RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 LINC01587Q99440 93 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 APOL4Q9BPW4 351 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 SUCNR1Q9BXA5 334 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 ARL6Q9H0F7 186 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 LRRC19Q9H756 370 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 STMN3Q9NZ72 180 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 CHTOPQ9Y3Y2 248 aaKnown RBP0.83□□□□□ -2.28
YBX3-214ENST00000544501 PHLDA3Q9Y5J5 127 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 BZW2Q9Y6E2 419 aaKnown RBP0.83□□□□□ -2.28
YBX3-214ENST00000544501 COL7A1Q02388 2944 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.83□□□□□ -2.282e-6■■■■□ 23.2
YBX3-214ENST00000544501 UBR2Q8IWV8 1755 aa0.83□□□□□ -2.28
YBX3-214ENST00000544501 PSME4Q14997 1843 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 ATG2AQ2TAZ0 1938 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 MIA3Q5JRA6 1907 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 IGHV3OR15-7A0A075B7D8 119 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 A0A1B0GTI1 187 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 H3BP45 60 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 LY6LH3BQJ8 138 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 KLRC4-KLRK1H3BQV0 150 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 I3L4J1 428 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 LECT2O14960 151 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 UBDO15205 165 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 PDCD6O75340 191 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 SC5DO75845 299 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 S1PR2O95136 353 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 GIMD1P0DJR0 217 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 OR12D1P0DN82 309 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 PTNP21246 168 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 PSMB9P28065 219 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 RANBP1P43487 201 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 CBX5P45973 191 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 PLTPP55058 493 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 RAB25P57735 213 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 HBG1P69891 147 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 HBG2P69892 147 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 CAVIN4Q5BKX8 364 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 ACSBG2Q5FVE4 666 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 C6orf183Q5T699 404 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 LAMTOR1Q6IAA8 161 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 C10orf107Q8IVU9 208 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 KRTCAP2Q8N6L1 136 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 OR4K17Q8NGC6 315 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 GPR119Q8TDV5 335 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 KCTD4Q8WVF5 259 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 OPTNQ96CV9 577 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 REEP6Q96HR9 211 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 GLT1D1Q96MS3 346 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 METTL8Q9H825 291 aaKnown RBP0.82□□□□□ -2.28
YBX3-214ENST00000544501 RMND1Q9NWS8 449 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 SLC23A2Q9UGH3 650 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 PSORS1C2Q9UIG4 136 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 POMPQ9Y244 141 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 HSPE1-MOB4S4R3N1 261 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 SCN9AQ15858 1988 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 CMYA5Q8N3K9 4069 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 HMCN2Q8NDA2 5059 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 ANK3Q12955 4377 aaKnown RBP0.82□□□□□ -2.28
YBX3-214ENST00000544501 MUC22E2RYF6 1773 aaPredicted RBP0.82□□□□□ -2.28
YBX3-214ENST00000544501 HECTD4Q9Y4D8 3996 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 PLXNB2O15031 1838 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 PATJQ8NI35 1801 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 RTL9Q8NET4 1388 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 CDK5RAP2Q96SN8 1893 aa0.82□□□□□ -2.28
YBX3-214ENST00000544501 URB1O60287 2271 aaKnown RBP0.81□□□□□ -2.28
YBX3-214ENST00000544501 DOCK3Q8IZD9 2030 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 ECM29Q5VYK3 1845 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 PCNX2A6NKB5 2137 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 FAM183AA6NL82 134 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 C17orf98A8MV24 154 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 F5H5T6 163 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 H0YC42 278 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 hCG_2039718K7EN88 272 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 EEF1E1O43324 174 aaKnown RBP0.81□□□□□ -2.28
YBX3-214ENST00000544501 DENRO43583 198 aaKnown RBP0.81□□□□□ -2.28
YBX3-214ENST00000544501 P0DMU3 169 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 FAM231AP0DMU4 169 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 FAM231CP0DMU5 169 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 S100A2P29034 98 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 CRABP1P29762 137 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 TSPOP30536 169 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 EVI2BP34910 448 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 RPA3P35244 121 aaPredicted RBP0.81□□□□□ -2.28
YBX3-214ENST00000544501 COILP38432 576 aaPredicted RBP0.81□□□□□ -2.28
YBX3-214ENST00000544501 INPP1P49441 399 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 ATP5J2P56134 94 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 RHOAP61586 193 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 TSPAN5P62079 268 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 CEACAM21Q3KPI0 293 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 TMEM176BQ3YBM2 270 aaPredicted RBP0.81□□□□□ -2.28
YBX3-214ENST00000544501 FAM162BQ5T6X4 162 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 HBMQ6B0K9 141 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 ELP2Q6IA86 826 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 NIPAL1Q6NVV3 410 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 CLEC20AQ6ZU45 233 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 SSX6Q7RTT6 188 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 OLIG3Q7RTU3 272 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 SCXQ7RTU7 201 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 OR11G2Q8NGC1 345 aa0.81□□□□□ -2.28
YBX3-214ENST00000544501 OR10P1Q8NGE3 313 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms