RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 ZBTB34Q8NCN2 500 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 OR51S1Q8NGJ8 323 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 TERB2Q8NHR7 220 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 RBMXL1Q96E39 390 aaKnown RBP11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 ADTRPQ96IZ2 230 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 AKR1E2Q96JD6 320 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 SLC25A33Q9BSK2 321 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 CCDC32Q9BV29 185 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 HRASLSQ9HDD0 168 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 RAB18Q9NP72 206 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 WASHC3Q9Y3C0 194 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 LINC00854A0A1B0GVQ3 168 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 FAM181BA6NEQ2 426 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 H0YJW9 148 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 MOSP00540 346 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 CD40LGP29965 261 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 GNRHRP30968 328 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 DUTP33316 252 aaKnown RBP11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 MSMO1Q15800 293 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 FBLN7Q53RD9 439 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 DHRS7BQ6IAN0 325 aaPredicted RBP11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 KCTD9Q7L273 389 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 LHFPL1Q86WI0 220 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 CMTM1Q8IZ96 169 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 OR5AN1Q8NGI8 311 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 EAF1Q96JC9 268 aaPredicted RBP11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 HSD17B10Q99714 261 aaKnown RBP11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 SLC35D1Q9NTN3 355 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 SCP2D1Q9UJQ7 156 aa11.6□□□□□ -0.55
TNFRSF1A-216ENST00000543995 GPR31O00270 319 aa11.59□□□□□ -0.55
TNFRSF1A-216ENST00000543995 CHST1O43916 411 aa11.59□□□□□ -0.55
TNFRSF1A-216ENST00000543995 OR2F2O95006 317 aa11.59□□□□□ -0.55
TNFRSF1A-216ENST00000543995 S100GP29377 79 aa11.59□□□□□ -0.55
TNFRSF1A-216ENST00000543995 UCP3P55916 312 aa11.59□□□□□ -0.55
TNFRSF1A-216ENST00000543995 CBX3Q13185 183 aa11.59□□□□□ -0.55
TNFRSF1A-216ENST00000543995 EBI3Q14213 229 aa11.59□□□□□ -0.55
TNFRSF1A-216ENST00000543995 RTL8BQ17RB0 113 aa11.59□□□□□ -0.55
TNFRSF1A-216ENST00000543995 ZNF66Q6ZN08 573 aa11.59□□□□□ -0.55
TNFRSF1A-216ENST00000543995 PDPNQ86YL7 162 aa11.59□□□□□ -0.55
TNFRSF1A-216ENST00000543995 SLC38A6Q8IZM9 456 aa11.59□□□□□ -0.55
TNFRSF1A-216ENST00000543995 TCTEX1D2Q8WW35 142 aa11.59□□□□□ -0.55
TNFRSF1A-216ENST00000543995 DEDD2Q8WXF8 326 aa11.59□□□□□ -0.55
TNFRSF1A-216ENST00000543995 RBM14Q96PK6 669 aaKnown RBP11.59□□□□□ -0.55
TNFRSF1A-216ENST00000543995 GPHA2Q96T91 129 aa11.59□□□□□ -0.55
TNFRSF1A-216ENST00000543995 PRELID3BQ9Y3B1 194 aa11.59□□□□□ -0.55
TNFRSF1A-216ENST00000543995 NIPBLQ6KC79 2804 aaeCLIP11.58□□□□□ -0.55
TNFRSF1A-216ENST00000543995 NCBP2LA6PVI3 153 aaKnown RBP11.58□□□□□ -0.56
TNFRSF1A-216ENST00000543995 LINC00473A8K010 186 aa11.58□□□□□ -0.56
TNFRSF1A-216ENST00000543995 TAGLNQ01995 201 aaKnown RBP11.58□□□□□ -0.56
TNFRSF1A-216ENST00000543995 CATR1Q13166 79 aa11.58□□□□□ -0.56
TNFRSF1A-216ENST00000543995 ABCA11PQ4W5N1 156 aa11.58□□□□□ -0.56
TNFRSF1A-216ENST00000543995 PHLDA2Q53GA4 152 aa11.58□□□□□ -0.56
TNFRSF1A-216ENST00000543995 IDO2Q6ZQW0 420 aa11.58□□□□□ -0.56
TNFRSF1A-216ENST00000543995 C16orf82Q7Z2V1 217 aa11.58□□□□□ -0.56
TNFRSF1A-216ENST00000543995 BVESQ8NE79 360 aa11.58□□□□□ -0.56
TNFRSF1A-216ENST00000543995 ZFAND2BQ8WV99 257 aa11.58□□□□□ -0.56
TNFRSF1A-216ENST00000543995 RSRP1Q9BUV0 290 aa11.58□□□□□ -0.56
TNFRSF1A-216ENST00000543995 SLC2A8Q9NY64 477 aa11.58□□□□□ -0.56
TNFRSF1A-216ENST00000543995 CENPXA8MT69 81 aa11.57□□□□□ -0.56
TNFRSF1A-216ENST00000543995 PEX14O75381 377 aa11.57□□□□□ -0.56
TNFRSF1A-216ENST00000543995 RRASP10301 218 aa11.57□□□□□ -0.56
TNFRSF1A-216ENST00000543995 ECI1P42126 302 aa11.57□□□□□ -0.56
TNFRSF1A-216ENST00000543995 RPL30P62888 115 aaKnown RBP11.57□□□□□ -0.56
TNFRSF1A-216ENST00000543995 MMDQ15546 238 aa11.57□□□□□ -0.56
TNFRSF1A-216ENST00000543995 OR2B11Q5JQS5 317 aa11.57□□□□□ -0.56
TNFRSF1A-216ENST00000543995 OR51H1Q8NH63 302 aa11.57□□□□□ -0.56
TNFRSF1A-216ENST00000543995 ZFAND1Q8TCF1 268 aa11.57□□□□□ -0.56
TNFRSF1A-216ENST00000543995 MARCH1Q8TCQ1 289 aa11.57□□□□□ -0.56
TNFRSF1A-216ENST00000543995 FLYWCH2Q96CP2 140 aaKnown RBP11.57□□□□□ -0.56
TNFRSF1A-216ENST00000543995 TSC22D3Q99576 134 aa11.57□□□□□ -0.56
TNFRSF1A-216ENST00000543995 MOB4Q9Y3A3 225 aa11.57□□□□□ -0.56
TNFRSF1A-216ENST00000543995 RNF212BA8MTL3 300 aa11.56□□□□□ -0.56
TNFRSF1A-216ENST00000543995 FCGR3BO75015 233 aa11.56□□□□□ -0.56
TNFRSF1A-216ENST00000543995 IGKV1-16P04430 117 aa11.56□□□□□ -0.56
TNFRSF1A-216ENST00000543995 RLN1P04808 185 aa11.56□□□□□ -0.56
TNFRSF1A-216ENST00000543995 PI3P19957 117 aa11.56□□□□□ -0.56
TNFRSF1A-216ENST00000543995 RPL15P61313 204 aaKnown RBP11.56□□□□□ -0.56
TNFRSF1A-216ENST00000543995 RPS16P62249 146 aaKnown RBP11.56□□□□□ -0.56
TNFRSF1A-216ENST00000543995 EIF4EBP1Q13541 118 aaPredicted RBP11.56□□□□□ -0.56
TNFRSF1A-216ENST00000543995 OR4C13Q8NGP0 309 aa11.56□□□□□ -0.56
TNFRSF1A-216ENST00000543995 OR13C8Q8NGS7 320 aa11.56□□□□□ -0.56
TNFRSF1A-216ENST00000543995 DDB2Q92466 427 aa11.56□□□□□ -0.56
TNFRSF1A-216ENST00000543995 ZNF486Q96H40 463 aaPredicted RBP11.56□□□□□ -0.56
TNFRSF1A-216ENST00000543995 RITA1Q96K30 269 aa11.56□□□□□ -0.56
TNFRSF1A-216ENST00000543995 NPFFR1Q9GZQ6 430 aa11.56□□□□□ -0.56
TNFRSF1A-216ENST00000543995 C1RLQ9NZP8 487 aa11.56□□□□□ -0.56
TNFRSF1A-216ENST00000543995 C14orf166Q9Y224 244 aaKnown RBP11.56□□□□□ -0.56
TNFRSF1A-216ENST00000543995 NAP1L6A6NFF2 107 aa11.55□□□□□ -0.56
TNFRSF1A-216ENST00000543995 M0QZK8 103 aa11.55□□□□□ -0.56
TNFRSF1A-216ENST00000543995 PGLYRP1O75594 196 aaPredicted RBP11.55□□□□□ -0.56
TNFRSF1A-216ENST00000543995 CRYZL1O95825 349 aa11.55□□□□□ -0.56
TNFRSF1A-216ENST00000543995 KIR2DS2P43631 304 aa11.55□□□□□ -0.56
TNFRSF1A-216ENST00000543995 PIGPP57054 158 aa11.55□□□□□ -0.56
TNFRSF1A-216ENST00000543995 Q8N6K4 173 aa11.55□□□□□ -0.56
TNFRSF1A-216ENST00000543995 POC5Q8NA72 575 aa11.55□□□□□ -0.56
TNFRSF1A-216ENST00000543995 OR8H1Q8NGG4 311 aa11.55□□□□□ -0.56
TNFRSF1A-216ENST00000543995 TAF15Q92804 592 aaKnown RBP eCLIP11.55□□□□□ -0.56
TNFRSF1A-216ENST00000543995 MRGPRFQ96AM1 343 aa11.55□□□□□ -0.56
TNFRSF1A-216ENST00000543995 SCGB3A2Q96PL1 93 aa11.55□□□□□ -0.56
TNFRSF1A-216ENST00000543995 SLC2A9Q9NRM0 540 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms