RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 RNPS1Q15287 305 aaKnown RBP7.47□□□□□ -1.21
ATXN3-216ENST00000545170 HARBI1Q96MB7 349 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 TRAV9-1A0A075B6T8 112 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 COX5BP10606 129 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 CCL5P13501 91 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 MFAP4P55083 255 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 SPRED2Q7Z698 418 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 OR1L8Q8NGR8 309 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 C10orf35Q96D05 121 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 HES7Q9BYE0 225 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 CXCL16Q9H2A7 254 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 LHX9Q9NQ69 397 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 IZUMO1RA6ND01 250 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 KLKB1P03952 638 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 UMODP07911 640 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 RAC3P60763 192 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 LPAL2Q16609 132 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 OR10J3Q5JRS4 329 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 AQP3Q92482 292 aa7.47□□□□□ -1.21
ATXN3-216ENST00000545170 IGKV3D-11A0A0A0MRZ8 115 aa7.46□□□□□ -1.21
ATXN3-216ENST00000545170 TRBV7-9A0A0J9YWB2 115 aa7.46□□□□□ -1.21
ATXN3-216ENST00000545170 COLCA2A8K830 154 aa7.46□□□□□ -1.21
ATXN3-216ENST00000545170 TMEM250H0YL14 139 aa7.46□□□□□ -1.21
ATXN3-216ENST00000545170 IGKV3-11P04433 115 aa7.46□□□□□ -1.21
ATXN3-216ENST00000545170 TMPRSS3P57727 454 aa7.46□□□□□ -1.21
ATXN3-216ENST00000545170 NXPH1P58417 271 aa7.46□□□□□ -1.21
ATXN3-216ENST00000545170 TBR1Q16650 682 aa7.46□□□□□ -1.21
ATXN3-216ENST00000545170 SPANXA1Q9NS26 97 aa7.46□□□□□ -1.21
ATXN3-216ENST00000545170 PATE4P0C8F1 98 aa7.46□□□□□ -1.21
ATXN3-216ENST00000545170 PNLIPP16233 465 aa7.46□□□□□ -1.21
ATXN3-216ENST00000545170 GCHFRP30047 84 aa7.46□□□□□ -1.21
ATXN3-216ENST00000545170 LEPP41159 167 aa7.46□□□□□ -1.21
ATXN3-216ENST00000545170 SERGEFQ9UGK8 458 aa7.46□□□□□ -1.21
ATXN3-216ENST00000545170 SHISA7A6NL88 538 aa7.46□□□□□ -1.22
ATXN3-216ENST00000545170 TSPOP30536 169 aa7.46□□□□□ -1.22
ATXN3-216ENST00000545170 PYY3Q5JQD4 70 aa7.46□□□□□ -1.22
ATXN3-216ENST00000545170 MRPL43Q8N983 215 aaKnown RBP7.46□□□□□ -1.22
ATXN3-216ENST00000545170 ZNF664Q8N3J9 261 aa7.46□□□□□ -1.22
ATXN3-216ENST00000545170 SLC25A38Q96DW6 304 aa7.46□□□□□ -1.22
ATXN3-216ENST00000545170 MRGPRX1Q96LB2 322 aa7.46□□□□□ -1.22
ATXN3-216ENST00000545170 ZNF714Q96N38 554 aa7.46□□□□□ -1.22
ATXN3-216ENST00000545170 ZNF793Q6ZN11 406 aa7.46□□□□□ -1.22
ATXN3-216ENST00000545170 LINC00596Q86U02 117 aa7.46□□□□□ -1.22
ATXN3-216ENST00000545170 OR13H1Q8NG92 308 aa7.46□□□□□ -1.22
ATXN3-216ENST00000545170 MRGPRX3Q96LB0 322 aa7.46□□□□□ -1.22
ATXN3-216ENST00000545170 TRBV5-4A0A0C4DH59 114 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 SERTM1A2A2V5 107 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 NKX2-2O95096 273 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 CXCL1P09341 107 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 ZNF708P17019 499 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 RPL23P62829 140 aaKnown RBP7.45□□□□□ -1.22
ATXN3-216ENST00000545170 GGTLC2Q14390 218 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 GOLT1AQ6ZVE7 132 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 OR6X1Q8NH79 312 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 ZNF764Q96H86 408 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-216ENST00000545170 C6orf106Q9H6K1 298 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-216ENST00000545170 CLEC1BQ9P126 229 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 ZNFX1Q9P2E3 1918 aaKnown RBP7.45□□□□□ -1.22
ATXN3-216ENST00000545170 TRAV2A0A0B4J234 112 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 ERVK11-1P61568 191 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 CYP2G1PQ6ZSU1 146 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 OR10J6PQ8NGY7 276 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 A0A087X0K7 114 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 SUMO2P61956 95 aaKnown RBP7.45□□□□□ -1.22
ATXN3-216ENST00000545170 TRA2AQ13595 282 aaKnown RBP eCLIP7.45□□□□□ -1.22
ATXN3-216ENST00000545170 ZNF645Q8N7E2 425 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 PATE1Q8WXA2 126 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 RAB1CQ92928 201 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 KIR2DL4Q99706 377 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 SCNM1Q9BWG6 230 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 SLC25A2Q9BXI2 301 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 RBMY1BA6NDE4 496 aaKnown RBP7.45□□□□□ -1.22
ATXN3-216ENST00000545170 RBMY1EA6NEQ0 496 aaKnown RBP7.45□□□□□ -1.22
ATXN3-216ENST00000545170 ADRA2AP08913 450 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 RBMY1DP0C7P1 496 aaKnown RBP7.45□□□□□ -1.22
ATXN3-216ENST00000545170 RBMY1A1P0DJD3 496 aaKnown RBP7.45□□□□□ -1.22
ATXN3-216ENST00000545170 RBMY1CP0DJD4 496 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 C8orf88P0DMB2 117 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 ICAM4Q14773 271 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 DNM1P46Q6ZS02 220 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 C1QL4Q86Z23 238 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 MFRPQ9BY79 579 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 RAB1BQ9H0U4 201 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 SLC25A10Q9UBX3 287 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-216ENST00000545170 MSGN1A6NI15 193 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 C17orf51A8MQB3 221 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 CDX4O14627 284 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-216ENST00000545170 ANKRD33Q7Z3H0 272 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 FBLIM1Q8WUP2 373 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 PGLYRP1O75594 196 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-216ENST00000545170 GABRG2P18507 467 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 ID1P41134 155 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 TMEM187Q14656 261 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 ATXN8Q156A1 80 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 PSMG4Q5JS54 123 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 C1orf43Q9BWL3 253 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 CHD5Q8TDI0 1954 aa7.45□□□□□ -1.22
ATXN3-216ENST00000545170 TRAV14DV4A0A0A6YYC5 116 aa7.44□□□□□ -1.22
ATXN3-216ENST00000545170 IGKV3OR2-268A0A0C4DH90 116 aa7.44□□□□□ -1.22
ATXN3-216ENST00000545170 TNFSF14O43557 240 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms