RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 DDB2Q92466 427 aa24.8■■□□□ 1.56
CCM2-219ENST00000544363 PTPN13Q12923 2485 aa24.8■■□□□ 1.56
CCM2-219ENST00000544363 IGLV1-47P01700 117 aa24.79■■□□□ 1.56
CCM2-219ENST00000544363 SLC25A16P16260 332 aa24.79■■□□□ 1.56
CCM2-219ENST00000544363 ZNF137PP52743 207 aa24.79■■□□□ 1.56
CCM2-219ENST00000544363 ZNF816Q0VGE8 651 aaPredicted RBP24.79■■□□□ 1.56
CCM2-219ENST00000544363 FAM71F2Q6NXP2 309 aa24.79■■□□□ 1.56
CCM2-219ENST00000544363 ZBTB8BQ8NAP8 495 aaPredicted RBP24.79■■□□□ 1.56
CCM2-219ENST00000544363 BEND2Q8NDZ0 799 aa24.79■■□□□ 1.56
CCM2-219ENST00000544363 OR13D1Q8NGV5 346 aa24.79■■□□□ 1.56
CCM2-219ENST00000544363 TMEM186Q96B77 213 aa24.79■■□□□ 1.56
CCM2-219ENST00000544363 MMP26Q9NRE1 261 aa24.79■■□□□ 1.56
CCM2-219ENST00000544363 TRAV14DV4A0A0A6YYC5 116 aa24.79■■□□□ 1.56
CCM2-219ENST00000544363 KIR2DS2P43631 304 aa24.79■■□□□ 1.56
CCM2-219ENST00000544363 PRB3Q04118 309 aaPredicted RBP24.79■■□□□ 1.56
CCM2-219ENST00000544363 SIRT7Q9NRC8 400 aa24.79■■□□□ 1.56
CCM2-219ENST00000544363 FCGR3BO75015 233 aa24.78■■□□□ 1.56
CCM2-219ENST00000544363 COX7A1P24310 79 aa24.78■■□□□ 1.56
CCM2-219ENST00000544363 IL3RAP26951 378 aa24.78■■□□□ 1.56
CCM2-219ENST00000544363 HLA-DRB5Q30154 266 aa24.78■■□□□ 1.56
CCM2-219ENST00000544363 LRRC37A5PQ49AS3 106 aa24.78■■□□□ 1.56
CCM2-219ENST00000544363 LSM10Q969L4 123 aaKnown RBP24.78■■□□□ 1.56
CCM2-219ENST00000544363 ST6GALNAC6Q969X2 333 aa24.78■■□□□ 1.56
CCM2-219ENST00000544363 RBFOX2O43251 390 aaKnown RBP eCLIP24.77■■□□□ 1.565e-6■■■■■ 29.4
CCM2-219ENST00000544363 S1PR2O95136 353 aa24.77■■□□□ 1.56
CCM2-219ENST00000544363 CT45A6P0DMU7 189 aa24.77■■□□□ 1.56
CCM2-219ENST00000544363 CT45A5P0DMU8 189 aa24.77■■□□□ 1.56
CCM2-219ENST00000544363 CT45A7P0DMV0 189 aa24.77■■□□□ 1.56
CCM2-219ENST00000544363 PSMB6P28072 239 aa24.77■■□□□ 1.56
CCM2-219ENST00000544363 PNKDQ8N490 385 aa24.77■■□□□ 1.56
CCM2-219ENST00000544363 ZNF383Q8NA42 475 aa24.77■■□□□ 1.56
CCM2-219ENST00000544363 SPIN2AQ99865 258 aa24.77■■□□□ 1.56
CCM2-219ENST00000544363 SPIN2BQ9BPZ2 258 aa24.77■■□□□ 1.56
CCM2-219ENST00000544363 UNKLQ9H9P5 680 aaKnown RBP24.77■■□□□ 1.56
CCM2-219ENST00000544363 MPC2O95563 127 aa24.76■■□□□ 1.55
CCM2-219ENST00000544363 IGKV1-5P01602 117 aa24.76■■□□□ 1.55
CCM2-219ENST00000544363 RNASE11Q8TAA1 199 aaKnown RBP24.76■■□□□ 1.55
CCM2-219ENST00000544363 MBD6Q96DN6 1003 aa24.76■■□□□ 1.55
CCM2-219ENST00000544363 HEXA-AS1Q9H8Q6 139 aa24.76■■□□□ 1.55
CCM2-219ENST00000544363 AKR1C2P52895 323 aa24.75■■□□□ 1.55
CCM2-219ENST00000544363 GPR146Q96CH1 333 aa24.75■■□□□ 1.55
CCM2-219ENST00000544363 RRNAD1Q96FB5 475 aaKnown RBP24.75■■□□□ 1.55
CCM2-219ENST00000544363 SIRPDQ9H106 197 aa24.75■■□□□ 1.55
CCM2-219ENST00000544363 A0A0G2JRQ6 117 aa24.75■■□□□ 1.55
CCM2-219ENST00000544363 ATG12O94817 140 aa24.75■■□□□ 1.55
CCM2-219ENST00000544363 HPRT1P00492 218 aa24.75■■□□□ 1.55
CCM2-219ENST00000544363 OR11H6Q8NGC7 330 aa24.75■■□□□ 1.55
CCM2-219ENST00000544363 GRPEL2Q8TAA5 225 aa24.75■■□□□ 1.55
CCM2-219ENST00000544363 PLEKHA2Q9HB19 425 aa24.75■■□□□ 1.55
CCM2-219ENST00000544363 USF1P22415 310 aaPredicted RBP24.74■■□□□ 1.55
CCM2-219ENST00000544363 THOC7Q6I9Y2 204 aaKnown RBP24.74■■□□□ 1.55
CCM2-219ENST00000544363 C11orf87Q6NUJ2 197 aa24.74■■□□□ 1.55
CCM2-219ENST00000544363 VMO1Q7Z5L0 202 aa24.74■■□□□ 1.55
CCM2-219ENST00000544363 MRPL20Q9BYC9 149 aaKnown RBP24.74■■□□□ 1.55
CCM2-219ENST00000544363 LPAR2Q9HBW0 351 aa24.74■■□□□ 1.55
CCM2-219ENST00000544363 BUB1B-PAK6H3BSN5 160 aa24.73■■□□□ 1.55
CCM2-219ENST00000544363 SLC25A4P12235 298 aa24.73■■□□□ 1.55
CCM2-219ENST00000544363 SLC25A6P12236 298 aa24.73■■□□□ 1.55
CCM2-219ENST00000544363 DVL1P1P54792 670 aaPredicted RBP24.73■■□□□ 1.55
CCM2-219ENST00000544363 RAB32Q13637 225 aa24.73■■□□□ 1.55
CCM2-219ENST00000544363 DIAPH2-AS1Q14236 149 aa24.73■■□□□ 1.55
CCM2-219ENST00000544363 HCP5Q6MZN7 132 aa24.73■■□□□ 1.55
CCM2-219ENST00000544363 OR4P4Q8NGL7 312 aa24.73■■□□□ 1.55
CCM2-219ENST00000544363 OR4S2Q8NH73 311 aa24.73■■□□□ 1.55
CCM2-219ENST00000544363 AMMECR1Q9Y4X0 333 aaPredicted RBP24.73■■□□□ 1.55
CCM2-219ENST00000544363 FXYD6-FXYD2A0A087WZ82 144 aa24.72■■□□□ 1.55
CCM2-219ENST00000544363 A0A1B0GU03 582 aa24.72■■□□□ 1.55
CCM2-219ENST00000544363 KRASP01116 189 aa24.72■■□□□ 1.55
CCM2-219ENST00000544363 OR4D5Q8NGN0 318 aa24.72■■□□□ 1.55
CCM2-219ENST00000544363 THAP6Q8TBB0 222 aa24.72■■□□□ 1.55
CCM2-219ENST00000544363 CENPEQ02224 2701 aa24.72■■□□□ 1.55
CCM2-219ENST00000544363 MED13LQ71F56 2210 aa24.72■■□□□ 1.55
CCM2-219ENST00000544363 HMSDA8MTL9 139 aa24.72■■□□□ 1.55
CCM2-219ENST00000544363 MMP9P14780 707 aa24.72■■□□□ 1.55
CCM2-219ENST00000544363 G6PCP35575 357 aa24.72■■□□□ 1.55
CCM2-219ENST00000544363 REG1BP48304 166 aa24.72■■□□□ 1.55
CCM2-219ENST00000544363 TGIF2LXQ8IUE1 241 aa24.72■■□□□ 1.55
CCM2-219ENST00000544363 FAM219AQ8IW50 185 aa24.72■■□□□ 1.55
CCM2-219ENST00000544363 MMP24Q9Y5R2 645 aa24.72■■□□□ 1.55
CCM2-219ENST00000544363 ANKRD17O75179 2603 aaKnown RBP24.71■■□□□ 1.55
CCM2-219ENST00000544363 EPHA1P21709 976 aa24.71■■□□□ 1.55
CCM2-219ENST00000544363 TAGLNQ01995 201 aaKnown RBP24.71■■□□□ 1.55
CCM2-219ENST00000544363 KLRD1Q13241 179 aa24.71■■□□□ 1.55
CCM2-219ENST00000544363 LAMTOR1Q6IAA8 161 aa24.71■■□□□ 1.55
CCM2-219ENST00000544363 C9orf62Q8N4C0 152 aa24.71■■□□□ 1.55
CCM2-219ENST00000544363 NABP2Q9BQ15 211 aa24.71■■□□□ 1.55
CCM2-219ENST00000544363 INSIG2Q9Y5U4 225 aa24.71■■□□□ 1.55
CCM2-219ENST00000544363 TOX4O94842 621 aa24.7■■□□□ 1.54
CCM2-219ENST00000544363 ARG1P05089 322 aa24.7■■□□□ 1.54
CCM2-219ENST00000544363 S100A10P60903 97 aa24.7■■□□□ 1.54
CCM2-219ENST00000544363 R3HDM4Q96D70 268 aa24.7■■□□□ 1.54
CCM2-219ENST00000544363 RNF126Q9BV68 326 aa24.7■■□□□ 1.54
CCM2-219ENST00000544363 SLC35D1Q9NTN3 355 aa24.7■■□□□ 1.54
CCM2-219ENST00000544363 MBD2Q9UBB5 411 aa24.7■■□□□ 1.54
CCM2-219ENST00000544363 H0YIZ8 118 aa24.69■■□□□ 1.54
CCM2-219ENST00000544363 SCGB1D2O95969 90 aa24.69■■□□□ 1.54
CCM2-219ENST00000544363 MBPP02686 304 aaPredicted RBP24.69■■□□□ 1.54
CCM2-219ENST00000544363 P0C879 139 aa24.69■■□□□ 1.54
CCM2-219ENST00000544363 SMCO1Q147U7 214 aa24.69■■□□□ 1.54
CCM2-219ENST00000544363 RTL8BQ17RB0 113 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms