RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 MYL9P24844 172 aa10.15□□□□□ -0.78
RTN3-213ENST00000543552 LGALS7P47929 136 aa10.15□□□□□ -0.78
RTN3-213ENST00000543552 CLDN12P56749 244 aa10.15□□□□□ -0.78
RTN3-213ENST00000543552 TBCEQ15813 527 aaPredicted RBP10.15□□□□□ -0.78
RTN3-213ENST00000543552 RTL8BQ17RB0 113 aa10.15□□□□□ -0.78
RTN3-213ENST00000543552 ZNF367Q7RTV3 350 aa10.15□□□□□ -0.78
RTN3-213ENST00000543552 ZNF383Q8NA42 475 aa10.15□□□□□ -0.78
RTN3-213ENST00000543552 DRAXINQ8NBI3 349 aaPredicted RBP10.15□□□□□ -0.78
RTN3-213ENST00000543552 LFNGQ8NES3 379 aa10.15□□□□□ -0.78
RTN3-213ENST00000543552 GRPEL2Q8TAA5 225 aa10.15□□□□□ -0.78
RTN3-213ENST00000543552 DLX4Q92988 240 aaPredicted RBP10.15□□□□□ -0.78
RTN3-213ENST00000543552 OR4C12Q96R67 309 aa10.15□□□□□ -0.78
RTN3-213ENST00000543552 CLCC1Q96S66 551 aa10.15□□□□□ -0.78
RTN3-213ENST00000543552 ELOVL1Q9BW60 279 aa10.15□□□□□ -0.78
RTN3-213ENST00000543552 SLC35D1Q9NTN3 355 aa10.15□□□□□ -0.78
RTN3-213ENST00000543552 TRAV1-2A0A0B4J238 106 aa10.14□□□□□ -0.79
RTN3-213ENST00000543552 A0A0G2JLM5 398 aa10.14□□□□□ -0.79
RTN3-213ENST00000543552 TMEM272A0A1B0GTI8 110 aa10.14□□□□□ -0.79
RTN3-213ENST00000543552 C13orf42A0A1B0GVH6 325 aa10.14□□□□□ -0.79
RTN3-213ENST00000543552 METTL21EPA6NDL7 271 aa10.14□□□□□ -0.79
RTN3-213ENST00000543552 BET1O15155 118 aa10.14□□□□□ -0.79
RTN3-213ENST00000543552 LDLRAD4O15165 306 aa10.14□□□□□ -0.79
RTN3-213ENST00000543552 SLC25A17O43808 307 aa10.14□□□□□ -0.79
RTN3-213ENST00000543552 TRGV3P03979 118 aa10.14□□□□□ -0.79
RTN3-213ENST00000543552 FCGR3AP08637 254 aa10.14□□□□□ -0.79
RTN3-213ENST00000543552 EGR2P11161 476 aaPredicted RBP10.14□□□□□ -0.79
RTN3-213ENST00000543552 TALDO1P37837 337 aa10.14□□□□□ -0.79
RTN3-213ENST00000543552 SLURP1P55000 103 aa10.14□□□□□ -0.79
RTN3-213ENST00000543552 FXYD3Q14802 87 aa10.14□□□□□ -0.79
RTN3-213ENST00000543552 ARL6IP1Q15041 203 aa10.14□□□□□ -0.79
RTN3-213ENST00000543552 MOGAT2Q3SYC2 334 aa10.14□□□□□ -0.79
RTN3-213ENST00000543552 PLAC9Q5JTB6 97 aa10.14□□□□□ -0.79
RTN3-213ENST00000543552 HES5Q5TA89 166 aa10.14□□□□□ -0.79
RTN3-213ENST00000543552 ACSM6Q6P461 480 aa10.14□□□□□ -0.79
RTN3-213ENST00000543552 POC5Q8NA72 575 aa10.14□□□□□ -0.79
RTN3-213ENST00000543552 CASTOR1Q8WTX7 329 aa10.14□□□□□ -0.79
RTN3-213ENST00000543552 NRG4Q8WWG1 115 aa10.14□□□□□ -0.79
RTN3-213ENST00000543552 TMEM68Q96MH6 324 aa10.14□□□□□ -0.79
RTN3-213ENST00000543552 FAM103A1Q9BTL3 118 aaKnown RBP10.14□□□□□ -0.79
RTN3-213ENST00000543552 CABLES2Q9BTV7 478 aa10.14□□□□□ -0.79
RTN3-213ENST00000543552 ALX4Q9H161 411 aaPredicted RBP10.14□□□□□ -0.79
RTN3-213ENST00000543552 OR2D2Q9H210 308 aa10.14□□□□□ -0.79
RTN3-213ENST00000543552 ZNF355PQ9NSJ1 428 aa10.14□□□□□ -0.79
RTN3-213ENST00000543552 GAB2Q9UQC2 676 aa10.14□□□□□ -0.79
RTN3-213ENST00000543552 SORL1Q92673 2214 aa10.14□□□□□ -0.79
RTN3-213ENST00000543552 IGHV4OR15-8A0A075B7B6 117 aa10.13□□□□□ -0.79
RTN3-213ENST00000543552 A0A087WW49 117 aa10.13□□□□□ -0.79
RTN3-213ENST00000543552 IGKV1-6A0A0C4DH72 117 aa10.13□□□□□ -0.79
RTN3-213ENST00000543552 IGHV3-11P01762 117 aa10.13□□□□□ -0.79
RTN3-213ENST00000543552 RRASP10301 218 aa10.13□□□□□ -0.79
RTN3-213ENST00000543552 RAB6AP20340 208 aa10.13□□□□□ -0.79
RTN3-213ENST00000543552 ZP3P21754 424 aa10.13□□□□□ -0.79
RTN3-213ENST00000543552 MAP2K4P45985 399 aa10.13□□□□□ -0.79
RTN3-213ENST00000543552 OR10R2Q8NGX6 335 aa10.13□□□□□ -0.79
RTN3-213ENST00000543552 ADTRPQ96IZ2 230 aa10.13□□□□□ -0.79
RTN3-213ENST00000543552 HARBI1Q96MB7 349 aa10.13□□□□□ -0.79
RTN3-213ENST00000543552 MS4A10Q96PG2 267 aa10.13□□□□□ -0.79
RTN3-213ENST00000543552 GINS4Q9BRT9 223 aa10.13□□□□□ -0.79
RTN3-213ENST00000543552 RANGRFQ9HD47 186 aaPredicted RBP10.13□□□□□ -0.79
RTN3-213ENST00000543552 NDUFB11Q9NX14 153 aa10.13□□□□□ -0.79
RTN3-213ENST00000543552 RBM7Q9Y580 266 aaKnown RBP10.13□□□□□ -0.79
RTN3-213ENST00000543552 TRBV6-7A0A0A0MS04 114 aa10.12□□□□□ -0.79
RTN3-213ENST00000543552 IFITM5A6NNB3 132 aa10.12□□□□□ -0.79
RTN3-213ENST00000543552 PROP1O75360 226 aa10.12□□□□□ -0.79
RTN3-213ENST00000543552 GP9P14770 177 aa10.12□□□□□ -0.79
RTN3-213ENST00000543552 HIST1H1DP16402 221 aaKnown RBP10.12□□□□□ -0.79
RTN3-213ENST00000543552 GALP22466 123 aa10.12□□□□□ -0.79
RTN3-213ENST00000543552 AADACP22760 399 aa10.12□□□□□ -0.79
RTN3-213ENST00000543552 IZUMO2Q6UXV1 221 aa10.12□□□□□ -0.79
RTN3-213ENST00000543552 RHOVQ96L33 236 aa10.12□□□□□ -0.79
RTN3-213ENST00000543552 ASCL2Q99929 193 aa10.12□□□□□ -0.79
RTN3-213ENST00000543552 TPSG1Q9NRR2 321 aa10.12□□□□□ -0.79
RTN3-213ENST00000543552 STUB1Q9UNE7 303 aa10.12□□□□□ -0.79
RTN3-213ENST00000543552 A0A075B6Q4 140 aa10.11□□□□□ -0.79
RTN3-213ENST00000543552 C3orf84H3BNL1 204 aa10.11□□□□□ -0.79
RTN3-213ENST00000543552 MFNGO00587 321 aa10.11□□□□□ -0.79
RTN3-213ENST00000543552 SHOXO15266 292 aa10.11□□□□□ -0.79
RTN3-213ENST00000543552 CREBL2O60519 120 aaPredicted RBP10.11□□□□□ -0.79
RTN3-213ENST00000543552 SPNP16150 400 aa10.11□□□□□ -0.79
RTN3-213ENST00000543552 GNB3P16520 340 aa10.11□□□□□ -0.79
RTN3-213ENST00000543552 RAB3BP20337 219 aa10.11□□□□□ -0.79
RTN3-213ENST00000543552 ARFRP1Q13795 201 aa10.11□□□□□ -0.79
RTN3-213ENST00000543552 SRSF7Q16629 238 aaKnown RBP eCLIP10.11□□□□□ -0.79
RTN3-213ENST00000543552 IGSF11Q5DX21 431 aa10.11□□□□□ -0.79
RTN3-213ENST00000543552 ANKRD13BQ86YJ7 626 aa10.11□□□□□ -0.79
RTN3-213ENST00000543552 CNBD2Q96M20 576 aa10.11□□□□□ -0.79
RTN3-213ENST00000543552 SDHAF2Q9NX18 166 aa10.11□□□□□ -0.79
RTN3-213ENST00000543552 TRDV1A0A1B0GX56 115 aa10.1□□□□□ -0.79
RTN3-213ENST00000543552 MRPS14O60783 128 aaKnown RBP10.1□□□□□ -0.79
RTN3-213ENST00000543552 SCGNO76038 276 aa10.1□□□□□ -0.79
RTN3-213ENST00000543552 BRI3O95415 125 aa10.1□□□□□ -0.79
RTN3-213ENST00000543552 GSTT2P0CG29 244 aa10.1□□□□□ -0.79
RTN3-213ENST00000543552 GSTT2BP0CG30 244 aa10.1□□□□□ -0.79
RTN3-213ENST00000543552 OR10A3P58181 314 aa10.1□□□□□ -0.79
RTN3-213ENST00000543552 SSX1Q16384 188 aa10.1□□□□□ -0.79
RTN3-213ENST00000543552 VMA21Q3ZAQ7 101 aa10.1□□□□□ -0.79
RTN3-213ENST00000543552 TMEM177Q53S58 311 aa10.1□□□□□ -0.79
RTN3-213ENST00000543552 Q6ZS49 121 aa10.1□□□□□ -0.79
RTN3-213ENST00000543552 PHB2Q99623 299 aa10.1□□□□□ -0.79
RTN3-213ENST00000543552 RSRP1Q9BUV0 290 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms