RNA–Protein interactions for RNA: ENST00000544301.6

VIM-209, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best)

Gene VIM, Length 2,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-209ENST00000544301 ZG16O60844 167 aa14.98□□□□□ -0.01
VIM-209ENST00000544301 PROP1O75360 226 aa14.98□□□□□ -0.01
VIM-209ENST00000544301 GPR12P47775 334 aa14.98□□□□□ -0.01
VIM-209ENST00000544301 MORN2Q502X0 79 aa14.98□□□□□ -0.01
VIM-209ENST00000544301 NCR3LG1Q68D85 454 aa14.98□□□□□ -0.01
VIM-209ENST00000544301 PPP1R35Q8TAP8 253 aa14.98□□□□□ -0.01
VIM-209ENST00000544301 ZDHHC16Q969W1 377 aa14.98□□□□□ -0.01
VIM-209ENST00000544301 AKAP13Q12802 2813 aa14.98□□□□□ -0.01
VIM-209ENST00000544301 PMS2P5A8MQ11 134 aa14.98□□□□□ -0.01
VIM-209ENST00000544301 LHBP01229 141 aa14.98□□□□□ -0.01
VIM-209ENST00000544301 CRYABP02511 175 aaKnown RBP14.98□□□□□ -0.01
VIM-209ENST00000544301 RAB5AP20339 215 aa14.98□□□□□ -0.01
VIM-209ENST00000544301 RPL35P42766 123 aaKnown RBP14.98□□□□□ -0.01
VIM-209ENST00000544301 AKR1D1P51857 326 aa14.98□□□□□ -0.01
VIM-209ENST00000544301 FGF8P55075 233 aaPredicted RBP14.98□□□□□ -0.01
VIM-209ENST00000544301 ELLP55199 621 aaPredicted RBP14.98□□□□□ -0.01
VIM-209ENST00000544301 ZNRF1Q8ND25 227 aa14.98□□□□□ -0.01
VIM-209ENST00000544301 OR10G4Q8NGN3 311 aa14.98□□□□□ -0.01
VIM-209ENST00000544301 PINX1Q96BK5 328 aaKnown RBP14.98□□□□□ -0.01
VIM-209ENST00000544301 PLPPR2Q96GM1 343 aa14.98□□□□□ -0.01
VIM-209ENST00000544301 ZNF665Q9H7R5 613 aa14.98□□□□□ -0.01
VIM-209ENST00000544301 CISD1Q9NZ45 108 aaKnown RBP14.98□□□□□ -0.01
VIM-209ENST00000544301 GNG12Q9UBI6 72 aa14.98□□□□□ -0.01
VIM-209ENST00000544301 JPT1Q9UK76 154 aa14.98□□□□□ -0.01
VIM-209ENST00000544301 TIMM9Q9Y5J7 89 aa14.98□□□□□ -0.01
VIM-209ENST00000544301 IGLV3-9A0A075B6K5 115 aa14.97□□□□□ -0.01
VIM-209ENST00000544301 hCG_1809904A0A1W2PP81 198 aa14.97□□□□□ -0.01
VIM-209ENST00000544301 A0A1W2PR64 198 aa14.97□□□□□ -0.01
VIM-209ENST00000544301 A0A1W2PRV1 198 aa14.97□□□□□ -0.01
VIM-209ENST00000544301 MARCH11A6NNE9 402 aa14.97□□□□□ -0.01
VIM-209ENST00000544301 OR2C1O95371 312 aa14.97□□□□□ -0.01
VIM-209ENST00000544301 AGAP20933 346 aa14.97□□□□□ -0.01
VIM-209ENST00000544301 DUTP33316 252 aaKnown RBP14.97□□□□□ -0.01
VIM-209ENST00000544301 ATP6V1FQ16864 119 aa14.97□□□□□ -0.01
VIM-209ENST00000544301 CENPVQ7Z7K6 275 aaPredicted RBP14.97□□□□□ -0.01
VIM-209ENST00000544301 ZNF561Q8N587 486 aa14.97□□□□□ -0.01
VIM-209ENST00000544301 ITLN1Q8WWA0 313 aa14.97□□□□□ -0.01
VIM-209ENST00000544301 YPEL4Q96NS1 127 aa14.97□□□□□ -0.01
VIM-209ENST00000544301 SFXN3Q9BWM7 321 aa14.97□□□□□ -0.01
VIM-209ENST00000544301 MRPL37Q9BZE1 423 aaKnown RBP14.97□□□□□ -0.01
VIM-209ENST00000544301 ZFP92A6NM28 416 aa14.96□□□□□ -0.01
VIM-209ENST00000544301 KLK10O43240 276 aa14.96□□□□□ -0.01
VIM-209ENST00000544301 YPEL1O60688 119 aa14.96□□□□□ -0.01
VIM-209ENST00000544301 BCL2P10415 239 aa14.96□□□□□ -0.01
VIM-209ENST00000544301 PRSS33Q8NF86 280 aa14.96□□□□□ -0.01
VIM-209ENST00000544301 CIB3Q96Q77 187 aaPredicted RBP14.96□□□□□ -0.01
VIM-209ENST00000544301 YPEL2Q96QA6 119 aa14.96□□□□□ -0.01
VIM-209ENST00000544301 TMEM147Q9BVK8 224 aa14.96□□□□□ -0.01
VIM-209ENST00000544301 CADP27708 2225 aa14.96□□□□□ -0.01
VIM-209ENST00000544301 RBMXL2O75526 392 aaKnown RBP14.96□□□□□ -0.01
VIM-209ENST00000544301 CEACAM8P31997 349 aaPredicted RBP14.96□□□□□ -0.01
VIM-209ENST00000544301 MAS1LP35410 378 aa14.96□□□□□ -0.01
VIM-209ENST00000544301 TAGLN2P37802 199 aaKnown RBP14.96□□□□□ -0.01
VIM-209ENST00000544301 LOXL3P58215 753 aa14.96□□□□□ -0.01
VIM-209ENST00000544301 DLK1P80370 383 aa14.96□□□□□ -0.01
VIM-209ENST00000544301 R3HDM4Q96D70 268 aa14.96□□□□□ -0.01
VIM-209ENST00000544301 TVP23CQ96ET8 276 aa14.96□□□□□ -0.01
VIM-209ENST00000544301 NIPSNAP3BQ9BS92 247 aa14.96□□□□□ -0.01
VIM-209ENST00000544301 F2RL2O00254 374 aa14.95□□□□□ -0.02
VIM-209ENST00000544301 SPINK9Q5DT21 86 aa14.95□□□□□ -0.02
VIM-209ENST00000544301 OR10P1Q8NGE3 313 aa14.95□□□□□ -0.02
VIM-209ENST00000544301 FAM216AQ8WUB2 273 aa14.95□□□□□ -0.02
VIM-209ENST00000544301 MGAQ8IWI9 3026 aa14.95□□□□□ -0.02
VIM-209ENST00000544301 CEBPZOSA8MTT3 80 aa14.95□□□□□ -0.02
VIM-209ENST00000544301 ATXN7O15265 892 aaPredicted RBP14.95□□□□□ -0.02
VIM-209ENST00000544301 IGKV1D-33P01593 117 aa14.95□□□□□ -0.02
VIM-209ENST00000544301 IGKV1-33P01594 117 aa14.95□□□□□ -0.02
VIM-209ENST00000544301 EDDM3BP56851 147 aa14.95□□□□□ -0.02
VIM-209ENST00000544301 SLC35E3Q7Z769 313 aa14.95□□□□□ -0.02
VIM-209ENST00000544301 FAM57AQ8TBR7 257 aa14.95□□□□□ -0.02
VIM-209ENST00000544301 MALSU1Q96EH3 234 aa14.95□□□□□ -0.02
VIM-209ENST00000544301 QTRT1Q9BXR0 403 aaKnown RBP14.95□□□□□ -0.02
VIM-209ENST00000544301 A0A087WWC5 75 aa14.94□□□□□ -0.02
VIM-209ENST00000544301 MAP1LC3B2A6NCE7 125 aa14.94□□□□□ -0.02
VIM-209ENST00000544301 ZNF727A8MUV8 499 aa14.94□□□□□ -0.02
VIM-209ENST00000544301 FCGR3BO75015 233 aa14.94□□□□□ -0.02
VIM-209ENST00000544301 OR9G9P0C7N8 305 aa14.94□□□□□ -0.02
VIM-209ENST00000544301 ZNF134P52741 427 aa14.94□□□□□ -0.02
VIM-209ENST00000544301 RPS16P62249 146 aaKnown RBP14.94□□□□□ -0.02
VIM-209ENST00000544301 FAM27E3Q08E93 113 aa14.94□□□□□ -0.02
VIM-209ENST00000544301 HNF4GQ14541 408 aa14.94□□□□□ -0.02
VIM-209ENST00000544301 FAM201AQ5SY85 155 aa14.94□□□□□ -0.02
VIM-209ENST00000544301 FAM90A2PQ658T7 463 aa14.94□□□□□ -0.02
VIM-209ENST00000544301 ACSM6Q6P461 480 aa14.94□□□□□ -0.02
VIM-209ENST00000544301 FAM180AQ6UWF9 173 aa14.94□□□□□ -0.02
VIM-209ENST00000544301 C22orf34Q6ZV56 151 aa14.94□□□□□ -0.02
VIM-209ENST00000544301 RPP25LQ8N5L8 163 aaKnown RBP14.94□□□□□ -0.02
VIM-209ENST00000544301 MAP1LC3BQ9GZQ8 125 aa14.94□□□□□ -0.02
VIM-209ENST00000544301 CALYQ9NYX4 217 aa14.94□□□□□ -0.02
VIM-209ENST00000544301 M0R1X1 148 aa14.93□□□□□ -0.02
VIM-209ENST00000544301 IFNA4P05014 189 aa14.93□□□□□ -0.02
VIM-209ENST00000544301 GATA4P43694 442 aa14.93□□□□□ -0.02
VIM-209ENST00000544301 SNRPEP62304 92 aaKnown RBP14.93□□□□□ -0.02
VIM-209ENST00000544301 RAB11AP62491 216 aa14.93□□□□□ -0.02
VIM-209ENST00000544301 KRTCAP3Q53RY4 240 aa14.93□□□□□ -0.02
VIM-209ENST00000544301 RPL39P5Q59GN2 51 aa14.93□□□□□ -0.02
VIM-209ENST00000544301 CA5BP1Q8WTZ4 195 aa14.93□□□□□ -0.02
VIM-209ENST00000544301 SLC39A9Q9NUM3 307 aa14.93□□□□□ -0.02
VIM-209ENST00000544301 ZFHX2Q9C0A1 2572 aaPredicted RBP14.93□□□□□ -0.02
VIM-209ENST00000544301 A8MXE2 369 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms