RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 C4orf3Q8WVX3 66 aa13.22□□□□□ -0.29
HOXD8-204ENST00000544999 DUX3Q96PT4 197 aa13.22□□□□□ -0.29
HOXD8-204ENST00000544999 DCSTAMPQ9H295 470 aa13.22□□□□□ -0.29
HOXD8-204ENST00000544999 SLC35D1Q9NTN3 355 aa13.22□□□□□ -0.29
HOXD8-204ENST00000544999 SDHAF2Q9NX18 166 aa13.22□□□□□ -0.29
HOXD8-204ENST00000544999 RHBDL2Q9NX52 303 aa13.22□□□□□ -0.29
HOXD8-204ENST00000544999 RBM7Q9Y580 266 aaKnown RBP13.22□□□□□ -0.29
HOXD8-204ENST00000544999 ETV7Q9Y603 341 aa13.22□□□□□ -0.29
HOXD8-204ENST00000544999 PRKDCP78527 4128 aaKnown RBP13.22□□□□□ -0.29
HOXD8-204ENST00000544999 IGKV1D-8A0A087WSZ0 117 aa13.21□□□□□ -0.29
HOXD8-204ENST00000544999 LINC00205P59089 165 aa13.21□□□□□ -0.29
HOXD8-204ENST00000544999 RPS16P62249 146 aaKnown RBP13.21□□□□□ -0.29
HOXD8-204ENST00000544999 TIMM50Q3ZCQ8 353 aa13.21□□□□□ -0.29
HOXD8-204ENST00000544999 C19orf54Q5BKX5 351 aa13.21□□□□□ -0.29
HOXD8-204ENST00000544999 TMEM65Q6PI78 240 aa13.21□□□□□ -0.29
HOXD8-204ENST00000544999 TCTEX1D1Q8N7M0 179 aa13.21□□□□□ -0.29
HOXD8-204ENST00000544999 MINDY2Q8NBR6 621 aa13.21□□□□□ -0.29
HOXD8-204ENST00000544999 FLYWCH2Q96CP2 140 aaKnown RBP13.21□□□□□ -0.29
HOXD8-204ENST00000544999 METTL1Q9UBP6 276 aaKnown RBP13.21□□□□□ -0.29
HOXD8-204ENST00000544999 FBXO7Q9Y3I1 522 aa13.21□□□□□ -0.29
HOXD8-204ENST00000544999 A0A087WXM4 84 aa13.2□□□□□ -0.3
HOXD8-204ENST00000544999 TMEM235A6NFC5 223 aa13.2□□□□□ -0.3
HOXD8-204ENST00000544999 FCN1O00602 326 aa13.2□□□□□ -0.3
HOXD8-204ENST00000544999 TMEM127O75204 238 aa13.2□□□□□ -0.3
HOXD8-204ENST00000544999 TNFAIP8O95379 198 aa13.2□□□□□ -0.3
HOXD8-204ENST00000544999 CTXN2P0C2S0 81 aa13.2□□□□□ -0.3
HOXD8-204ENST00000544999 GNG2P59768 71 aa13.2□□□□□ -0.3
HOXD8-204ENST00000544999 TAGLNQ01995 201 aaKnown RBP13.2□□□□□ -0.3
HOXD8-204ENST00000544999 ECSCRQ19T08 205 aa13.2□□□□□ -0.3
HOXD8-204ENST00000544999 DEFB136Q30KP8 78 aa13.2□□□□□ -0.3
HOXD8-204ENST00000544999 IDNKQ5T6J7 187 aa13.2□□□□□ -0.3
HOXD8-204ENST00000544999 ZNF562Q6V9R5 426 aa13.2□□□□□ -0.3
HOXD8-204ENST00000544999 ZNF491Q8N8L2 437 aa13.2□□□□□ -0.3
HOXD8-204ENST00000544999 NUDCD2Q8WVJ2 157 aa13.2□□□□□ -0.3
HOXD8-204ENST00000544999 DPF1Q92782 380 aa13.2□□□□□ -0.3
HOXD8-204ENST00000544999 C5orf30Q96GV9 206 aa13.2□□□□□ -0.3
HOXD8-204ENST00000544999 UBE2E2Q96LR5 201 aa13.2□□□□□ -0.3
HOXD8-204ENST00000544999 ST6GALNAC5Q9BVH7 336 aa13.2□□□□□ -0.3
HOXD8-204ENST00000544999 KLK15Q9H2R5 256 aa13.2□□□□□ -0.3
HOXD8-204ENST00000544999 VCX3AQ9NNX9 186 aa13.2□□□□□ -0.3
HOXD8-204ENST00000544999 NUBP2Q9Y5Y2 271 aa13.2□□□□□ -0.3
HOXD8-204ENST00000544999 A0A1W2PN81 502 aa13.19□□□□□ -0.3
HOXD8-204ENST00000544999 CA2P00918 260 aa13.19□□□□□ -0.3
HOXD8-204ENST00000544999 EGR2P11161 476 aaPredicted RBP13.19□□□□□ -0.3
HOXD8-204ENST00000544999 CHRNA7P36544 502 aa13.19□□□□□ -0.3
HOXD8-204ENST00000544999 RAB9AP51151 201 aa13.19□□□□□ -0.3
HOXD8-204ENST00000544999 EGFEM1PQ0D2K5 195 aa13.19□□□□□ -0.3
HOXD8-204ENST00000544999 TMEM267Q0VDI3 215 aaPredicted RBP13.19□□□□□ -0.3
HOXD8-204ENST00000544999 CBX3Q13185 183 aa13.19□□□□□ -0.3
HOXD8-204ENST00000544999 KIAA0141Q14154 515 aaPredicted RBP13.19□□□□□ -0.3
HOXD8-204ENST00000544999 TSPAN14Q8NG11 270 aa13.19□□□□□ -0.3
HOXD8-204ENST00000544999 OR5H6Q8NGV6 325 aa13.19□□□□□ -0.3
HOXD8-204ENST00000544999 ABHD5Q8WTS1 349 aa13.19□□□□□ -0.3
HOXD8-204ENST00000544999 SLC25A38Q96DW6 304 aa13.19□□□□□ -0.3
HOXD8-204ENST00000544999 CLCC1Q96S66 551 aa13.19□□□□□ -0.3
HOXD8-204ENST00000544999 FOXA2Q9Y261 457 aaPredicted RBP13.19□□□□□ -0.3
HOXD8-204ENST00000544999 VSIG4Q9Y279 399 aa13.19□□□□□ -0.3
HOXD8-204ENST00000544999 DNAH3Q8TD57 4116 aa13.19□□□□□ -0.3
HOXD8-204ENST00000544999 A0A0A6YYH2 397 aa13.18□□□□□ -0.3
HOXD8-204ENST00000544999 A6NJ64 397 aa13.18□□□□□ -0.3
HOXD8-204ENST00000544999 RRASP10301 218 aa13.18□□□□□ -0.3
HOXD8-204ENST00000544999 LGALS7P47929 136 aa13.18□□□□□ -0.3
HOXD8-204ENST00000544999 RAB25P57735 213 aa13.18□□□□□ -0.3
HOXD8-204ENST00000544999 KRTAP10-11P60412 298 aa13.18□□□□□ -0.3
HOXD8-204ENST00000544999 RUNX1Q01196 453 aa13.18□□□□□ -0.3
HOXD8-204ENST00000544999 FHL3Q13643 280 aa13.18□□□□□ -0.3
HOXD8-204ENST00000544999 CNIH2Q6PI25 160 aa13.18□□□□□ -0.3
HOXD8-204ENST00000544999 PPP1R27Q86WC6 154 aa13.18□□□□□ -0.3
HOXD8-204ENST00000544999 OR5M8Q8NGP6 311 aa13.18□□□□□ -0.3
HOXD8-204ENST00000544999 YIPF6Q96EC8 236 aa13.18□□□□□ -0.3
HOXD8-204ENST00000544999 ADTRPQ96IZ2 230 aa13.18□□□□□ -0.3
HOXD8-204ENST00000544999 SPATA2Q9UM82 520 aa13.18□□□□□ -0.3
HOXD8-204ENST00000544999 I3L521 148 aa13.17□□□□□ -0.3
HOXD8-204ENST00000544999 SLC25A17O43808 307 aa13.17□□□□□ -0.3
HOXD8-204ENST00000544999 SSX5O60225 188 aa13.17□□□□□ -0.3
HOXD8-204ENST00000544999 SOX15O60248 233 aa13.17□□□□□ -0.3
HOXD8-204ENST00000544999 IGLV2-23P01705 113 aa13.17□□□□□ -0.3
HOXD8-204ENST00000544999 HOXD3P31249 432 aaPredicted RBP13.17□□□□□ -0.3
HOXD8-204ENST00000544999 DUTP33316 252 aaKnown RBP13.17□□□□□ -0.3
HOXD8-204ENST00000544999 RTL8BQ17RB0 113 aa13.17□□□□□ -0.3
HOXD8-204ENST00000544999 AKIRIN2Q53H80 203 aa13.17□□□□□ -0.3
HOXD8-204ENST00000544999 TMEM177Q53S58 311 aa13.17□□□□□ -0.3
HOXD8-204ENST00000544999 CROCCP3Q8IVE0 287 aa13.17□□□□□ -0.3
HOXD8-204ENST00000544999 BVESQ8NE79 360 aa13.17□□□□□ -0.3
HOXD8-204ENST00000544999 OR11H1Q8NG94 326 aa13.17□□□□□ -0.3
HOXD8-204ENST00000544999 DDB2Q92466 427 aa13.17□□□□□ -0.3
HOXD8-204ENST00000544999 HARBI1Q96MB7 349 aa13.17□□□□□ -0.3
HOXD8-204ENST00000544999 GNB4Q9HAV0 340 aa13.17□□□□□ -0.3
HOXD8-204ENST00000544999 TPSG1Q9NRR2 321 aa13.17□□□□□ -0.3
HOXD8-204ENST00000544999 OR2W1Q9Y3N9 320 aa13.17□□□□□ -0.3
HOXD8-204ENST00000544999 A3GALT2U3KPV4 340 aa13.17□□□□□ -0.3
HOXD8-204ENST00000544999 TRAV18A0A075B6X5 111 aa13.16□□□□□ -0.3
HOXD8-204ENST00000544999 AIREO43918 545 aa13.16□□□□□ -0.3
HOXD8-204ENST00000544999 CRYGBP07316 175 aa13.16□□□□□ -0.3
HOXD8-204ENST00000544999 NFYAP23511 347 aaPredicted RBP13.16□□□□□ -0.3
HOXD8-204ENST00000544999 LUMP51884 338 aaPredicted RBP13.16□□□□□ -0.3
HOXD8-204ENST00000544999 PYHIN1Q6K0P9 492 aa13.16□□□□□ -0.3
HOXD8-204ENST00000544999 UNQ5815/PRO19632Q6UWF5 114 aa13.16□□□□□ -0.3
HOXD8-204ENST00000544999 ZNF645Q8N7E2 425 aa13.16□□□□□ -0.3
HOXD8-204ENST00000544999 ARPC1AQ92747 370 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms