RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 VAMP1P23763 118 aa9.61□□□□□ -0.87
DDB1-223ENST00000543658 MC5RP33032 325 aa9.61□□□□□ -0.87
DDB1-223ENST00000543658 UBE2MP61081 183 aaKnown RBP9.61□□□□□ -0.87
DDB1-223ENST00000543658 DIAPH2-AS1Q14236 149 aa9.61□□□□□ -0.87
DDB1-223ENST00000543658 HES1Q14469 280 aa9.61□□□□□ -0.87
DDB1-223ENST00000543658 C4orf46Q504U0 113 aa9.61□□□□□ -0.87
DDB1-223ENST00000543658 TMEM128Q5BJH2 165 aa9.61□□□□□ -0.87
DDB1-223ENST00000543658 OR2B11Q5JQS5 317 aa9.61□□□□□ -0.87
DDB1-223ENST00000543658 RBMS3Q6XE24 437 aaKnown RBP9.61□□□□□ -0.87
DDB1-223ENST00000543658 GLDNQ6ZMI3 551 aaPredicted RBP9.61□□□□□ -0.87
DDB1-223ENST00000543658 C9orf139Q6ZV77 190 aa9.61□□□□□ -0.87
DDB1-223ENST00000543658 PDPNQ86YL7 162 aa9.61□□□□□ -0.87
DDB1-223ENST00000543658 TCTEX1D1Q8N7M0 179 aa9.61□□□□□ -0.87
DDB1-223ENST00000543658 DUSP18Q8NEJ0 188 aa9.61□□□□□ -0.87
DDB1-223ENST00000543658 OR4S2Q8NH73 311 aa9.61□□□□□ -0.87
DDB1-223ENST00000543658 CAPSLQ8WWF8 208 aa9.61□□□□□ -0.87
DDB1-223ENST00000543658 NABP2Q9BQ15 211 aa9.61□□□□□ -0.87
DDB1-223ENST00000543658 ZNF251Q9BRH9 671 aa9.61□□□□□ -0.87
DDB1-223ENST00000543658 RTBDNQ9BSG5 229 aaPredicted RBP9.61□□□□□ -0.87
DDB1-223ENST00000543658 NAA60Q9H7X0 242 aa9.61□□□□□ -0.87
DDB1-223ENST00000543658 FLVCR2Q9UPI3 526 aa9.61□□□□□ -0.87
DDB1-223ENST00000543658 WASHC3Q9Y3C0 194 aa9.61□□□□□ -0.87
DDB1-223ENST00000543658 TEX15Q9BXT5 2789 aa9.61□□□□□ -0.87
DDB1-223ENST00000543658 IGHV3-72A0A0B4J1Y9 119 aa9.6□□□□□ -0.87
DDB1-223ENST00000543658 C3orf85A0A1B0GTC6 90 aa9.6□□□□□ -0.87
DDB1-223ENST00000543658 A0A1W2PPI3 338 aa9.6□□□□□ -0.87
DDB1-223ENST00000543658 CRYM-AS1A6NIL9 109 aa9.6□□□□□ -0.87
DDB1-223ENST00000543658 INAFM1C9JVW0 142 aa9.6□□□□□ -0.87
DDB1-223ENST00000543658 INMT-MINDY4F8WBC2 141 aa9.6□□□□□ -0.87
DDB1-223ENST00000543658 TIMM23O14925 209 aa9.6□□□□□ -0.87
DDB1-223ENST00000543658 MPPED1O15442 326 aa9.6□□□□□ -0.87
DDB1-223ENST00000543658 FCGR3BO75015 233 aa9.6□□□□□ -0.87
DDB1-223ENST00000543658 PEX14O75381 377 aa9.6□□□□□ -0.87
DDB1-223ENST00000543658 IGLV2-14P01704 120 aa9.6□□□□□ -0.87
DDB1-223ENST00000543658 HLA-AP01891 365 aaKnown RBP9.6□□□□□ -0.87
DDB1-223ENST00000543658 SERPINE2P07093 398 aa9.6□□□□□ -0.87
DDB1-223ENST00000543658 CT45A6P0DMU7 189 aa9.6□□□□□ -0.87
DDB1-223ENST00000543658 CT45A5P0DMU8 189 aa9.6□□□□□ -0.87
DDB1-223ENST00000543658 CT45A7P0DMV0 189 aa9.6□□□□□ -0.87
DDB1-223ENST00000543658 F2RP25116 425 aa9.6□□□□□ -0.87
DDB1-223ENST00000543658 CD1BP29016 333 aa9.6□□□□□ -0.87
DDB1-223ENST00000543658 RAB25P57735 213 aa9.6□□□□□ -0.87
DDB1-223ENST00000543658 LRRC75BQ2VPJ9 315 aa9.6□□□□□ -0.87
DDB1-223ENST00000543658 DEFB112Q30KQ8 113 aa9.6□□□□□ -0.87
DDB1-223ENST00000543658 DHRS7BQ6IAN0 325 aaPredicted RBP9.6□□□□□ -0.87
DDB1-223ENST00000543658 CCBE1Q6UXH8 406 aaPredicted RBP9.6□□□□□ -0.87
DDB1-223ENST00000543658 SLC25A42Q86VD7 318 aa9.6□□□□□ -0.87
DDB1-223ENST00000543658 ADAD2Q8NCV1 583 aaKnown RBP9.6□□□□□ -0.87
DDB1-223ENST00000543658 CD300LFQ8TDQ1 290 aa9.6□□□□□ -0.87
DDB1-223ENST00000543658 C17orf50Q8WW18 174 aa9.6□□□□□ -0.87
DDB1-223ENST00000543658 C5orf30Q96GV9 206 aa9.6□□□□□ -0.87
DDB1-223ENST00000543658 GPHA2Q96T91 129 aa9.6□□□□□ -0.87
DDB1-223ENST00000543658 MEGF9Q9H1U4 602 aa9.6□□□□□ -0.87
DDB1-223ENST00000543658 GPN1Q9HCN4 374 aaPredicted RBP9.6□□□□□ -0.87
DDB1-223ENST00000543658 HIVEP2P31629 2446 aa9.59□□□□□ -0.87
DDB1-223ENST00000543658 PIGBOS1A0A0B4J2F0 54 aa9.59□□□□□ -0.87
DDB1-223ENST00000543658 LINC00473A8K010 186 aa9.59□□□□□ -0.87
DDB1-223ENST00000543658 H0Y980 276 aa9.59□□□□□ -0.87
DDB1-223ENST00000543658 H0YJW9 148 aa9.59□□□□□ -0.87
DDB1-223ENST00000543658 PRAF2O60831 178 aa9.59□□□□□ -0.87
DDB1-223ENST00000543658 ATG12O94817 140 aa9.59□□□□□ -0.87
DDB1-223ENST00000543658 IFNA2P01563 188 aa9.59□□□□□ -0.87
DDB1-223ENST00000543658 IGKV1D-33P01593 117 aa9.59□□□□□ -0.87
DDB1-223ENST00000543658 IGKV1-33P01594 117 aa9.59□□□□□ -0.87
DDB1-223ENST00000543658 OR4E1P0C645 316 aa9.59□□□□□ -0.87
DDB1-223ENST00000543658 FAM106CPP0CH98 169 aa9.59□□□□□ -0.87
DDB1-223ENST00000543658 ANXA7P20073 488 aaKnown RBP9.59□□□□□ -0.87
DDB1-223ENST00000543658 ERVK-16P61578 105 aa9.59□□□□□ -0.87
DDB1-223ENST00000543658 SRPXP78539 464 aa9.59□□□□□ -0.87
DDB1-223ENST00000543658 DHODHQ02127 395 aa9.59□□□□□ -0.87
DDB1-223ENST00000543658 LDLRAD2Q5SZI1 272 aa9.59□□□□□ -0.87
DDB1-223ENST00000543658 SPAG16Q8N0X2 631 aa9.59□□□□□ -0.87
DDB1-223ENST00000543658 BCL6BQ8N143 479 aaPredicted RBP9.59□□□□□ -0.87
DDB1-223ENST00000543658 DYNAPQ8N1N2 210 aa9.59□□□□□ -0.87
DDB1-223ENST00000543658 ZNF383Q8NA42 475 aa9.59□□□□□ -0.87
DDB1-223ENST00000543658 OR2T10Q8NGZ9 312 aa9.59□□□□□ -0.87
DDB1-223ENST00000543658 RNASE11Q8TAA1 199 aaKnown RBP9.59□□□□□ -0.87
DDB1-223ENST00000543658 SSX3Q99909 188 aa9.59□□□□□ -0.87
DDB1-223ENST00000543658 BEX1Q9HBH7 125 aa9.59□□□□□ -0.87
DDB1-223ENST00000543658 PITPNC1Q9UKF7 332 aa9.59□□□□□ -0.87
DDB1-223ENST00000543658 ZANQ9Y493 2812 aa9.59□□□□□ -0.87
DDB1-223ENST00000543658 MDFIC2A0A1B0GVS7 189 aa9.58□□□□□ -0.88
DDB1-223ENST00000543658 H3BUX3 64 aa9.58□□□□□ -0.88
DDB1-223ENST00000543658 SHOXO15266 292 aa9.58□□□□□ -0.88
DDB1-223ENST00000543658 PROP1O75360 226 aa9.58□□□□□ -0.88
DDB1-223ENST00000543658 VENTXO95231 258 aa9.58□□□□□ -0.88
DDB1-223ENST00000543658 CRYZL1O95825 349 aa9.58□□□□□ -0.88
DDB1-223ENST00000543658 MOSP00540 346 aa9.58□□□□□ -0.88
DDB1-223ENST00000543658 SNRNP70P08621 437 aaKnown RBP9.58□□□□□ -0.88
DDB1-223ENST00000543658 OR5AC1P0C628 307 aa9.58□□□□□ -0.88
DDB1-223ENST00000543658 TMEM11P17152 192 aa9.58□□□□□ -0.88
DDB1-223ENST00000543658 PAX6P26367 422 aa9.58□□□□□ -0.88
DDB1-223ENST00000543658 RAG2P55895 527 aa9.58□□□□□ -0.88
DDB1-223ENST00000543658 RPS16P62249 146 aaKnown RBP9.58□□□□□ -0.88
DDB1-223ENST00000543658 RPL30P62888 115 aaKnown RBP9.58□□□□□ -0.88
DDB1-223ENST00000543658 PPP1R1AQ13522 171 aa9.58□□□□□ -0.88
DDB1-223ENST00000543658 EIF4EBP1Q13541 118 aaPredicted RBP9.58□□□□□ -0.88
DDB1-223ENST00000543658 SLC9A3R2Q15599 337 aa9.58□□□□□ -0.88
DDB1-223ENST00000543658 AANATQ16613 207 aa9.58□□□□□ -0.88
DDB1-223ENST00000543658 LYG2Q86SG7 212 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms