RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 DCAF12Q5T6F0 453 aa7.35□□□□□ -1.23
TDP1-204ENST00000545686 NUFIP2Q7Z417 695 aaKnown RBP7.35□□□□□ -1.23
TDP1-204ENST00000545686 MRPL52Q86TS9 123 aaKnown RBP7.35□□□□□ -1.23
TDP1-204ENST00000545686 TDHQ8IZJ6 230 aa7.35□□□□□ -1.23
TDP1-204ENST00000545686 CT55Q8WUE5 264 aa7.35□□□□□ -1.23
TDP1-204ENST00000545686 WDYHV1Q96HA8 205 aa7.35□□□□□ -1.23
TDP1-204ENST00000545686 TRAV9-1A0A075B6T8 112 aa7.34□□□□□ -1.23
TDP1-204ENST00000545686 KIR2DL5BA0A0G2JN68 375 aa7.34□□□□□ -1.23
TDP1-204ENST00000545686 KIR2DL5BA0A0G2JPC4 375 aa7.34□□□□□ -1.23
TDP1-204ENST00000545686 OOEPA6NGQ2 149 aa7.34□□□□□ -1.23
TDP1-204ENST00000545686 ZNHIT1O43257 154 aa7.34□□□□□ -1.23
TDP1-204ENST00000545686 NEURL1O76050 574 aa7.34□□□□□ -1.23
TDP1-204ENST00000545686 WISP2O76076 250 aa7.34□□□□□ -1.23
TDP1-204ENST00000545686 S1PR2O95136 353 aa7.34□□□□□ -1.23
TDP1-204ENST00000545686 KRASP01116 189 aa7.34□□□□□ -1.23
TDP1-204ENST00000545686 TBC1D28Q2M2D7 210 aa7.34□□□□□ -1.23
TDP1-204ENST00000545686 PEAR1Q5VY43 1037 aaPredicted RBP7.34□□□□□ -1.23
TDP1-204ENST00000545686 SLC35E4Q6ICL7 350 aa7.34□□□□□ -1.23
TDP1-204ENST00000545686 C6orf15Q6UXA7 325 aaPredicted RBP7.34□□□□□ -1.23
TDP1-204ENST00000545686 KIR2DL5AQ8N109 375 aa7.34□□□□□ -1.23
TDP1-204ENST00000545686 HES4Q9HCC6 221 aa7.34□□□□□ -1.23
TDP1-204ENST00000545686 WDR83OSQ9Y284 106 aa7.34□□□□□ -1.23
TDP1-204ENST00000545686 PXMP4Q9Y6I8 212 aa7.34□□□□□ -1.23
TDP1-204ENST00000545686 WDFY3Q8IZQ1 3526 aa7.34□□□□□ -1.23
TDP1-204ENST00000545686 ZG16O60844 167 aa7.34□□□□□ -1.24
TDP1-204ENST00000545686 CER1O95813 267 aa7.34□□□□□ -1.24
TDP1-204ENST00000545686 HAND1O96004 215 aa7.34□□□□□ -1.24
TDP1-204ENST00000545686 CFIP05156 583 aa7.34□□□□□ -1.24
TDP1-204ENST00000545686 CELA3AP09093 270 aa7.34□□□□□ -1.24
TDP1-204ENST00000545686 SNRPCP09234 159 aaKnown RBP7.34□□□□□ -1.24
TDP1-204ENST00000545686 NPPCP23582 126 aa7.34□□□□□ -1.24
TDP1-204ENST00000545686 RPL30P62888 115 aaKnown RBP7.34□□□□□ -1.24
TDP1-204ENST00000545686 ZNF816Q0VGE8 651 aaPredicted RBP7.34□□□□□ -1.24
TDP1-204ENST00000545686 AARDQ4LEZ3 155 aa7.34□□□□□ -1.24
TDP1-204ENST00000545686 C1orf194Q5T5A4 169 aa7.34□□□□□ -1.24
TDP1-204ENST00000545686 FAM78BQ5VT40 261 aa7.34□□□□□ -1.24
TDP1-204ENST00000545686 SPINK14Q6IE38 97 aa7.34□□□□□ -1.24
TDP1-204ENST00000545686 H2BFWTQ7Z2G1 175 aa7.34□□□□□ -1.24
TDP1-204ENST00000545686 TGIF2LXQ8IUE1 241 aa7.34□□□□□ -1.24
TDP1-204ENST00000545686 MCEMP1Q8IX19 187 aa7.34□□□□□ -1.24
TDP1-204ENST00000545686 BCL2L2Q92843 193 aaPredicted RBP7.34□□□□□ -1.24
TDP1-204ENST00000545686 C5orf30Q96GV9 206 aa7.34□□□□□ -1.24
TDP1-204ENST00000545686 ZPBPQ9BS86 351 aa7.34□□□□□ -1.24
TDP1-204ENST00000545686 SIT1Q9Y3P8 196 aa7.34□□□□□ -1.24
TDP1-204ENST00000545686 TRAPPC1Q9Y5R8 145 aa7.34□□□□□ -1.24
TDP1-204ENST00000545686 FAM90A9PA6NNJ1 464 aa7.33□□□□□ -1.24
TDP1-204ENST00000545686 ZNF891A8MT65 544 aaPredicted RBP7.33□□□□□ -1.24
TDP1-204ENST00000545686 C1QTNF9BB2RNN3 333 aa7.33□□□□□ -1.24
TDP1-204ENST00000545686 C12orf77C9JDV5 145 aa7.33□□□□□ -1.24
TDP1-204ENST00000545686 TCAPO15273 167 aa7.33□□□□□ -1.24
TDP1-204ENST00000545686 PDGFBP01127 241 aaPredicted RBP7.33□□□□□ -1.24
TDP1-204ENST00000545686 MPLP40238 635 aa7.33□□□□□ -1.24
TDP1-204ENST00000545686 ERVFC1-1P60608 527 aa7.33□□□□□ -1.24
TDP1-204ENST00000545686 UBE2NP61088 152 aaKnown RBP7.33□□□□□ -1.24
TDP1-204ENST00000545686 PMP22Q01453 160 aa7.33□□□□□ -1.24
TDP1-204ENST00000545686 MRPL49Q13405 166 aaKnown RBP7.33□□□□□ -1.24
TDP1-204ENST00000545686 OR1C1Q15619 314 aa7.33□□□□□ -1.24
TDP1-204ENST00000545686 MDP1Q86V88 176 aa7.33□□□□□ -1.24
TDP1-204ENST00000545686 Q8N7P7 452 aa7.33□□□□□ -1.24
TDP1-204ENST00000545686 OR1L1Q8NH94 360 aa7.33□□□□□ -1.24
TDP1-204ENST00000545686 UBALD1Q8TB05 177 aa7.33□□□□□ -1.24
TDP1-204ENST00000545686 NINJ1Q92982 152 aa7.33□□□□□ -1.24
TDP1-204ENST00000545686 THOC3Q96J01 351 aaKnown RBP7.33□□□□□ -1.24
TDP1-204ENST00000545686 HSD17B10Q99714 261 aaKnown RBP7.33□□□□□ -1.24
TDP1-204ENST00000545686 TTTY12Q9BZ98 90 aa7.33□□□□□ -1.24
TDP1-204ENST00000545686 FKBP11Q9NYL4 201 aa7.33□□□□□ -1.24
TDP1-204ENST00000545686 ABI3Q9P2A4 366 aa7.33□□□□□ -1.24
TDP1-204ENST00000545686 A0A0U1RQK1 487 aa7.33□□□□□ -1.24
TDP1-204ENST00000545686 ZNF320A2RRD8 509 aa7.33□□□□□ -1.24
TDP1-204ENST00000545686 SELEP16581 610 aa7.33□□□□□ -1.24
TDP1-204ENST00000545686 OR10J1P30954 320 aa7.33□□□□□ -1.24
TDP1-204ENST00000545686 CHRNA7P36544 502 aa7.33□□□□□ -1.24
TDP1-204ENST00000545686 OR3A1P47881 315 aa7.33□□□□□ -1.24
TDP1-204ENST00000545686 GNB1P62873 340 aa7.33□□□□□ -1.24
TDP1-204ENST00000545686 ZNF766Q5HY98 468 aa7.33□□□□□ -1.24
TDP1-204ENST00000545686 ABHD17BQ5VST6 288 aa7.33□□□□□ -1.24
TDP1-204ENST00000545686 FAM216AQ8WUB2 273 aa7.33□□□□□ -1.24
TDP1-204ENST00000545686 ZDHHC16Q969W1 377 aa7.33□□□□□ -1.24
TDP1-204ENST00000545686 GMPPAQ96IJ6 420 aaPredicted RBP7.33□□□□□ -1.24
TDP1-204ENST00000545686 OR51B6Q9H340 312 aa7.33□□□□□ -1.24
TDP1-204ENST00000545686 TET2Q6N021 2002 aaPredicted RBP7.32□□□□□ -1.24
TDP1-204ENST00000545686 C15orf62A8K5M9 175 aa7.32□□□□□ -1.24
TDP1-204ENST00000545686 C17orf98A8MV24 154 aa7.32□□□□□ -1.24
TDP1-204ENST00000545686 IQCF6A8MYZ5 107 aa7.32□□□□□ -1.24
TDP1-204ENST00000545686 C3orf80F5H4A9 247 aa7.32□□□□□ -1.24
TDP1-204ENST00000545686 EREGO14944 169 aa7.32□□□□□ -1.24
TDP1-204ENST00000545686 SMPD2O60906 423 aa7.32□□□□□ -1.24
TDP1-204ENST00000545686 OR4A8P0C604 315 aa7.32□□□□□ -1.24
TDP1-204ENST00000545686 OPRK1P41145 380 aa7.32□□□□□ -1.24
TDP1-204ENST00000545686 MAGEA5P43359 124 aa7.32□□□□□ -1.24
TDP1-204ENST00000545686 BRWD1-AS2P59051 145 aa7.32□□□□□ -1.24
TDP1-204ENST00000545686 YPEL3P61236 119 aaPredicted RBP7.32□□□□□ -1.24
TDP1-204ENST00000545686 RPP30P78346 268 aaKnown RBP7.32□□□□□ -1.24
TDP1-204ENST00000545686 CLEC12BQ2HXU8 276 aa7.32□□□□□ -1.24
TDP1-204ENST00000545686 FBXW9Q5XUX1 488 aa7.32□□□□□ -1.24
TDP1-204ENST00000545686 PRR7Q8TB68 274 aa7.32□□□□□ -1.24
TDP1-204ENST00000545686 SFRP2Q96HF1 295 aa7.32□□□□□ -1.24
TDP1-204ENST00000545686 ELOVL5Q9NYP7 299 aa7.32□□□□□ -1.24
TDP1-204ENST00000545686 NAGKQ9UJ70 344 aa7.32□□□□□ -1.24
TDP1-204ENST00000545686 MDFIC2A0A1B0GVS7 189 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms