RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 TMEM235A6NFC5 223 aa18.21■□□□□ 0.51
CHFR-222ENST00000544093 RRASP10301 218 aa18.21■□□□□ 0.51
CHFR-222ENST00000544093 PPIFP30405 207 aaKnown RBP18.21■□□□□ 0.51
CHFR-222ENST00000544093 CRIP2P52943 208 aaPredicted RBP18.21■□□□□ 0.51
CHFR-222ENST00000544093 TMEM267Q0VDI3 215 aaPredicted RBP18.21■□□□□ 0.51
CHFR-222ENST00000544093 P2RX4Q99571 388 aa18.21■□□□□ 0.51
CHFR-222ENST00000544093 SLC35D1Q9NTN3 355 aa18.21■□□□□ 0.51
CHFR-222ENST00000544093 METTL1Q9UBP6 276 aaKnown RBP18.21■□□□□ 0.51
CHFR-222ENST00000544093 SPATA2Q9UM82 520 aa18.21■□□□□ 0.51
CHFR-222ENST00000544093 IGLV1-40P01703 118 aa18.2■□□□□ 0.5
CHFR-222ENST00000544093 IGKV1-16P04430 117 aa18.2■□□□□ 0.5
CHFR-222ENST00000544093 LGALS7P47929 136 aa18.2■□□□□ 0.5
CHFR-222ENST00000544093 RPS16P62249 146 aaKnown RBP18.2■□□□□ 0.5
CHFR-222ENST00000544093 PSG5Q15238 335 aa18.2■□□□□ 0.5
CHFR-222ENST00000544093 CNIH2Q6PI25 160 aa18.2■□□□□ 0.5
CHFR-222ENST00000544093 ZNF562Q6V9R5 426 aa18.2■□□□□ 0.5
CHFR-222ENST00000544093 NUDCD2Q8WVJ2 157 aa18.2■□□□□ 0.5
CHFR-222ENST00000544093 C4orf3Q8WVX3 66 aa18.2■□□□□ 0.5
CHFR-222ENST00000544093 DIABLOQ9NR28 239 aa18.2■□□□□ 0.5
CHFR-222ENST00000544093 ELF5Q9UKW6 265 aaPredicted RBP18.2■□□□□ 0.5
CHFR-222ENST00000544093 WSB1Q9Y6I7 421 aa18.2■□□□□ 0.5
CHFR-222ENST00000544093 IGKV1D-8A0A087WSZ0 117 aa18.19■□□□□ 0.5
CHFR-222ENST00000544093 CCL24O00175 119 aa18.19■□□□□ 0.5
CHFR-222ENST00000544093 SLC22A5O76082 557 aa18.19■□□□□ 0.5
CHFR-222ENST00000544093 CX3CL1P78423 397 aa18.19■□□□□ 0.5
CHFR-222ENST00000544093 RTL8BQ17RB0 113 aa18.19■□□□□ 0.5
CHFR-222ENST00000544093 C18orf65Q6ZTR6 163 aa18.19■□□□□ 0.5
CHFR-222ENST00000544093 MINDY2Q8NBR6 621 aa18.19■□□□□ 0.5
CHFR-222ENST00000544093 MYOZ3Q8TDC0 251 aa18.19■□□□□ 0.5
CHFR-222ENST00000544093 DPF1Q92782 380 aa18.19■□□□□ 0.5
CHFR-222ENST00000544093 SLC25A38Q96DW6 304 aa18.19■□□□□ 0.5
CHFR-222ENST00000544093 YIPF6Q96EC8 236 aa18.19■□□□□ 0.5
CHFR-222ENST00000544093 UBE2E2Q96LR5 201 aa18.19■□□□□ 0.5
CHFR-222ENST00000544093 G3V318 75 aa18.18■□□□□ 0.5
CHFR-222ENST00000544093 FOXB2Q5VYV0 432 aa18.18■□□□□ 0.5
CHFR-222ENST00000544093 PYHIN1Q6K0P9 492 aa18.18■□□□□ 0.5
CHFR-222ENST00000544093 OR5H6Q8NGV6 325 aa18.18■□□□□ 0.5
CHFR-222ENST00000544093 ANXA10Q9UJ72 324 aa18.18■□□□□ 0.5
CHFR-222ENST00000544093 OR2W1Q9Y3N9 320 aa18.18■□□□□ 0.5
CHFR-222ENST00000544093 ABHD5Q8WTS1 349 aa18.17■□□□□ 0.5
CHFR-222ENST00000544093 RAX2Q96IS3 184 aa18.17■□□□□ 0.5
CHFR-222ENST00000544093 FOXA2Q9Y261 457 aaPredicted RBP18.17■□□□□ 0.5
CHFR-222ENST00000544093 PRKDCP78527 4128 aaKnown RBP18.17■□□□□ 0.5
CHFR-222ENST00000544093 TRAV18A0A075B6X5 111 aa18.16■□□□□ 0.5
CHFR-222ENST00000544093 TRIM64CA6NLI5 447 aa18.16■□□□□ 0.5
CHFR-222ENST00000544093 SSX5O60225 188 aa18.16■□□□□ 0.5
CHFR-222ENST00000544093 LUMP51884 338 aaPredicted RBP18.16■□□□□ 0.5
CHFR-222ENST00000544093 NDPQ00604 133 aa18.16■□□□□ 0.5
CHFR-222ENST00000544093 ECSCRQ19T08 205 aa18.16■□□□□ 0.5
CHFR-222ENST00000544093 AKIRIN2Q53H80 203 aa18.16■□□□□ 0.5
CHFR-222ENST00000544093 LCNL1Q6ZST4 164 aa18.16■□□□□ 0.5
CHFR-222ENST00000544093 ZNF645Q8N7E2 425 aa18.16■□□□□ 0.5
CHFR-222ENST00000544093 ZMAT5Q9UDW3 170 aaKnown RBP18.16■□□□□ 0.5
CHFR-222ENST00000544093 VSIG4Q9Y279 399 aa18.16■□□□□ 0.5
CHFR-222ENST00000544093 FCN1O00602 326 aa18.15■□□□□ 0.5
CHFR-222ENST00000544093 CA2P00918 260 aa18.15■□□□□ 0.5
CHFR-222ENST00000544093 HLA-DQB1P01920 261 aa18.15■□□□□ 0.5
CHFR-222ENST00000544093 CD40LGP29965 261 aa18.15■□□□□ 0.5
CHFR-222ENST00000544093 RAB9AP51151 201 aa18.15■□□□□ 0.5
CHFR-222ENST00000544093 LINC00205P59089 165 aa18.15■□□□□ 0.5
CHFR-222ENST00000544093 TMEM177Q53S58 311 aa18.15■□□□□ 0.5
CHFR-222ENST00000544093 C19orf54Q5BKX5 351 aa18.15■□□□□ 0.5
CHFR-222ENST00000544093 PPP1R27Q86WC6 154 aa18.15■□□□□ 0.5
CHFR-222ENST00000544093 OR5M8Q8NGP6 311 aa18.15■□□□□ 0.5
CHFR-222ENST00000544093 S100A16Q96FQ6 103 aaKnown RBP18.15■□□□□ 0.5
CHFR-222ENST00000544093 HARBI1Q96MB7 349 aa18.15■□□□□ 0.5
CHFR-222ENST00000544093 NUBP2Q9Y5Y2 271 aa18.15■□□□□ 0.5
CHFR-222ENST00000544093 A0A1W2PN81 502 aa18.14■□□□□ 0.49
CHFR-222ENST00000544093 SHOXO15266 292 aa18.14■□□□□ 0.49
CHFR-222ENST00000544093 SLC25A17O43808 307 aa18.14■□□□□ 0.49
CHFR-222ENST00000544093 DUTP33316 252 aaKnown RBP18.14■□□□□ 0.49
CHFR-222ENST00000544093 CHRNA7P36544 502 aa18.14■□□□□ 0.49
CHFR-222ENST00000544093 CBX5P45973 191 aa18.14■□□□□ 0.49
CHFR-222ENST00000544093 ARPC4P59998 168 aa18.14■□□□□ 0.49
CHFR-222ENST00000544093 RUNX1Q01196 453 aa18.14■□□□□ 0.49
CHFR-222ENST00000544093 ZNF491Q8N8L2 437 aa18.14■□□□□ 0.49
CHFR-222ENST00000544093 BEST4Q8NFU0 473 aa18.14■□□□□ 0.49
CHFR-222ENST00000544093 ARPC1AQ92747 370 aa18.14■□□□□ 0.49
CHFR-222ENST00000544093 KCTD12Q96CX2 325 aaKnown RBP18.14■□□□□ 0.49
CHFR-222ENST00000544093 FBXO7Q9Y3I1 522 aa18.14■□□□□ 0.49
CHFR-222ENST00000544093 XRCC3O43542 346 aa18.13■□□□□ 0.49
CHFR-222ENST00000544093 NFYAP23511 347 aaPredicted RBP18.13■□□□□ 0.49
CHFR-222ENST00000544093 RPS19P39019 145 aaKnown RBP18.13■□□□□ 0.49
CHFR-222ENST00000544093 ACTBL2Q562R1 376 aa18.13■□□□□ 0.49
CHFR-222ENST00000544093 UBE2NLQ5JXB2 153 aa18.13■□□□□ 0.49
CHFR-222ENST00000544093 HOGA1Q86XE5 327 aa18.13■□□□□ 0.49
CHFR-222ENST00000544093 BVESQ8NE79 360 aa18.13■□□□□ 0.49
CHFR-222ENST00000544093 OSR1Q8TAX0 266 aaPredicted RBP18.13■□□□□ 0.49
CHFR-222ENST00000544093 DDB2Q92466 427 aa18.13■□□□□ 0.49
CHFR-222ENST00000544093 C5orf30Q96GV9 206 aa18.13■□□□□ 0.49
CHFR-222ENST00000544093 CLCC1Q96S66 551 aa18.13■□□□□ 0.49
CHFR-222ENST00000544093 KLK15Q9H2R5 256 aa18.13■□□□□ 0.49
CHFR-222ENST00000544093 AUNIPQ9H7T9 357 aa18.13■□□□□ 0.49
CHFR-222ENST00000544093 AURKAIP1Q9NWT8 199 aaPredicted RBP18.13■□□□□ 0.49
CHFR-222ENST00000544093 IGLV2-23P01705 113 aa18.12■□□□□ 0.49
CHFR-222ENST00000544093 RAB25P57735 213 aa18.12■□□□□ 0.49
CHFR-222ENST00000544093 LSM3P62310 102 aaKnown RBP18.12■□□□□ 0.49
CHFR-222ENST00000544093 EGFEM1PQ0D2K5 195 aa18.12■□□□□ 0.49
CHFR-222ENST00000544093 FHL3Q13643 280 aa18.12■□□□□ 0.49
CHFR-222ENST00000544093 FXYD3Q14802 87 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms