RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	DEFA1	P59665	94 aa		8.17	□□□□□ -1.1
CPSF7-221	ENST00000543545	DEFA3	P59666	94 aa		8.17	□□□□□ -1.1
CPSF7-221	ENST00000543545	CATR1	Q13166	79 aa		8.17	□□□□□ -1.1
CPSF7-221	ENST00000543545	MSMO1	Q15800	293 aa		8.17	□□□□□ -1.1
CPSF7-221	ENST00000543545	RTL8B	Q17RB0	113 aa		8.17	□□□□□ -1.1
CPSF7-221	ENST00000543545	OR2B11	Q5JQS5	317 aa		8.17	□□□□□ -1.1
CPSF7-221	ENST00000543545	KCTD9	Q7L273	389 aa		8.17	□□□□□ -1.1
CPSF7-221	ENST00000543545	LHFPL1	Q86WI0	220 aa		8.17	□□□□□ -1.1
CPSF7-221	ENST00000543545	ZNF383	Q8NA42	475 aa		8.17	□□□□□ -1.1
CPSF7-221	ENST00000543545	POC5	Q8NA72	575 aa		8.17	□□□□□ -1.1
CPSF7-221	ENST00000543545	BVES	Q8NE79	360 aa		8.17	□□□□□ -1.1
CPSF7-221	ENST00000543545	OR13C8	Q8NGS7	320 aa		8.17	□□□□□ -1.1
CPSF7-221	ENST00000543545	OR2T10	Q8NGZ9	312 aa		8.17	□□□□□ -1.1
CPSF7-221	ENST00000543545	OR51H1	Q8NH63	302 aa		8.17	□□□□□ -1.1
CPSF7-221	ENST00000543545	GPHA2	Q96T91	129 aa		8.17	□□□□□ -1.1
CPSF7-221	ENST00000543545	RSRP1	Q9BUV0	290 aa		8.17	□□□□□ -1.1
CPSF7-221	ENST00000543545	PRDM13	Q9H4Q3	707 aa		8.17	□□□□□ -1.1
CPSF7-221	ENST00000543545	SLC35D1	Q9NTN3	355 aa		8.17	□□□□□ -1.1
CPSF7-221	ENST00000543545	SLC2A8	Q9NY64	477 aa		8.17	□□□□□ -1.1
CPSF7-221	ENST00000543545	PITPNC1	Q9UKF7	332 aa		8.17	□□□□□ -1.1
CPSF7-221	ENST00000543545	FAM240B	A0A1B0GVZ2	78 aa		8.16	□□□□□ -1.1
CPSF7-221	ENST00000543545	DNAJC9-AS1	A6NH13	148 aa		8.16	□□□□□ -1.1
CPSF7-221	ENST00000543545		H0YJW9	148 aa		8.16	□□□□□ -1.1
CPSF7-221	ENST00000543545	FCGR3B	O75015	233 aa		8.16	□□□□□ -1.1
CPSF7-221	ENST00000543545	PEX14	O75381	377 aa		8.16	□□□□□ -1.1
CPSF7-221	ENST00000543545	VENTX	O95231	258 aa		8.16	□□□□□ -1.1
CPSF7-221	ENST00000543545	MOS	P00540	346 aa		8.16	□□□□□ -1.1
CPSF7-221	ENST00000543545	IGLV2-14	P01704	120 aa		8.16	□□□□□ -1.1
CPSF7-221	ENST00000543545	RLN1	P04808	185 aa		8.16	□□□□□ -1.1
CPSF7-221	ENST00000543545	CTSD	P07339	412 aa	Predicted RBP	8.16	□□□□□ -1.1
CPSF7-221	ENST00000543545	RRAS	P10301	218 aa		8.16	□□□□□ -1.1
CPSF7-221	ENST00000543545	TMEM11	P17152	192 aa		8.16	□□□□□ -1.1
CPSF7-221	ENST00000543545	PIGP	P57054	158 aa		8.16	□□□□□ -1.1
CPSF7-221	ENST00000543545	RPS16	P62249	146 aa	Known RBP	8.16	□□□□□ -1.1
CPSF7-221	ENST00000543545	IFITM3	Q01628	133 aa		8.16	□□□□□ -1.1
CPSF7-221	ENST00000543545	TAGLN	Q01995	201 aa	Known RBP	8.16	□□□□□ -1.1
CPSF7-221	ENST00000543545	SURF2	Q15527	256 aa	Predicted RBP	8.16	□□□□□ -1.1
CPSF7-221	ENST00000543545	SLC9A3R2	Q15599	337 aa		8.16	□□□□□ -1.1
CPSF7-221	ENST00000543545	TMED4	Q7Z7H5	227 aa		8.16	□□□□□ -1.1
CPSF7-221	ENST00000543545	TMEM219	Q86XT9	240 aa		8.16	□□□□□ -1.1
CPSF7-221	ENST00000543545	THNSL2	Q86YJ6	484 aa		8.16	□□□□□ -1.1
CPSF7-221	ENST00000543545	LURAP1L	Q8IV03	231 aa		8.16	□□□□□ -1.1
CPSF7-221	ENST00000543545	TMEM86B	Q8N661	226 aa		8.16	□□□□□ -1.1
CPSF7-221	ENST00000543545	CCDC71L	Q8N9Z2	235 aa		8.16	□□□□□ -1.1
CPSF7-221	ENST00000543545	CFHR4	Q92496	578 aa		8.16	□□□□□ -1.1
CPSF7-221	ENST00000543545	RBMXL1	Q96E39	390 aa	Known RBP	8.16	□□□□□ -1.1
CPSF7-221	ENST00000543545	ZNF486	Q96H40	463 aa	Predicted RBP	8.16	□□□□□ -1.1
CPSF7-221	ENST00000543545	SLC25A21	Q9BQT8	299 aa	Predicted RBP	8.16	□□□□□ -1.1
CPSF7-221	ENST00000543545	TCF19	Q9Y242	345 aa		8.16	□□□□□ -1.1
CPSF7-221	ENST00000543545	WASHC3	Q9Y3C0	194 aa		8.16	□□□□□ -1.1
CPSF7-221	ENST00000543545	POMT1	Q9Y6A1	747 aa		8.16	□□□□□ -1.1
CPSF7-221	ENST00000543545	TEP1	Q99973	2627 aa	Known RBP	8.16	□□□□□ -1.1
CPSF7-221	ENST00000543545		A0A0A6YYJ9	748 aa		8.15	□□□□□ -1.1
CPSF7-221	ENST00000543545	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	8.15	□□□□□ -1.1
CPSF7-221	ENST00000543545	NCBP2L	A6PVI3	153 aa	Known RBP	8.15	□□□□□ -1.1
CPSF7-221	ENST00000543545	LINC00473	A8K010	186 aa		8.15	□□□□□ -1.1
CPSF7-221	ENST00000543545	MPPED1	O15442	326 aa		8.15	□□□□□ -1.1
CPSF7-221	ENST00000543545	AKR1C4	P17516	323 aa		8.15	□□□□□ -1.1
CPSF7-221	ENST00000543545	KIR2DS2	P43631	304 aa		8.15	□□□□□ -1.1
CPSF7-221	ENST00000543545	HILS1	P60008	231 aa		8.15	□□□□□ -1.1
CPSF7-221	ENST00000543545	RPL30	P62888	115 aa	Known RBP	8.15	□□□□□ -1.1
CPSF7-221	ENST00000543545	ASAH1	Q13510	395 aa		8.15	□□□□□ -1.1
CPSF7-221	ENST00000543545	RBMS2	Q15434	407 aa	Known RBP	8.15	□□□□□ -1.1
CPSF7-221	ENST00000543545	TBC1D26	Q86UD7	250 aa		8.15	□□□□□ -1.1
CPSF7-221	ENST00000543545	PDPN	Q86YL7	162 aa		8.15	□□□□□ -1.1
CPSF7-221	ENST00000543545	SPAG16	Q8N0X2	631 aa		8.15	□□□□□ -1.1
CPSF7-221	ENST00000543545	OR5AN1	Q8NGI8	311 aa		8.15	□□□□□ -1.1
CPSF7-221	ENST00000543545	ENKUR	Q8TC29	256 aa		8.15	□□□□□ -1.1
CPSF7-221	ENST00000543545	PIFO	Q8TCI5	191 aa		8.15	□□□□□ -1.1
CPSF7-221	ENST00000543545	MRGPRF	Q96AM1	343 aa		8.15	□□□□□ -1.1
CPSF7-221	ENST00000543545	FLYWCH2	Q96CP2	140 aa	Known RBP	8.15	□□□□□ -1.1
CPSF7-221	ENST00000543545	EAF1	Q96JC9	268 aa	Predicted RBP	8.15	□□□□□ -1.1
CPSF7-221	ENST00000543545	CHIA	Q9BZP6	476 aa		8.15	□□□□□ -1.1
CPSF7-221	ENST00000543545	SLC2A9	Q9NRM0	540 aa		8.15	□□□□□ -1.1
CPSF7-221	ENST00000543545	VPREB3	Q9UKI3	123 aa		8.15	□□□□□ -1.1
CPSF7-221	ENST00000543545	TBC1D24	Q9ULP9	559 aa		8.15	□□□□□ -1.1
CPSF7-221	ENST00000543545	GPR132	Q9UNW8	380 aa		8.15	□□□□□ -1.1
CPSF7-221	ENST00000543545	VSIG4	Q9Y279	399 aa		8.15	□□□□□ -1.1
CPSF7-221	ENST00000543545	DSCAML1	Q8TD84	2053 aa		8.15	□□□□□ -1.11
CPSF7-221	ENST00000543545		A6NDX4	124 aa		8.14	□□□□□ -1.11
CPSF7-221	ENST00000543545	FAM90A9P	A6NNJ1	464 aa		8.14	□□□□□ -1.11
CPSF7-221	ENST00000543545	TRIM77	I1YAP6	450 aa		8.14	□□□□□ -1.11
CPSF7-221	ENST00000543545	SHOX	O15266	292 aa		8.14	□□□□□ -1.11
CPSF7-221	ENST00000543545	NDUFB6	O95139	128 aa		8.14	□□□□□ -1.11
CPSF7-221	ENST00000543545	CRYZL1	O95825	349 aa		8.14	□□□□□ -1.11
CPSF7-221	ENST00000543545	CRYBA1	P05813	215 aa		8.14	□□□□□ -1.11
CPSF7-221	ENST00000543545	HABP2	Q14520	560 aa	Predicted RBP	8.14	□□□□□ -1.11
CPSF7-221	ENST00000543545	C11orf88	Q6PI97	169 aa		8.14	□□□□□ -1.11
CPSF7-221	ENST00000543545	SGPP2	Q8IWX5	399 aa		8.14	□□□□□ -1.11
CPSF7-221	ENST00000543545	ZDHHC22	Q8N966	263 aa		8.14	□□□□□ -1.11
CPSF7-221	ENST00000543545	ADAD2	Q8NCV1	583 aa	Known RBP	8.14	□□□□□ -1.11
CPSF7-221	ENST00000543545	OR4S2	Q8NH73	311 aa		8.14	□□□□□ -1.11
CPSF7-221	ENST00000543545	CD300LF	Q8TDQ1	290 aa		8.14	□□□□□ -1.11
CPSF7-221	ENST00000543545	RTBDN	Q9BSG5	229 aa	Predicted RBP	8.14	□□□□□ -1.11
CPSF7-221	ENST00000543545	SLC25A33	Q9BSK2	321 aa		8.14	□□□□□ -1.11
CPSF7-221	ENST00000543545	C5orf66	Q9H5L9	145 aa		8.14	□□□□□ -1.11
CPSF7-221	ENST00000543545	RAB18	Q9NP72	206 aa		8.14	□□□□□ -1.11
CPSF7-221	ENST00000543545	ESM1	Q9NQ30	184 aa		8.14	□□□□□ -1.11
CPSF7-221	ENST00000543545	LIN7C	Q9NUP9	197 aa	Known RBP	8.14	□□□□□ -1.11
CPSF7-221	ENST00000543545	C1RL	Q9NZP8	487 aa		8.14	□□□□□ -1.11

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms