RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 IGSF23A1L1A6 192 aa12.64□□□□□ -0.39
CHFR-223ENST00000544268 CD300LBA8K4G0 201 aa12.64□□□□□ -0.39
CHFR-223ENST00000544268 ADAM20O43506 726 aa12.64□□□□□ -0.39
CHFR-223ENST00000544268 SSSCA1O60232 199 aa12.64□□□□□ -0.39
CHFR-223ENST00000544268 TMEM50AO95807 157 aa12.64□□□□□ -0.39
CHFR-223ENST00000544268 NAPSAO96009 420 aa12.64□□□□□ -0.39
CHFR-223ENST00000544268 FGF12P61328 243 aa12.64□□□□□ -0.39
CHFR-223ENST00000544268 TLE4Q04727 773 aa12.64□□□□□ -0.39
CHFR-223ENST00000544268 GNMTQ14749 295 aa12.64□□□□□ -0.39
CHFR-223ENST00000544268 ZNF324BQ6AW86 544 aaPredicted RBP12.64□□□□□ -0.39
CHFR-223ENST00000544268 ZNF66Q6ZN08 573 aa12.64□□□□□ -0.39
CHFR-223ENST00000544268 CISD2Q8N5K1 135 aaKnown RBP12.64□□□□□ -0.39
CHFR-223ENST00000544268 LRTM2Q8N967 370 aa12.64□□□□□ -0.39
CHFR-223ENST00000544268 LPAR2Q9HBW0 351 aa12.64□□□□□ -0.39
CHFR-223ENST00000544268 FKBP11Q9NYL4 201 aa12.64□□□□□ -0.39
CHFR-223ENST00000544268 POLR3KQ9Y2Y1 108 aaPredicted RBP12.64□□□□□ -0.39
CHFR-223ENST00000544268 C1QTNF9BB2RNN3 333 aa12.64□□□□□ -0.39
CHFR-223ENST00000544268 TCF21O43680 179 aa12.64□□□□□ -0.39
CHFR-223ENST00000544268 PITX3O75364 302 aa12.64□□□□□ -0.39
CHFR-223ENST00000544268 C1QTNF9P0C862 333 aa12.64□□□□□ -0.39
CHFR-223ENST00000544268 RAB11AP62491 216 aa12.64□□□□□ -0.39
CHFR-223ENST00000544268 P2RY6Q15077 328 aa12.64□□□□□ -0.39
CHFR-223ENST00000544268 ZNF705AQ6ZN79 300 aaPredicted RBP12.64□□□□□ -0.39
CHFR-223ENST00000544268 TMEM171Q8WVE6 324 aa12.64□□□□□ -0.39
CHFR-223ENST00000544268 BCL2L2Q92843 193 aaPredicted RBP12.64□□□□□ -0.39
CHFR-223ENST00000544268 DIRC2Q96SL1 478 aa12.64□□□□□ -0.39
CHFR-223ENST00000544268 UBE2J1Q9Y385 318 aaPredicted RBP12.64□□□□□ -0.39
CHFR-223ENST00000544268 A0A0G2JRQ6 117 aa12.63□□□□□ -0.39
CHFR-223ENST00000544268 J3QW42 95 aa12.63□□□□□ -0.39
CHFR-223ENST00000544268 CST7O76096 145 aa12.63□□□□□ -0.39
CHFR-223ENST00000544268 SCGB1D1O95968 90 aa12.63□□□□□ -0.39
CHFR-223ENST00000544268 PFN1P07737 140 aaKnown RBP12.63□□□□□ -0.39
CHFR-223ENST00000544268 IGHV1-2P23083 117 aa12.63□□□□□ -0.39
CHFR-223ENST00000544268 ALKBH6Q3KRA9 238 aa12.63□□□□□ -0.39
CHFR-223ENST00000544268 KRTCAP3Q53RY4 240 aa12.63□□□□□ -0.39
CHFR-223ENST00000544268 DPPA3Q6W0C5 159 aa12.63□□□□□ -0.39
CHFR-223ENST00000544268 ODF3L1Q8IXM7 274 aa12.63□□□□□ -0.39
CHFR-223ENST00000544268 RPRMLQ8N4K4 120 aa12.63□□□□□ -0.39
CHFR-223ENST00000544268 TMEM217Q8N7C4 229 aa12.63□□□□□ -0.39
CHFR-223ENST00000544268 TMEM170AQ8WVE7 144 aa12.63□□□□□ -0.39
CHFR-223ENST00000544268 GNPNAT1Q96EK6 184 aaPredicted RBP12.63□□□□□ -0.39
CHFR-223ENST00000544268 TMEM222Q9H0R3 208 aa12.63□□□□□ -0.39
CHFR-223ENST00000544268 FAM215AQ9Y5M1 114 aa12.63□□□□□ -0.39
CHFR-223ENST00000544268 CACNA1AO00555 2505 aa12.63□□□□□ -0.39
CHFR-223ENST00000544268 TRAV24A0A0B4J272 114 aa12.63□□□□□ -0.39
CHFR-223ENST00000544268 OR10J1P30954 320 aa12.63□□□□□ -0.39
CHFR-223ENST00000544268 BRS3P32247 399 aa12.63□□□□□ -0.39
CHFR-223ENST00000544268 SELENOHQ8IZQ5 122 aaKnown RBP12.63□□□□□ -0.39
CHFR-223ENST00000544268 OR2C3Q8N628 320 aa12.63□□□□□ -0.39
CHFR-223ENST00000544268 IL1F10Q8WWZ1 152 aa12.63□□□□□ -0.39
CHFR-223ENST00000544268 TNFRSF14Q92956 283 aa12.63□□□□□ -0.39
CHFR-223ENST00000544268 APOBEC3DQ96AK3 386 aaPredicted RBP12.63□□□□□ -0.39
CHFR-223ENST00000544268 TRAV1-1A0A0B4J248 108 aa12.62□□□□□ -0.39
CHFR-223ENST00000544268 MBD3L4A6NDZ8 208 aaPredicted RBP12.62□□□□□ -0.39
CHFR-223ENST00000544268 MBD3L3A6NE82 208 aaPredicted RBP12.62□□□□□ -0.39
CHFR-223ENST00000544268 MBD3L5A6NJ08 208 aaPredicted RBP12.62□□□□□ -0.39
CHFR-223ENST00000544268 TRAPPC2LH3BP13 241 aa12.62□□□□□ -0.39
CHFR-223ENST00000544268 TNFSF13O75888 250 aa12.62□□□□□ -0.39
CHFR-223ENST00000544268 LYZL6O75951 148 aa12.62□□□□□ -0.39
CHFR-223ENST00000544268 IRF2P14316 349 aa12.62□□□□□ -0.39
CHFR-223ENST00000544268 ELLP55199 621 aaPredicted RBP12.62□□□□□ -0.39
CHFR-223ENST00000544268 FAM53AQ6NSI3 398 aaPredicted RBP12.62□□□□□ -0.39
CHFR-223ENST00000544268 SMIM15Q7Z3B0 74 aa12.62□□□□□ -0.39
CHFR-223ENST00000544268 MDP1Q86V88 176 aa12.62□□□□□ -0.39
CHFR-223ENST00000544268 MBD3L2Q8NHZ7 208 aaPredicted RBP12.62□□□□□ -0.39
CHFR-223ENST00000544268 OR1A1Q9P1Q5 309 aa12.62□□□□□ -0.39
CHFR-223ENST00000544268 ZGRF1Q86YA3 2104 aa12.62□□□□□ -0.39
CHFR-223ENST00000544268 H3BP45 60 aa12.62□□□□□ -0.39
CHFR-223ENST00000544268 TFF1P04155 84 aa12.62□□□□□ -0.39
CHFR-223ENST00000544268 ARR3P36575 388 aa12.62□□□□□ -0.39
CHFR-223ENST00000544268 UCP3P55916 312 aa12.62□□□□□ -0.39
CHFR-223ENST00000544268 PCSK4Q6UW60 755 aa12.62□□□□□ -0.39
CHFR-223ENST00000544268 Q6ZT83 130 aa12.62□□□□□ -0.39
CHFR-223ENST00000544268 ZNF695Q8IW36 515 aa12.62□□□□□ -0.39
CHFR-223ENST00000544268 OR51H1Q8NH63 302 aa12.62□□□□□ -0.39
CHFR-223ENST00000544268 MRPL30Q8TCC3 161 aaKnown RBP12.62□□□□□ -0.39
CHFR-223ENST00000544268 OR5P3Q8WZ94 311 aa12.62□□□□□ -0.39
CHFR-223ENST00000544268 CISD1Q9NZ45 108 aaKnown RBP12.62□□□□□ -0.39
CHFR-223ENST00000544268 NAGKQ9UJ70 344 aa12.62□□□□□ -0.39
CHFR-223ENST00000544268 SPTA1P02549 2419 aa12.61□□□□□ -0.39
CHFR-223ENST00000544268 HPRT1P00492 218 aa12.61□□□□□ -0.39
CHFR-223ENST00000544268 CEACAM8P31997 349 aaPredicted RBP12.61□□□□□ -0.39
CHFR-223ENST00000544268 VAMP2P63027 116 aa12.61□□□□□ -0.39
CHFR-223ENST00000544268 RUNX1Q01196 453 aa12.61□□□□□ -0.39
CHFR-223ENST00000544268 WDR86Q86TI4 376 aa12.61□□□□□ -0.39
CHFR-223ENST00000544268 CMTM1Q8IZ96 169 aa12.61□□□□□ -0.39
CHFR-223ENST00000544268 SIAH2O43255 324 aa12.61□□□□□ -0.39
CHFR-223ENST00000544268 WDR1O75083 606 aa12.61□□□□□ -0.39
CHFR-223ENST00000544268 PRR30Q53SZ7 412 aaPredicted RBP12.61□□□□□ -0.39
CHFR-223ENST00000544268 LHFPL4Q7Z7J7 247 aa12.61□□□□□ -0.39
CHFR-223ENST00000544268 GBGT1Q8N5D6 347 aa12.61□□□□□ -0.39
CHFR-223ENST00000544268 MRGPRDQ8TDS7 321 aa12.61□□□□□ -0.39
CHFR-223ENST00000544268 STARD4Q96DR4 205 aa12.61□□□□□ -0.39
CHFR-223ENST00000544268 C11orf1Q9H5F2 150 aa12.61□□□□□ -0.39
CHFR-223ENST00000544268 LAMP3Q9UQV4 416 aa12.61□□□□□ -0.39
CHFR-223ENST00000544268 IL6RP08887 468 aaPredicted RBP12.6□□□□□ -0.39
CHFR-223ENST00000544268 FAM3BP58499 235 aaPredicted RBP12.6□□□□□ -0.39
CHFR-223ENST00000544268 CACNA1DQ01668 2161 aa12.6□□□□□ -0.39
CHFR-223ENST00000544268 ACOT6Q3I5F7 207 aaPredicted RBP12.6□□□□□ -0.39
CHFR-223ENST00000544268 MKXQ8IYA7 352 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms