RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 F8P00451 2351 aa12.97□□□□□ -0.33
PRPF40A-212ENST00000545856 TRAV6A0A075B6T7 132 aa12.96□□□□□ -0.33
PRPF40A-212ENST00000545856 A0A0B4J2A0 478 aa12.96□□□□□ -0.33
PRPF40A-212ENST00000545856 TEX13DA0A0J9YY54 714 aaPredicted RBP12.96□□□□□ -0.33
PRPF40A-212ENST00000545856 DUXBA0A1W2PPF3 345 aa12.96□□□□□ -0.33
PRPF40A-212ENST00000545856 VGLL3A8MV65 326 aa12.96□□□□□ -0.33
PRPF40A-212ENST00000545856 PROP1O75360 226 aa12.96□□□□□ -0.33
PRPF40A-212ENST00000545856 CD1BP29016 333 aa12.96□□□□□ -0.33
PRPF40A-212ENST00000545856 BRS3P32247 399 aa12.96□□□□□ -0.33
PRPF40A-212ENST00000545856 PHLDA2Q53GA4 152 aa12.96□□□□□ -0.33
PRPF40A-212ENST00000545856 KLF17Q5JT82 389 aaPredicted RBP12.96□□□□□ -0.33
PRPF40A-212ENST00000545856 UTF1Q5T230 341 aa12.96□□□□□ -0.33
PRPF40A-212ENST00000545856 LYG2Q86SG7 212 aa12.96□□□□□ -0.33
PRPF40A-212ENST00000545856 TBC1D26Q86UD7 250 aa12.96□□□□□ -0.33
PRPF40A-212ENST00000545856 PDPNQ86YL7 162 aa12.96□□□□□ -0.33
PRPF40A-212ENST00000545856 OR4S2Q8NH73 311 aa12.96□□□□□ -0.33
PRPF40A-212ENST00000545856 DDB2Q92466 427 aa12.96□□□□□ -0.33
PRPF40A-212ENST00000545856 TMEM230Q96A57 120 aa12.96□□□□□ -0.33
PRPF40A-212ENST00000545856 NABP2Q9BQ15 211 aa12.96□□□□□ -0.33
PRPF40A-212ENST00000545856 MEGF9Q9H1U4 602 aa12.96□□□□□ -0.33
PRPF40A-212ENST00000545856 SHPKQ9UHJ6 478 aa12.96□□□□□ -0.33
PRPF40A-212ENST00000545856 MXRA5Q9NR99 2828 aa12.96□□□□□ -0.33
PRPF40A-212ENST00000545856 MTORP42345 2549 aa12.96□□□□□ -0.33
PRPF40A-212ENST00000545856 IGHV1-3A0A0C4DH29 117 aa12.95□□□□□ -0.34
PRPF40A-212ENST00000545856 C3orf85A0A1B0GTC6 90 aa12.95□□□□□ -0.34
PRPF40A-212ENST00000545856 C7orf66A4D0T2 115 aa12.95□□□□□ -0.34
PRPF40A-212ENST00000545856 DUS4LO95620 317 aaKnown RBP12.95□□□□□ -0.34
PRPF40A-212ENST00000545856 AVPP01185 164 aa12.95□□□□□ -0.34
PRPF40A-212ENST00000545856 IFNA2P01563 188 aa12.95□□□□□ -0.34
PRPF40A-212ENST00000545856 HLA-AP01891 365 aaKnown RBP12.95□□□□□ -0.34
PRPF40A-212ENST00000545856 IGHV4-38-2P0DP08 117 aa12.95□□□□□ -0.34
PRPF40A-212ENST00000545856 UCP1P25874 307 aa12.95□□□□□ -0.34
PRPF40A-212ENST00000545856 DHRS2Q13268 280 aa12.95□□□□□ -0.34
PRPF40A-212ENST00000545856 C4orf46Q504U0 113 aa12.95□□□□□ -0.34
PRPF40A-212ENST00000545856 RPL39P5Q59GN2 51 aa12.95□□□□□ -0.34
PRPF40A-212ENST00000545856 C1orf229Q6ZS94 237 aaPredicted RBP12.95□□□□□ -0.34
PRPF40A-212ENST00000545856 LRTM2Q8N967 370 aa12.95□□□□□ -0.34
PRPF40A-212ENST00000545856 TCTEX1D2Q8WW35 142 aa12.95□□□□□ -0.34
PRPF40A-212ENST00000545856 C5orf30Q96GV9 206 aa12.95□□□□□ -0.34
PRPF40A-212ENST00000545856 TMEM222Q9H0R3 208 aa12.95□□□□□ -0.34
PRPF40A-212ENST00000545856 COMMD9Q9P000 198 aa12.95□□□□□ -0.34
PRPF40A-212ENST00000545856 A0A1W2PPI3 338 aa12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 CREBL2O60519 120 aaPredicted RBP12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 SFT2D2O95562 160 aa12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 CT45A6P0DMU7 189 aa12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 CT45A5P0DMU8 189 aa12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 CT45A7P0DMV0 189 aa12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 AKR1C4P17516 323 aa12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 THNSL2Q86YJ6 484 aa12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 PIP4P2Q8N4L2 257 aa12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 COQ8AQ8NI60 647 aa12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 OSR1Q8TAX0 266 aaPredicted RBP12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 ZNF431Q8TF32 576 aaPredicted RBP12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 PRDM13Q9H4Q3 707 aa12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 PLEKHA2Q9HB19 425 aa12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 CDC42EP3Q9UKI2 254 aa12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 FLVCR2Q9UPI3 526 aa12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 WASHC3Q9Y3C0 194 aa12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 FAM96BQ9Y3D0 163 aa12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 H0YJW9 148 aa12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 HPRT1P00492 218 aa12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 SERPINE2P07093 398 aa12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 PI3P19957 117 aa12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 ANXA7P20073 488 aaKnown RBP12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 VAMP1P23763 118 aa12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 DLX1P56177 255 aa12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 SUPT4H1P63272 117 aaKnown RBP12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 PPP1R1AQ13522 171 aa12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 FAM120AOSQ5T036 256 aa12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 SPAG16Q8N0X2 631 aa12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 ADAD2Q8NCV1 583 aaKnown RBP12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 OR4C13Q8NGP0 309 aa12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 MITD1Q8WV92 249 aa12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 TMEM56Q96MV1 263 aa12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 PHB2Q99623 299 aa12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 MRPL20Q9BYC9 149 aaKnown RBP12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 MS4A7Q9GZW8 240 aaPredicted RBP12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 YAE1D1Q9NRH1 226 aa12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 TMEM56-RWDD3S4R434 201 aa12.94□□□□□ -0.34
PRPF40A-212ENST00000545856 C9orf170A2RU37 121 aa12.93□□□□□ -0.34
PRPF40A-212ENST00000545856 LINC00473A8K010 186 aa12.93□□□□□ -0.34
PRPF40A-212ENST00000545856 CDS2O95674 445 aa12.93□□□□□ -0.34
PRPF40A-212ENST00000545856 FGF2P09038 288 aa12.93□□□□□ -0.34
PRPF40A-212ENST00000545856 SPNP16150 400 aa12.93□□□□□ -0.34
PRPF40A-212ENST00000545856 LGALS7P47929 136 aa12.93□□□□□ -0.34
PRPF40A-212ENST00000545856 RAB25P57735 213 aa12.93□□□□□ -0.34
PRPF40A-212ENST00000545856 EBI3Q14213 229 aa12.93□□□□□ -0.34
PRPF40A-212ENST00000545856 TATDN3Q17R31 274 aa12.93□□□□□ -0.34
PRPF40A-212ENST00000545856 TUSC1Q2TAM9 212 aa12.93□□□□□ -0.34
PRPF40A-212ENST00000545856 TMEM177Q53S58 311 aa12.93□□□□□ -0.34
PRPF40A-212ENST00000545856 Q6ZNX1 250 aa12.93□□□□□ -0.34
PRPF40A-212ENST00000545856 LIAT1Q6ZQX7 453 aa12.93□□□□□ -0.34
PRPF40A-212ENST00000545856 LHFPL4Q7Z7J7 247 aa12.93□□□□□ -0.34
PRPF40A-212ENST00000545856 LGI3Q8N145 548 aa12.93□□□□□ -0.34
PRPF40A-212ENST00000545856 ZNF383Q8NA42 475 aa12.93□□□□□ -0.34
PRPF40A-212ENST00000545856 OR8H1Q8NGG4 311 aa12.93□□□□□ -0.34
PRPF40A-212ENST00000545856 OR51H1Q8NH63 302 aa12.93□□□□□ -0.34
PRPF40A-212ENST00000545856 CFHR4Q92496 578 aa12.93□□□□□ -0.34
PRPF40A-212ENST00000545856 AJUBAQ96IF1 538 aa12.93□□□□□ -0.34
PRPF40A-212ENST00000545856 SLC35D1Q9NTN3 355 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms