RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 MINDY2Q8NBR6 621 aa8.94□□□□□ -0.98
YBX3-216ENST00000544622 FBXL15Q9H469 300 aa8.94□□□□□ -0.98
YBX3-216ENST00000544622 DIABLOQ9NR28 239 aa8.94□□□□□ -0.98
YBX3-216ENST00000544622 FBXO7Q9Y3I1 522 aa8.94□□□□□ -0.98
YBX3-216ENST00000544622 SRRM4A7MD48 611 aaKnown RBP8.93□□□□□ -0.98
YBX3-216ENST00000544622 LINC00473A8K010 186 aa8.93□□□□□ -0.98
YBX3-216ENST00000544622 G3V318 75 aa8.93□□□□□ -0.98
YBX3-216ENST00000544622 H7C2Y5 167 aa8.93□□□□□ -0.98
YBX3-216ENST00000544622 M0R1X1 148 aa8.93□□□□□ -0.98
YBX3-216ENST00000544622 ATP6V0E1O15342 81 aa8.93□□□□□ -0.98
YBX3-216ENST00000544622 GABARAPO95166 117 aa8.93□□□□□ -0.98
YBX3-216ENST00000544622 SPDEFO95238 335 aa8.93□□□□□ -0.98
YBX3-216ENST00000544622 IGLV2-23P01705 113 aa8.93□□□□□ -0.98
YBX3-216ENST00000544622 RPLP1P05386 114 aaKnown RBP8.93□□□□□ -0.98
YBX3-216ENST00000544622 CRYGBP07316 175 aa8.93□□□□□ -0.98
YBX3-216ENST00000544622 OR5H8P0DN80 308 aa8.93□□□□□ -0.98
YBX3-216ENST00000544622 DUTP33316 252 aaKnown RBP8.93□□□□□ -0.98
YBX3-216ENST00000544622 THBS3P49746 956 aa8.93□□□□□ -0.98
YBX3-216ENST00000544622 VBP1P61758 197 aa8.93□□□□□ -0.98
YBX3-216ENST00000544622 SSBP2P81877 361 aaPredicted RBP8.93□□□□□ -0.98
YBX3-216ENST00000544622 TAGLNQ01995 201 aaKnown RBP8.93□□□□□ -0.98
YBX3-216ENST00000544622 EIF4EBP1Q13541 118 aaPredicted RBP8.93□□□□□ -0.98
YBX3-216ENST00000544622 OXLD1Q5BKU9 147 aa8.93□□□□□ -0.98
YBX3-216ENST00000544622 ZNF562Q6V9R5 426 aa8.93□□□□□ -0.98
YBX3-216ENST00000544622 ANKRD13BQ86YJ7 626 aa8.93□□□□□ -0.98
YBX3-216ENST00000544622 GVQW1Q8N7I0 195 aa8.93□□□□□ -0.98
YBX3-216ENST00000544622 FLYWCH2Q96CP2 140 aaKnown RBP8.93□□□□□ -0.98
YBX3-216ENST00000544622 KCTD12Q96CX2 325 aaKnown RBP8.93□□□□□ -0.98
YBX3-216ENST00000544622 S100A16Q96FQ6 103 aaKnown RBP8.93□□□□□ -0.98
YBX3-216ENST00000544622 P2RX4Q99571 388 aa8.93□□□□□ -0.98
YBX3-216ENST00000544622 GINS4Q9BRT9 223 aa8.93□□□□□ -0.98
YBX3-216ENST00000544622 KIAA1456Q9P272 454 aa8.93□□□□□ -0.98
YBX3-216ENST00000544622 OR2W1Q9Y3N9 320 aa8.93□□□□□ -0.98
YBX3-216ENST00000544622 NUBP2Q9Y5Y2 271 aa8.93□□□□□ -0.98
YBX3-216ENST00000544622 TGP01266 2768 aa8.93□□□□□ -0.98
YBX3-216ENST00000544622 IGKV1D-13A0A0B4J2D9 117 aa8.92□□□□□ -0.98
YBX3-216ENST00000544622 IGKV1-13P0DP09 117 aa8.92□□□□□ -0.98
YBX3-216ENST00000544622 PF4V1P10720 104 aa8.92□□□□□ -0.98
YBX3-216ENST00000544622 PTHLHP12272 177 aa8.92□□□□□ -0.98
YBX3-216ENST00000544622 VDAC1P21796 283 aa8.92□□□□□ -0.98
YBX3-216ENST00000544622 NFYAP23511 347 aaPredicted RBP8.92□□□□□ -0.98
YBX3-216ENST00000544622 LGALS7P47929 136 aa8.92□□□□□ -0.98
YBX3-216ENST00000544622 ALDH3B2P48448 385 aa8.92□□□□□ -0.98
YBX3-216ENST00000544622 MRGPRG-AS1Q2M3A8 158 aa8.92□□□□□ -0.98
YBX3-216ENST00000544622 PDLIM3Q53GG5 364 aaPredicted RBP8.92□□□□□ -0.98
YBX3-216ENST00000544622 TMEM177Q53S58 311 aa8.92□□□□□ -0.98
YBX3-216ENST00000544622 UBE2NLQ5JXB2 153 aa8.92□□□□□ -0.98
YBX3-216ENST00000544622 LCNL1Q6ZST4 164 aa8.92□□□□□ -0.98
YBX3-216ENST00000544622 C1QL4Q86Z23 238 aa8.92□□□□□ -0.98
YBX3-216ENST00000544622 ZNF695Q8IW36 515 aa8.92□□□□□ -0.98
YBX3-216ENST00000544622 ZNF645Q8N7E2 425 aa8.92□□□□□ -0.98
YBX3-216ENST00000544622 LINC00482Q8N8I6 264 aa8.92□□□□□ -0.98
YBX3-216ENST00000544622 BEST4Q8NFU0 473 aa8.92□□□□□ -0.98
YBX3-216ENST00000544622 SNAPC3Q92966 411 aa8.92□□□□□ -0.98
YBX3-216ENST00000544622 CMTM3Q96MX0 182 aa8.92□□□□□ -0.98
YBX3-216ENST00000544622 NAA50Q9GZZ1 169 aaKnown RBP8.92□□□□□ -0.98
YBX3-216ENST00000544622 KLK15Q9H2R5 256 aa8.92□□□□□ -0.98
YBX3-216ENST00000544622 SLC35D1Q9NTN3 355 aa8.92□□□□□ -0.98
YBX3-216ENST00000544622 ANAPC10Q9UM13 185 aa8.92□□□□□ -0.98
YBX3-216ENST00000544622 TRAV41A0A0B4J266 112 aa8.91□□□□□ -0.98
YBX3-216ENST00000544622 SOX15O60248 233 aa8.91□□□□□ -0.98
YBX3-216ENST00000544622 APOA2P02652 100 aa8.91□□□□□ -0.98
YBX3-216ENST00000544622 MYCNOSP40205 109 aa8.91□□□□□ -0.98
YBX3-216ENST00000544622 BRWD1-AS2P59051 145 aa8.91□□□□□ -0.98
YBX3-216ENST00000544622 RPS16P62249 146 aaKnown RBP8.91□□□□□ -0.98
YBX3-216ENST00000544622 AKIRIN2Q53H80 203 aa8.91□□□□□ -0.98
YBX3-216ENST00000544622 CXorf66Q5JRM2 361 aaPredicted RBP8.91□□□□□ -0.98
YBX3-216ENST00000544622 C8orf86Q6ZUL3 223 aa8.91□□□□□ -0.98
YBX3-216ENST00000544622 OVCH2Q7RTZ1 564 aa8.91□□□□□ -0.98
YBX3-216ENST00000544622 MRPL41Q8IXM3 137 aaKnown RBP8.91□□□□□ -0.98
YBX3-216ENST00000544622 SAMD12Q8N8I0 201 aa8.91□□□□□ -0.98
YBX3-216ENST00000544622 ADTRPQ96IZ2 230 aa8.91□□□□□ -0.98
YBX3-216ENST00000544622 TSNAXQ99598 290 aaKnown RBP8.91□□□□□ -0.98
YBX3-216ENST00000544622 METTL1Q9UBP6 276 aaKnown RBP8.91□□□□□ -0.98
YBX3-216ENST00000544622 WSB1Q9Y6I7 421 aa8.91□□□□□ -0.98
YBX3-216ENST00000544622 SLC22A5O76082 557 aa8.9□□□□□ -0.98
YBX3-216ENST00000544622 PF4P02776 101 aa8.9□□□□□ -0.98
YBX3-216ENST00000544622 RRASP10301 218 aa8.9□□□□□ -0.98
YBX3-216ENST00000544622 IGLL1P15814 213 aa8.9□□□□□ -0.98
YBX3-216ENST00000544622 NAT1P18440 290 aa8.9□□□□□ -0.98
YBX3-216ENST00000544622 CBX5P45973 191 aa8.9□□□□□ -0.98
YBX3-216ENST00000544622 RAB9AP51151 201 aa8.9□□□□□ -0.98
YBX3-216ENST00000544622 LUMP51884 338 aaPredicted RBP8.9□□□□□ -0.98
YBX3-216ENST00000544622 RPL30P62888 115 aaKnown RBP8.9□□□□□ -0.98
YBX3-216ENST00000544622 MSMO1Q15800 293 aa8.9□□□□□ -0.98
YBX3-216ENST00000544622 KHDC1LQ5JSQ8 128 aa8.9□□□□□ -0.98
YBX3-216ENST00000544622 PPP1R27Q86WC6 154 aa8.9□□□□□ -0.98
YBX3-216ENST00000544622 TCTEX1D1Q8N7M0 179 aa8.9□□□□□ -0.98
YBX3-216ENST00000544622 ZNF491Q8N8L2 437 aa8.9□□□□□ -0.98
YBX3-216ENST00000544622 BVESQ8NE79 360 aa8.9□□□□□ -0.98
YBX3-216ENST00000544622 KLHL30-AS1Q8NEE0 82 aa8.9□□□□□ -0.98
YBX3-216ENST00000544622 OR5AP2Q8NGF4 316 aa8.9□□□□□ -0.98
YBX3-216ENST00000544622 GIMAP1Q8WWP7 306 aa8.9□□□□□ -0.98
YBX3-216ENST00000544622 RAX2Q96IS3 184 aa8.9□□□□□ -0.98
YBX3-216ENST00000544622 UBE2E2Q96LR5 201 aa8.9□□□□□ -0.98
YBX3-216ENST00000544622 MRPS26Q9BYN8 205 aaKnown RBP8.9□□□□□ -0.98
YBX3-216ENST00000544622 PARP11Q9NR21 331 aa8.9□□□□□ -0.98
YBX3-216ENST00000544622 TPSG1Q9NRR2 321 aa8.9□□□□□ -0.98
YBX3-216ENST00000544622 RBMX2Q9Y388 322 aaKnown RBP8.9□□□□□ -0.98
YBX3-216ENST00000544622 RBM7Q9Y580 266 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms