
CNN3-207ENST00000545882 GATCO43716 136 aaKnown RBP12.76□□□□□ -0.37
CNN3-207ENST00000545882 DEFA4P12838 97 aa12.76□□□□□ -0.37
CNN3-207ENST00000545882 PSMB3P49720 205 aa12.76□□□□□ -0.37
CNN3-207ENST00000545882 PMP22Q01453 160 aa12.76□□□□□ -0.37
CNN3-207ENST00000545882 CATR1Q13166 79 aa12.76□□□□□ -0.37
CNN3-207ENST00000545882 SPINK9Q5DT21 86 aa12.76□□□□□ -0.37
CNN3-207ENST00000545882 FIP1L1Q6UN15 594 aaKnown RBP12.76□□□□□ -0.37
CNN3-207ENST00000545882 GCNT2Q8N0V5 402 aa12.76□□□□□ -0.37
CNN3-207ENST00000545882 OR51G1Q8NGK1 321 aa12.76□□□□□ -0.37
CNN3-207ENST00000545882 PFDN5Q99471 154 aa12.76□□□□□ -0.37
CNN3-207ENST00000545882 HIST1H2BLQ99880 126 aa12.76□□□□□ -0.37
CNN3-207ENST00000545882 NPCDR1Q9BY65 106 aa12.76□□□□□ -0.37
CNN3-207ENST00000545882 BDP1A6H8Y1 2624 aa12.76□□□□□ -0.37
CNN3-207ENST00000545882 IGHV3-43A0A0B4J1X8 118 aa12.75□□□□□ -0.37
CNN3-207ENST00000545882 WISP2O76076 250 aa12.75□□□□□ -0.37
CNN3-207ENST00000545882 AGFG2O95081 481 aa12.75□□□□□ -0.37
CNN3-207ENST00000545882 IGHV3-43DP0DP04 118 aa12.75□□□□□ -0.37
CNN3-207ENST00000545882 COL10A1Q03692 680 aa12.75□□□□□ -0.37
CNN3-207ENST00000545882 RTP5Q14D33 572 aa12.75□□□□□ -0.37
CNN3-207ENST00000545882 DNLZQ5SXM8 178 aa12.75□□□□□ -0.37
CNN3-207ENST00000545882 PRAMEF6Q5VXH4 476 aa12.75□□□□□ -0.37
CNN3-207ENST00000545882 WDR82Q6UXN9 313 aa12.75□□□□□ -0.37
CNN3-207ENST00000545882 TMPRSS7Q7RTY8 843 aa12.75□□□□□ -0.37
CNN3-207ENST00000545882 TPRX1Q8N7U7 411 aa12.75□□□□□ -0.37
CNN3-207ENST00000545882 NECAP1Q8NC96 275 aa12.75□□□□□ -0.37
CNN3-207ENST00000545882 OR10P1Q8NGE3 313 aa12.75□□□□□ -0.37
CNN3-207ENST00000545882 OR13A1Q8NGR1 328 aa12.75□□□□□ -0.37
CNN3-207ENST00000545882 PRR7Q8TB68 274 aa12.75□□□□□ -0.37
CNN3-207ENST00000545882 RAB24Q969Q5 203 aa12.75□□□□□ -0.37
CNN3-207ENST00000545882 ELOVL1Q9BW60 279 aa12.75□□□□□ -0.37
CNN3-207ENST00000545882 CLCF1Q9UBD9 225 aa12.75□□□□□ -0.37
CNN3-207ENST00000545882 MBP02144 154 aa12.74□□□□□ -0.37
CNN3-207ENST00000545882 SSTR5P35346 364 aa12.74□□□□□ -0.37
CNN3-207ENST00000545882 GAMTQ14353 236 aa12.74□□□□□ -0.37
CNN3-207ENST00000545882 INO80CQ6PI98 192 aaPredicted RBP12.74□□□□□ -0.37
CNN3-207ENST00000545882 OR4F5Q8NH21 305 aa12.74□□□□□ -0.37
CNN3-207ENST00000545882 OR4F4Q96R69 305 aa12.74□□□□□ -0.37
CNN3-207ENST00000545882 ACTR3CQ9C0K3 210 aaPredicted RBP12.74□□□□□ -0.37
CNN3-207ENST00000545882 PITPNC1Q9UKF7 332 aa12.74□□□□□ -0.37
CNN3-207ENST00000545882 NDUFS6O75380 124 aaKnown RBP12.74□□□□□ -0.37
CNN3-207ENST00000545882 NPPCP23582 126 aa12.74□□□□□ -0.37
CNN3-207ENST00000545882 GPX4P36969 197 aaPredicted RBP12.74□□□□□ -0.37
CNN3-207ENST00000545882 GABRA2P47869 451 aa12.74□□□□□ -0.37
CNN3-207ENST00000545882 H2BFWTQ7Z2G1 175 aa12.74□□□□□ -0.37
CNN3-207ENST00000545882 WDR31Q8NA23 367 aa12.74□□□□□ -0.37
CNN3-207ENST00000545882 DCTN5Q9BTE1 182 aa12.74□□□□□ -0.37
CNN3-207ENST00000545882 CXXC4Q9H2H0 198 aa12.74□□□□□ -0.37
CNN3-207ENST00000545882 MANBALQ9NQG1 85 aa12.74□□□□□ -0.37
CNN3-207ENST00000545882 URB1O60287 2271 aaKnown RBP12.74□□□□□ -0.37
CNN3-207ENST00000545882 C15orf62A8K5M9 175 aa12.73□□□□□ -0.37
CNN3-207ENST00000545882 ST8SIA5O15466 376 aa12.73□□□□□ -0.37
CNN3-207ENST00000545882 PAGE4O60829 102 aa12.73□□□□□ -0.37
CNN3-207ENST00000545882 PROP1O75360 226 aa12.73□□□□□ -0.37
CNN3-207ENST00000545882 COX5AP20674 150 aa12.73□□□□□ -0.37
CNN3-207ENST00000545882 GALR1P47211 349 aa12.73□□□□□ -0.37
CNN3-207ENST00000545882 GNB2P62879 340 aa12.73□□□□□ -0.37
CNN3-207ENST00000545882 ARG2P78540 354 aa12.73□□□□□ -0.37
CNN3-207ENST00000545882 TGFBR3Q03167 851 aa12.73□□□□□ -0.37
CNN3-207ENST00000545882 GUSBP1Q15486 140 aa12.73□□□□□ -0.37
CNN3-207ENST00000545882 TMEM183AQ8IXX5 376 aa12.73□□□□□ -0.37
CNN3-207ENST00000545882 TCTEX1D1Q8N7M0 179 aa12.73□□□□□ -0.37
CNN3-207ENST00000545882 PACRGQ96M98 296 aaPredicted RBP12.73□□□□□ -0.37
CNN3-207ENST00000545882 TAAR6Q96RI8 345 aa12.73□□□□□ -0.37
CNN3-207ENST00000545882 GAB2Q9UQC2 676 aa12.73□□□□□ -0.37
CNN3-207ENST00000545882 LAMP3Q9UQV4 416 aa12.73□□□□□ -0.37
CNN3-207ENST00000545882 DEFB108AA8MXU0 73 aa12.72□□□□□ -0.37
CNN3-207ENST00000545882 C15orf65H3BRN8 121 aa12.72□□□□□ -0.37
CNN3-207ENST00000545882 H7BYZ3 331 aa12.72□□□□□ -0.37
CNN3-207ENST00000545882 GYPAP02724 150 aa12.72□□□□□ -0.37
CNN3-207ENST00000545882 OR9G9P0C7N8 305 aa12.72□□□□□ -0.37
CNN3-207ENST00000545882 FOXF2Q12947 444 aa12.72□□□□□ -0.37
CNN3-207ENST00000545882 Q3ZCU0 254 aa12.72□□□□□ -0.37
CNN3-207ENST00000545882 ZNF66Q6ZN08 573 aa12.72□□□□□ -0.37
CNN3-207ENST00000545882 Q6ZT83 130 aa12.72□□□□□ -0.37
CNN3-207ENST00000545882 TGIF2LYQ8IUE0 185 aa12.72□□□□□ -0.37
CNN3-207ENST00000545882 RFESDQ8TAC1 157 aa12.72□□□□□ -0.37
CNN3-207ENST00000545882 NINJ1Q92982 152 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms